prot_H-paniculata_contig5584.13097.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5584.13097.1
Unique Nameprot_H-paniculata_contig5584.13097.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length82
Homology
BLAST of mRNA_H-paniculata_contig5584.13097.1 vs. uniprot
Match: A0A836CEW5_9STRA (C3H1-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEW5_9STRA)

HSP 1 Score: 116 bits (291), Expect = 1.660e-32
Identity = 51/72 (70.83%), Postives = 58/72 (80.56%), Query Frame = 0
Query:    9 IIENNRKTELCRNWQKGICTYGGRCAFAHGAKELKYRTLREMETAGRIPDASKYRCYPCM--TWVATGSCPY 78
            +IE NRKTELCRNWQ G C YGG+CAFAHG  EL  +TL EME AGRIP+A+++R  PCM  TWVATGSCPY
Sbjct:    4 VIEANRKTELCRNWQNGTCLYGGKCAFAHGQSELTVQTLTEMEKAGRIPNAARFRSNPCMASTWVATGSCPY 75          
BLAST of mRNA_H-paniculata_contig5584.13097.1 vs. uniprot
Match: D7FIR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIR3_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 2.140e-28
Identity = 50/81 (61.73%), Postives = 64/81 (79.01%), Query Frame = 0
Query:    1 KQGRPSQAIIENNRKTELCRNWQKGICTYGGRCAFAHGAKELKYRTLREMETAGRIPDASKYRCYPCMTWVATGSCPYSSR 81
            K+G PS +IIE+NRKTELCRN++ G CT+G RCAFAHG  ++K++TLR++E  GRI DASKY+   C TWVATG+C Y  R
Sbjct:   25 KKGIPSSSIIEHNRKTELCRNYENGSCTFGDRCAFAHGLDDIKHKTLRDLEKEGRIADASKYQACLCQTWVATGTCLYGRR 105          
BLAST of mRNA_H-paniculata_contig5584.13097.1 vs. uniprot
Match: D8LHE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHE0_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 1.930e-27
Identity = 47/80 (58.75%), Postives = 62/80 (77.50%), Query Frame = 0
Query:    3 GRPSQAIIENNRKTELCRNWQKGICTYGG-RCAFAHGAKELKYRTLREMETAGRIPDASKYRCYPCMTWVATGSCPYSSR 81
            G+PS  ++  NRKTE+CRNWQ+G C     +CAFAHG  EL+ ++L +ME  GRIP+ASK+RCYPC+TW+ TG+CPY SR
Sbjct:    2 GKPSLDLVSVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQSLDQMEYTGRIPNASKFRCYPCLTWITTGACPYFSR 81          
BLAST of mRNA_H-paniculata_contig5584.13097.1 vs. uniprot
Match: A0A7S3Q9Y3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q9Y3_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 4.890e-15
Identity = 34/68 (50.00%), Postives = 49/68 (72.06%), Query Frame = 0
Query:   15 KTELCRNWQ-KGICTYGGRCAFAHGAKELKYRTLREMETAGRIPDASKYRCYPCMTWVATGSCPYSSR 81
            KTELCRN+  +  C +G +C +AHGA+ELK   L ++E AG + D   +R +PC+TWVATG+CP+ +R
Sbjct:  423 KTELCRNFNTRRGCQFGDKCNYAHGAQELKLTKLMDLERAGLV-DIEIFRTHPCLTWVATGACPFDTR 489          
BLAST of mRNA_H-paniculata_contig5584.13097.1 vs. uniprot
Match: A0A7S2XMC7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XMC7_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 5.220e-13
Identity = 31/68 (45.59%), Postives = 43/68 (63.24%), Query Frame = 0
Query:   15 KTELCRNWQKG-ICTYGGRCAFAHGAKELKYRTLREMETAGRIPDASKYRCYPCMTWVATGSCPYSSR 81
            KT LC  ++ G  C +   C +AHG  ELKY  L  ME AG + D   +R +PC+TW+ATG+CP+ S+
Sbjct:  309 KTVLCNYYKTGKACPFRSECLYAHGDDELKYTKLMAMENAGLV-DVETFRTHPCLTWIATGACPFDSK 375          
BLAST of mRNA_H-paniculata_contig5584.13097.1 vs. uniprot
Match: D7G0T5_ECTSI (C3H1-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0T5_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 1.910e-10
Identity = 26/45 (57.78%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    4 RPSQAIIENNRKTELCRNWQKGICTYGGRCAFAHGAKELKYRTLR 48
            R  Q IIE NRKT +C++W +G+C +G RCAFAHGAKEL+  T +
Sbjct:   25 RSGQGIIEANRKTAICKHWLQGVCPFGARCAFAHGAKELRNATAK 69          
BLAST of mRNA_H-paniculata_contig5584.13097.1 vs. uniprot
Match: A0A1R2AKH3_9CILI (C3H1-type domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2AKH3_9CILI)

