prot_H-paniculata_contig5571.13077.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5571.13077.1
Unique Nameprot_H-paniculata_contig5571.13077.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length435
Homology
BLAST of mRNA_H-paniculata_contig5571.13077.1 vs. uniprot
Match: D7G864_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G864_ECTSI)

HSP 1 Score: 263 bits (671), Expect = 5.740e-80
Identity = 172/410 (41.95%), Postives = 223/410 (54.39%), Query Frame = 0
Query:   59 DTKQKSS----KKVRFNPQMPNAIWIADS--NYDRRSIVVDLSKTPFALFRKDAVLMAKS------NGAQPPP----------RSAVAAC---------------TQSAVASTADGRCLCARQNSPENIELKRLGSSAASRANDTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTDTEDI------SEHSEGCDGDAER-------RSEEPAFYGVWRRESSEGYEELLLSSGVPKRAAAIALRKHPVHIIDHDGSYFRLIVKNGLSKVDNTFFIGDEPREDIVNNQCYEMSMSWVDLCGNGKRNELALSSICRQRGEEVIAIRSLTDGGNRMVLTQVVRRSRDNHVMRAKHYFKRVTDRSELR 418
            D+KQ+      + VRF  Q  +AIW+ADS  +Y+RRSIVVDLSKTPFALFR+DAV+M ++      +   PPP          R+A AAC               + +A  S A      A +  P    L +L  S +S +++                                                                           H+D +D       +E +  C  + ++        +  PAFYGVW+R SSEGYEELLLSSGVPKRA A+A++KHPVHIIDHDGSYFRLIVKNGLSKVDNTFFIGDEP++DI+  Q YE+SM+W  L G+G+ +ELAL+SIC Q GEEVIAIRSL +GG++MVLTQ+VRR  + + +RAKH+FKRVT +SELR
Sbjct:   63 DSKQELDASPRRTVRFPHQPISAIWVADSVLDYNRRSIVVDLSKTPFALFRRDAVMMKQARTSVDPSAPLPPPGPPALSPPRLRAAAAACXXXXXXXXXRSPVGSSDAAADSDASPSPPSAERRRPGGDRLAKLWESESSESSE-------------------------------------------------------------GHTDLETDDTETDWHSDADDCCSVGSGTEEAPPCVVEQQQLRRGSNSEAGSPAFYGVWKRTSSEGYEELLLSSGVPKRAVAMAMKKHPVHIIDHDGSYFRLIVKNGLSKVDNTFFIGDEPKQDIIGKQSYEVSMNWAHLSGHGREDELALTSICHQAGEEVIAIRSLHEGGDQMVLTQIVRRPAEGYEVRAKHFFKRVTSKSELR 411          
BLAST of mRNA_H-paniculata_contig5571.13077.1 vs. uniprot
Match: A0A835YHH8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHH8_9STRA)

HSP 1 Score: 127 bits (320), Expect = 2.210e-28
Identity = 112/415 (26.99%), Postives = 148/415 (35.66%), Query Frame = 0
Query:   57 LEDTKQKSSKKVRFNPQMPNAIWIADSNYDRRSIVVDLSKTPFALFRKDAVLMAKSNGAQPPPRSAVAACTQSAVASTADGRCLCARQNSPENIELKRLGSSAASRANDTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTDTEDISEHSEGCDGDAERRSEE-----------------PAFYGVWRRESSEGYEELLLSSGVPKRAAAIALRKHPVHIIDHDGSYFRLIVKNGLSKVDNTFFIGDEPREDIVNNQCYEMSMSWVDLCGNGKRNELALSSI---CRQRGE------------------------------------EVIAIRSLTDGGNRMVLTQVVRRSRDNHVMRAKHYFKRVTDRS 415
            L +T ++    V F       +  AD +YDRRSI VDL++TP+ALF KD  LM                                   N P     K  G    S +                                                                               D E++    EG   D E R+EE                 P F G+W+R   EG+ ELL  SGVP++AA  A +K PVHIIDHD  YFRLI+KNGL K D  + IGDEPR +      YE+ + W     NG+   L L+SI    +  G                                     E+IA+R+L DGG+ +VL Q+VR+       RA+H FKR+T R+
Sbjct:   88 LVETSKRPKLSVHFAEDPTVVLGYADPDYDRRSIKVDLTRTPYALFHKDYYLM-----------------------------------NRPAEYSPKHTGKEGRSSS----------------------------------------------------------------------------LSDDEEELHTEGEGSSSDDEARAEEVVRQKRMISLERRRALRPNFSGIWKRSRIEGFIELLAFSGVPRKAALAAAQKRPVHIIDHDDDYFRLIIKNGLVKSDAHYIIGDEPRIEKSGATDYEVVLDWGHGTANGRAESLVLTSISVNAKTGGSDSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAIEMIAVRTLEDGGDVLVLQQIVRKPATGEEARARHIFKRITARN 391          
BLAST of mRNA_H-paniculata_contig5571.13077.1 vs. uniprot
Match: A0A836CAN9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAN9_9STRA)

