prot_H-paniculata_contig5379.12806.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5379.12806.1
Unique Nameprot_H-paniculata_contig5379.12806.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length585
Homology
BLAST of mRNA_H-paniculata_contig5379.12806.1 vs. uniprot
Match: D8LQD6_ECTSI (HIT-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQD6_ECTSI)

HSP 1 Score: 238 bits (608), Expect = 1.420e-67
Identity = 151/325 (46.46%), Postives = 184/325 (56.62%), Query Frame = 0
Query:  237 VMDLLTEDERSRFLREVASGRLGKLIVPWVPWWTHLAGIQEVPRDCYPGDAEGASTAAVAKQSSVAPSKNHNNLASANFSNVTSVTSESCSLVSSASTEPPTPDAHKVSSSFASSSDTPHLRAKPGLSKRNPNVLVAAASPSPTPSFPQSVVSAMNSGFYSQDSGGGDEAC--------------CARHTFAALMANVRRAPDFSTLSAAAPSPALPALAIDLAFAYVLVARLYNGCWCDDPVGAALALVGASPVLRDAATPRSVAEALSACVERAVEGEGVHSRGYAESLRKDVLTLCEDHRKLTCAFQDAWMMTDAAGKLLAP 547
            ++DLLTE+E+ RF REVASGRLGKLIVPWVPWWT  AG+QEV     P  A G ++ ++     V P ++H +                                H V SSFA    TP   A        P             S P+       S F +  SG                    C RH+FAAL++   +AP F+T++A  PSP LPALA DLA+AYVL +RLYNGCWC DPVGA+LALVGASPVL+D ATP +  EAL+ACVERAVEGE    RGYAESL++DVL +C D RKL CAFQDAW+M +AAG+ LAP
Sbjct:  218 MLDLLTEEEKGRFFREVASGRLGKLIVPWVPWWTQAAGVQEVA----PITAGGRTSHSLPPPV-VDPCRHHKH--------------------------------HAVCSSFA----TPPSGAPXXXXXXRP-------------STPEQXXXXXXSEFPASRSGXXXXXXXXXXXXXXXXXXXSCTRHSFAALLSQAFQAPGFTTINAREPSPTLPALATDLAYAYVLTSRLYNGCWCSDPVGASLALVGASPVLKDGATPSTAGEALAACVERAVEGERCGFRGYAESLQQDVLQVCSDPRKLICAFQDAWVMLEAAGRTLAP 488          
BLAST of mRNA_H-paniculata_contig5379.12806.1 vs. uniprot
Match: A0A6H5KU08_9PHAE (HIT-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU08_9PHAE)

HSP 1 Score: 233 bits (595), Expect = 2.470e-64
Identity = 146/312 (46.79%), Postives = 176/312 (56.41%), Query Frame = 0
Query:  236 GVMDLLTEDERSRFLREVASGRLGKLIVPWVPWWTHLAGIQEVPRDCYPGDAEGASTAAVAKQSSVAPSKNHNNLASANFSNVTSVTSESCSLVSSASTEPPTPDAHKVSSSFASSSDTPHLRAKPGLSKRNPNVLVAAASPSPTPSFPQSVVSAMNSGFYSQDSGGGDEACCARHTFAALMANVRRAPDFSTLSAAAPSPALPALAIDLAFAYVLVARLYNGCWCDDPVGAALALVGASPVLRDAATPRSVAEALSACVERAVEGEGVHSRGYAESLRKDVLTLCEDHRKLTCAFQDAWMMTDAAGKLLAP 547
            G++ LLTE+E+ RF REVASGRLGKLIVPWVPWWT  AG+QEV     P  A G ++ ++     V P ++H +                                H V SSF     TP   A PG                                             C RH+FAAL++   +AP FST++A  PSP LPALA DLA+AYVL +RLYNGCWC DPVGA+LALVGASPVL+D ATP +  EAL+ACVERA+EGE    RGYAESLR+DVL +C D RKL CAFQDAW+M +AAG+ LAP
Sbjct:  380 GILGLLTEEEKGRFFREVASGRLGKLIVPWVPWWTQAAGVQEVA----PITAGGRTSHSLPPPV-VDPCRHHKH--------------------------------HAVCSSFG----TPSSGA-PGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTRHSFAALLSQAFQAPGFSTINAREPSPTLPALATDLAYAYVLTSRLYNGCWCSDPVGASLALVGASPVLKDGATPATAGEALAACVERALEGERSGFRGYAESLRQDVLQVCSDPRKLICAFQDAWVMLEAAGRTLAP 649          
BLAST of mRNA_H-paniculata_contig5379.12806.1 vs. uniprot
Match: A0A835ZEE4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEE4_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 4.970e-8
Identity = 51/140 (36.43%), Postives = 71/140 (50.71%), Query Frame = 0
Query:  408 CARHTFAALM--ANVRRAPDFSTLSAAAPSPALPALAIDLAFAYVLVARLYNGCWCDDPVGAALALVGASPVLRDAATPRSVAEALSACVERAVEGEGVHSRGYAESLR----KDVLTLCEDHRKLTCAFQDAWMMTDAA 541
            C+RH  A L+  A++  A D   L++ A SP LP L +D+  +Y  + RLYNGCWC DP+ AA  ++  S VL   A   SVA A+ +C  R     G+ ++G A  L     KD L+L         A  D   +  AA
Sbjct:  157 CSRHAAAQLLQAAHISLASDGLRLTSPAASPLLPHLVLDVLCSYAALMRLYNGCWCCDPLQAAADMLQLSAVLSKDARHASVALAMESCHLRQQALTGI-AKGNATQLSIRALKDALSLLSTQVVTQTALLDLMALFAAA 295          
BLAST of mRNA_H-paniculata_contig5379.12806.1 vs. uniprot
Match: A0A067CML1_SAPPC (HIT-type domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CML1_SAPPC)

