prot_H-paniculata_contig56293.13153.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig56293.13153.1
Unique Nameprot_H-paniculata_contig56293.13153.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length147
Homology
BLAST of mRNA_H-paniculata_contig56293.13153.1 vs. uniprot
Match: A0A0J7K416_LASNI (Lectin receptor kinase n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K416_LASNI)

HSP 1 Score: 121 bits (303), Expect = 2.360e-30
Identity = 66/139 (47.48%), Postives = 90/139 (64.75%), Query Frame = 0
Query:    6 VSKGKPKSAAEALKGPEAEKWRAEMKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDLIETSAPIARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFIKLP 144
            V KG+P S  EA+KGPE EKW+  +  E  A+ +N T        L  GR+ I  KWIFK+KL E+G+V RYKARLVA+G+SQ EG D  ET AP+ R  T+ T+   AA + +E+   D+  A+LN  +EEE+F++LP
Sbjct:  169 VEKGEPVSYEEAIKGPEGEKWKEAINEELDAMEKNSTWTVVKN--LPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQREGIDYEETFAPVVRYETVRTLLAEAAMNKYEIGQFDVKTAFLNGDLEEEIFMELP 305          
BLAST of mRNA_H-paniculata_contig56293.13153.1 vs. uniprot
Match: A0A0J7KM48_LASNI (Integrase catalytic domain-containing protein n=2 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KM48_LASNI)

HSP 1 Score: 121 bits (303), Expect = 4.210e-29
Identity = 66/139 (47.48%), Postives = 90/139 (64.75%), Query Frame = 0
Query:    6 VSKGKPKSAAEALKGPEAEKWRAEMKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDLIETSAPIARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFIKLP 144
            V KG+P S  EA+KGPE EKW+  +  E  A+ +N T        L  GR+ I  KWIFK+KL E+G+V RYKARLVA+G+SQ EG D  ET AP+ R  T+ T+   AA + +E+   D+  A+LN  +EEE+F++LP
Sbjct:  544 VEKGEPVSYEEAIKGPEGEKWKEAINEELDAMEKNSTWTVVKN--LPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQREGIDYEETFAPVVRYETVRTLLAEAAMNKYEIGQFDVKTAFLNGDLEEEIFMELP 680          
BLAST of mRNA_H-paniculata_contig56293.13153.1 vs. uniprot
Match: A0A5E8C1W8_9ASCO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C1W8_9ASCO)

HSP 1 Score: 113 bits (283), Expect = 7.380e-28
Identity = 63/137 (45.99%), Postives = 84/137 (61.31%), Query Frame = 0
Query:   11 PKSAAEALKGPEAEKWRAEMKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDLIETSAPIARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFIKLPLDF 147
            P S  EA+   EAE W      E  +L  NGT E  D   L  GRKAI +KW+FK K K DGS+ RYKARLV  GFSQVEG D  ET AP+ R  T+  V  +AA+  F++  MD++ A+LN  ++E+++++ P  F
Sbjct:   67 PSSFEEAMSSEEAEFWLEACVIEMSSLKRNGTWELVD---LPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGF 200          
BLAST of mRNA_H-paniculata_contig56293.13153.1 vs. uniprot
Match: Q2QTT3_ORYSJ (Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q2QTT3_ORYSJ)

HSP 1 Score: 116 bits (291), Expect = 1.820e-27
Identity = 57/147 (38.78%), Postives = 94/147 (63.95%), Query Frame = 0
Query:    1 NFTEAVSKGKPKSAAEALKGPEAEKWRAEMKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDLIETSAPIARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFIKLPLDF 147
            +FT  +    PKS +EA   P+A+ W+  ++ E  +++ NGT E  +      G K +  KW+FK+KL+ DG++ +YKARLVA+G++Q EGED  +T +P+AR++T+H +  LAA H   +  MD+  A+LN  ++EE+++  P  F
Sbjct:  164 DFTVYLMDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTER---PYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIHVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGF 307          
BLAST of mRNA_H-paniculata_contig56293.13153.1 vs. uniprot
Match: Q6I578_ORYSJ (Putative polyprotein n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q6I578_ORYSJ)

HSP 1 Score: 116 bits (291), Expect = 1.900e-27
Identity = 57/147 (38.78%), Postives = 94/147 (63.95%), Query Frame = 0
Query:    1 NFTEAVSKGKPKSAAEALKGPEAEKWRAEMKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDLIETSAPIARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFIKLPLDF 147
            +FT  +    PKS +EA   P+A+ W+  ++ E  +++ NGT E  +      G K +  KW+FK+KL+ DG++ +YKARLVA+G++Q EGED  +T +P+AR++T+H +  LAA H   +  MD+  A+LN  ++EE+++  P  F
Sbjct:  708 DFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTER---PYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIHVLLSLAASHGLVVHQMDVKTAFLNGELDEEIYMDQPDGF 851          
BLAST of mRNA_H-paniculata_contig56293.13153.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL)

