prot_H-paniculata_contig12045.1302.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12045.1302.1
Unique Nameprot_H-paniculata_contig12045.1302.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length121
Homology
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BLAST of mRNA_H-paniculata_contig12045.1302.1 vs. uniprot
Match: D8LNM6_ECTSI (DDE_3 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LNM6_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 6.170e-20
Identity = 48/69 (69.57%), Postives = 53/69 (76.81%), Query Frame = 0 
Query:    1 MLLFALRKGGVSENQSVLQVASTFKISHSKVRDINNHWWDNNTLLETTGEGRGKVTKNDDGRRRRTQDQ 69
            MLLF LRK G SEN++VLQVA TFKI H KVR INNHWWD+  L ETT  GRGK+ K DDGRRR T+ Q
Sbjct:  143 MLLFDLRKEGRSENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAAGRGKMAKEDDGRRRLTEVQ 211
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12045.1302.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNM6_ECTSI6.170e-2069.57DDE_3 domain-containing protein n=3 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12045contigH-paniculata_contig12045:978..1821 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12045.1302.1mRNA_H-paniculata_contig12045.1302.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12045 552..3085 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12045.1302.1 ID=prot_H-paniculata_contig12045.1302.1|Name=mRNA_H-paniculata_contig12045.1302.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=121bp
MLLFALRKGGVSENQSVLQVASTFKISHSKVRDINNHWWDNNTLLETTGE
GRGKVTKNDDGRRRRTQDQGGPALQVYQRRAQSRAPNLLPYGGGVFDGAL
QPKQRGVKPRGRRVAAEARL*
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