HSP 1 Score: 58.5 bits (140), Expect = 1.750e-5
Identity = 24/34 (70.59%), Postives = 27/34 (79.41%), Query Frame = 0
Query:  237 VMDLLTEDERSRFLREVASGRLGKLIVPWVPWWT 270
             +D LT DER++FLREVA GRLGKLI  W PWWT
Sbjct:  145 TLDALTPDERAQFLREVADGRLGKLIALWTPWWT 178          
BLAST of mRNA_H-paniculata_contig5379.12806.1 vs. uniprot
Match: T0Q3L4_SAPDV (HIT-type domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q3L4_SAPDV)

HSP 1 Score: 56.2 bits (134), Expect = 9.690e-5
Identity = 23/33 (69.70%), Postives = 27/33 (81.82%), Query Frame = 0
Query:  238 MDLLTEDERSRFLREVASGRLGKLIVPWVPWWT 270
            +D LT +ER++FLREVA GRLGKLI  W PWWT
Sbjct:  146 LDALTPNERAQFLREVADGRLGKLIALWTPWWT 178          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5379.12806.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LQD6_ECTSI1.420e-6746.46HIT-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KU08_9PHAE2.470e-6446.79HIT-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A835ZEE4_9STRA4.970e-836.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A067CML1_SAPPC1.750e-570.59HIT-type domain-containing protein n=1 Tax=Saprole... [more]
T0Q3L4_SAPDV9.690e-569.70HIT-type domain-containing protein n=1 Tax=Saprole... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039646Zinc finger HIT domain-containing protein 2PANTHERPTHR15555ZINC FINGER HIT DOMAIN CONTAINING PROTEIN 2 PROTEIN FON -RELATEDcoord: 79..550

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5379contigH-paniculata_contig5379:4823..8339 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5379.12806.1mRNA_H-paniculata_contig5379.12806.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5379 4823..8339 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5379.12806.1 ID=prot_H-paniculata_contig5379.12806.1|Name=mRNA_H-paniculata_contig5379.12806.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=585bp
VHGSGCTEAFFREHVKRETKLRDAEEQSEYPRRRSIPQQPHKCSPSGSIS
TSTTSTTGGNPTTVEAAAGTGAGVGGAQERRAQMVEVLRRLRHSSNNRHE
GTNTSKNMSSPASSLLSSFSSTEGDDCWCKGSATRVHPNAIAGGEERDND
GALPAILPDKRLEALAQALGAFDLSGAGAAIAPKTSPPARDGGVVAGGEG
AEEARRGEGWAGARPAAAAGSYDGDSGTIAERDGCGVMDLLTEDERSRFL
REVASGRLGKLIVPWVPWWTHLAGIQEVPRDCYPGDAEGASTAAVAKQSS
VAPSKNHNNLASANFSNVTSVTSESCSLVSSASTEPPTPDAHKVSSSFAS
SSDTPHLRAKPGLSKRNPNVLVAAASPSPTPSFPQSVVSAMNSGFYSQDS
GGGDEACCARHTFAALMANVRRAPDFSTLSAAAPSPALPALAIDLAFAYV
LVARLYNGCWCDDPVGAALALVGASPVLRDAATPRSVAEALSACVERAVE
GEGVHSRGYAESLRKDVLTLCEDHRKLTCAFQDAWMMTDAAGKLLAPPNN
SATAVNGGKKDNTITAASGKGKDKSQKKKAARELG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039646ZNHIT2