HSP 1 Score: 100 bits (250), Expect = 5.420e-20
Identity = 62/149 (41.61%), Postives = 81/149 (54.36%), Query Frame = 0
Query:  265 PAFYGVWRRESSEGYEELLLSSGVPKRAAAIALRKHPVHIIDHDGSYFRLIVKNGLSKVDNTFFIGDEPREDIVNNQCYEMSMSWVDLCGNGKRNELALSSICRQRGEEVIAIRSLTDGGNRMVLTQVVRRSRDNHVMRAKHYFKRVTD 413
            P F GVW+R   EG+ ELL  SGVP++AA  A ++  VHIIDHD  YFRLIVKNGL+KVD  + I              E                +A ++       E+IA+R+L DGG  +VL Q+VRR       RA+H FKR+T+
Sbjct:  128 PDFSGVWKRARVEGFIELLAFSGVPRKAALSAAQRRAVHIIDHDDDYFRLIVKNGLTKVDGHYII--------------EKLKFXXXXXXXXXXXXIAAAAAPL----EMIAVRTLEDGGATLVLQQIVRRPATGEEARARHIFKRLTE 258          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5571.13077.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G864_ECTSI5.740e-8041.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YHH8_9STRA2.210e-2826.99Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CAN9_9STRA5.420e-2041.61Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012674CalycinGENE3D2.40.128.20coord: 248..411
e-value: 1.9E-10
score: 43.0
IPR012674CalycinSUPERFAMILY50814Lipocalinscoord: 266..350

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5571contigH-paniculata_contig5571:5514..11492 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5571.13077.1mRNA_H-paniculata_contig5571.13077.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5571 5255..12860 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5571.13077.1 ID=prot_H-paniculata_contig5571.13077.1|Name=mRNA_H-paniculata_contig5571.13077.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=435bp
MPTAVNDVVLETKPAAIHADSAKESSIGEAMERAPVARLATRQTMVGRMG
TQCYALLEDTKQKSSKKVRFNPQMPNAIWIADSNYDRRSIVVDLSKTPFA
LFRKDAVLMAKSNGAQPPPRSAVAACTQSAVASTADGRCLCARQNSPENI
ELKRLGSSAASRANDTGATAGTVSGPSVPSLATTSSTEAAASTAVGCSSS
GVAAAAAVAAVAVGLPETTETRQRSQFFGSWDSDESDSAGHTDTEDISEH
SEGCDGDAERRSEEPAFYGVWRRESSEGYEELLLSSGVPKRAAAIALRKH
PVHIIDHDGSYFRLIVKNGLSKVDNTFFIGDEPREDIVNNQCYEMSMSWV
DLCGNGKRNELALSSICRQRGEEVIAIRSLTDGGNRMVLTQVVRRSRDNH
VMRAKHYFKRVTDRSELRKNAGISVSSNIIVTRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012674Calycin