HSP 1 Score: 55.8 bits (133), Expect = 2.510e-8
Identity = 20/33 (60.61%), Postives = 26/33 (78.79%), Query Frame = 0
Query:   15 KTELCRNWQKGICTYGGRCAFAHGAKELKYRTL 47
            KTELCRNWQ G C++ G+C FAHG +EL+ + L
Sbjct:   22 KTELCRNWQNGFCSFNGKCVFAHGKEELREKNL 54          
BLAST of mRNA_H-paniculata_contig5584.13097.1 vs. uniprot
Match: A0A1R2CCR6_9CILI (C3H1-type domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CCR6_9CILI)

HSP 1 Score: 55.1 bits (131), Expect = 5.030e-8
Identity = 20/33 (60.61%), Postives = 26/33 (78.79%), Query Frame = 0
Query:   15 KTELCRNWQKGICTYGGRCAFAHGAKELKYRTL 47
            KTELCRNWQ G C++ G+C FAHG +EL+ + L
Sbjct:   22 KTELCRNWQNGFCSFNGKCVFAHGKEELREKYL 54          
BLAST of mRNA_H-paniculata_contig5584.13097.1 vs. uniprot
Match: A0A0S4IT37_BODSA (Zinc finger protein, putative n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4IT37_BODSA)

HSP 1 Score: 52.0 bits (123), Expect = 2.070e-6
Identity = 20/34 (58.82%), Postives = 26/34 (76.47%), Query Frame = 0
Query:    9 IIENNRKTELCRNWQKGICTYGGRCAFAHGAKEL 42
            I +  RKT++C NW+ G C++G RCAFAHGA EL
Sbjct:   89 IDQAKRKTKMCMNWESGSCSWGDRCAFAHGAVEL 122          
BLAST of mRNA_H-paniculata_contig5584.13097.1 vs. uniprot
Match: A0A328DW27_9ASTE (Uncharacterized protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328DW27_9ASTE)

HSP 1 Score: 53.1 bits (126), Expect = 2.760e-6
Identity = 21/36 (58.33%), Postives = 28/36 (77.78%), Query Frame = 0
Query:    8 AIIENNRKTELCRNWQKGICTYGGRCAFAHGAKELK 43
            A+  NN KT++C N+ KG+CT+G RC FAHGA EL+
Sbjct:  258 ALSANNFKTKVCDNFSKGVCTFGERCHFAHGAAELR 293          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5584.13097.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A836CEW5_9STRA1.660e-3270.83C3H1-type domain-containing protein n=1 Tax=Tribon... [more]
D7FIR3_ECTSI2.140e-2861.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LHE0_ECTSI1.930e-2758.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3Q9Y3_9STRA4.890e-1550.00Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2XMC7_9STRA5.220e-1345.59Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
D7G0T5_ECTSI1.910e-1057.78C3H1-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A1R2AKH3_9CILI2.510e-860.61C3H1-type domain-containing protein n=1 Tax=Stento... [more]
A0A1R2CCR6_9CILI5.030e-860.61C3H1-type domain-containing protein n=1 Tax=Stento... [more]
A0A0S4IT37_BODSA2.070e-658.82Zinc finger protein, putative n=1 Tax=Bodo saltans... [more]
A0A328DW27_9ASTE2.760e-658.33Uncharacterized protein n=3 Tax=Cuscuta sect. Clei... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 13..39
e-value: 1.7E-8
score: 44.2
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 15..38
e-value: 6.8E-11
score: 41.8
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 13..40
score: 15.77
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 66..81
score: 6.305
NoneNo IPR availableGENE3D4.10.1000.10coord: 8..45
e-value: 1.7E-13
score: 51.7
NoneNo IPR availablePANTHERPTHR12547CCCH ZINC FINGER/TIS11-RELATEDcoord: 5..81
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 13..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5584contigH-paniculata_contig5584:155..8182 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5584.13097.1mRNA_H-paniculata_contig5584.13097.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5584 155..8182 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5584.13097.1 ID=prot_H-paniculata_contig5584.13097.1|Name=mRNA_H-paniculata_contig5584.13097.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=82bp
KQGRPSQAIIENNRKTELCRNWQKGICTYGGRCAFAHGAKELKYRTLREM
ETAGRIPDASKYRCYPCMTWVATGSCPYSSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
IPR036855Znf_CCCH_sf