HSP 1 Score: 115 bits (287), Expect = 3.430e-27
Identity = 62/127 (48.82%), Postives = 81/127 (63.78%), Query Frame = 0
Query:   18 LKGPEAEKWRAEMKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDLIETSAPIARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFIKLP 144
            +KGPEAE W+A M  E  +L ENGT +  D   L  GRKA+  KWIFKRKL EDG+V RYKARLVAQGF+Q  G D  E  AP+ R  T   +  +A++    ++  D+  AYLN  +EE +F++ P
Sbjct:    1 MKGPEAELWKAAMDDEMTSLRENGTWQLTD---LPPGRKAVGCKWIFKRKLDEDGNVVRYKARLVAQGFTQKFGTDYDEVFAPVVRQVTFRVLLTVASQRGMVVKHADVKTAYLNGELEESIFMRQP 124          
BLAST of mRNA_H-paniculata_contig56293.13153.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 115 bits (288), Expect = 4.870e-27
Identity = 60/134 (44.78%), Postives = 83/134 (61.94%), Query Frame = 0
Query:   11 PKSAAEALKGPEAEKWRAEMKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDLIETSAPIARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFIKLP 144
            P+S AEA   PE  +W+  M  E   + E GT   ED   L AGR  I  KW+F +K  EDG+++RYKARLVAQG+SQ+ G D  ET AP+ R+ ++     +AA  D E+  MD+  AYLN  +EEE++++ P
Sbjct:  879 PRSVAEAEASPEWAEWKKAMDEEMSVIKEMGTYTKED---LPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQP 1009          
BLAST of mRNA_H-paniculata_contig56293.13153.1 vs. uniprot
Match: A0A5E8BG36_9ASCO (Integrase catalytic domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8BG36_9ASCO)

HSP 1 Score: 115 bits (287), Expect = 6.600e-27
Identity = 65/144 (45.14%), Postives = 87/144 (60.42%), Query Frame = 0
Query:    4 EAVSKGKPKSAAEALKGPEAEKWRAEMKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDLIETSAPIARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFIKLPLDF 147
            E +S   P S  EA+   EAE W      E  +L  NGT E  D   L  GRKAI +KW+FK K K DGS+ RYKARLV  GFSQVEG D  ET AP+ R  T+  V  +AA+  F++  MD++ A+LN  ++E+++++ P  F
Sbjct:  725 ECISYRHPSSFEEAMSSEEAEFWLEACVIEMSSLKRNGTWELVD---LPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGF 865          
BLAST of mRNA_H-paniculata_contig56293.13153.1 vs. uniprot
Match: A0A5E8B7H8_9ASCO (Uncharacterized protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8B7H8_9ASCO)

HSP 1 Score: 115 bits (287), Expect = 6.800e-27
Identity = 65/144 (45.14%), Postives = 87/144 (60.42%), Query Frame = 0
Query:    4 EAVSKGKPKSAAEALKGPEAEKWRAEMKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDLIETSAPIARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFIKLPLDF 147
            E +S   P S  EA+   EAE W      E  +L  NGT E  D   L  GRKAI +KW+FK K K DGS+ RYKARLV  GFSQVEG D  ET AP+ R  T+  V  +AA+  F++  MD++ A+LN  ++E+++++ P  F
Sbjct: 1688 ECISYRHPSSFEEAMSSEEAEFWLEACVIEMSSLKRNGTWELVD---LPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGF 1828          
BLAST of mRNA_H-paniculata_contig56293.13153.1 vs. uniprot
Match: A0A5E8C189_9ASCO (Uncharacterized protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C189_9ASCO)

HSP 1 Score: 115 bits (287), Expect = 6.920e-27
Identity = 65/144 (45.14%), Postives = 87/144 (60.42%), Query Frame = 0
Query:    4 EAVSKGKPKSAAEALKGPEAEKWRAEMKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDLIETSAPIARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFIKLPLDF 147
            E +S   P S  EA+   EAE W      E  +L  NGT E  D   L  GRKAI +KW+FK K K DGS+ RYKARLV  GFSQVEG D  ET AP+ R  T+  V  +AA+  F++  MD++ A+LN  ++E+++++ P  F
Sbjct:  515 ECISYRHPSSFEEAMSSEEAEFWLEACVIEMSSLKRNGTWELVD---LPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGF 655          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig56293.13153.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0J7K416_LASNI2.360e-3047.48Lectin receptor kinase n=1 Tax=Lasius niger TaxID=... [more]
A0A0J7KM48_LASNI4.210e-2947.48Integrase catalytic domain-containing protein n=2 ... [more]
A0A5E8C1W8_9ASCO7.380e-2845.99Reverse transcriptase Ty1/copia-type domain-contai... [more]
Q2QTT3_ORYSJ1.820e-2738.78Retrotransposon protein, putative, Ty1-copia subcl... [more]
Q6I578_ORYSJ1.900e-2738.78Putative polyprotein n=2 Tax=Oryza sativa subsp. j... [more]
A0A182GIT5_AEDAL3.430e-2748.82Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A284QR88_ARMOS4.870e-2744.78Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]
A0A5E8BG36_9ASCO6.600e-2745.14Integrase catalytic domain-containing protein n=1 ... [more]
A0A5E8B7H8_9ASCO6.800e-2745.14Uncharacterized protein n=1 Tax=Saprochaete ingens... [more]
A0A5E8C189_9ASCO6.920e-2745.14Uncharacterized protein n=1 Tax=Saprochaete ingens... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 53..145
e-value: 6.7E-25
score: 88.1
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 10..144
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 10..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig56293contigH-paniculata_contig56293:3..443 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig56293.13153.1mRNA_H-paniculata_contig56293.13153.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig56293 3..443 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig56293.13153.1 ID=prot_H-paniculata_contig56293.13153.1|Name=mRNA_H-paniculata_contig56293.13153.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=147bp
NFTEAVSKGKPKSAAEALKGPEAEKWRAEMKGEWGALVENGTRESEDTGR
LSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDLIETSAP
IARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFIKLPLDF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like