prot_H-paniculata_contig5372.12796.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5372.12796.1
Unique Nameprot_H-paniculata_contig5372.12796.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1633
Homology
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BLAST of mRNA_H-paniculata_contig5372.12796.1 vs. uniprot
Match: A0A6H5L009_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L009_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 4.880e-9
Identity = 33/50 (66.00%), Postives = 37/50 (74.00%), Query Frame = 0 
Query:    1 MRLSCLYCARMKRKCSGGDPCELCIRRRKTCTRSVRRKSGPMKGAKYAPR 50
            +R SC YC R+KR C G +PC LC RR K CTRS R+KSGP KG KYAPR
Sbjct:   10 LRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPR 59
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BLAST of mRNA_H-paniculata_contig5372.12796.1 vs. uniprot
Match: D7FPF9_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF9_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 4.900e-9
Identity = 33/50 (66.00%), Postives = 37/50 (74.00%), Query Frame = 0 
Query:    1 MRLSCLYCARMKRKCSGGDPCELCIRRRKTCTRSVRRKSGPMKGAKYAPR 50
            +R SC YC R+KR C G +PC LC RR K CTRS R+KSGP KG KYAPR
Sbjct:   18 LRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPR 67
[Close]
BLAST of mRNA_H-paniculata_contig5372.12796.1 vs. uniprot
Match: A0A6H5L7F3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F3_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 1.390e-8
Identity = 32/50 (64.00%), Postives = 38/50 (76.00%), Query Frame = 0 
Query:    1 MRLSCLYCARMKRKCSGGDPCELCIRRRKTCTRSVRRKSGPMKGAKYAPR 50
            +R SC  C R+KR C G  PC+LC+RRR+TCTRSV+RKSGP KG KY  R
Sbjct:   34 LRKSCDLCVRLKRACDGQSPCQLCLRRRETCTRSVKRKSGPAKGTKYTTR 83
[Close]
BLAST of mRNA_H-paniculata_contig5372.12796.1 vs. uniprot
Match: D8LPZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ9_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 1.940e-8
Identity = 32/53 (60.38%), Postives = 41/53 (77.36%), Query Frame = 0 
Query:    1 MRLSCLYCARMKRKCSGGDPCELCIRRRKTCTRSVRRKSGPMKGAKYAPRQNK 53
            +R SC  C R+KR C G +PC LC+RRR+TCTRSV+RKSGP KG KY  R+++
Sbjct:   62 LRKSCDLCVRLKRACDGKNPCHLCLRRRETCTRSVKRKSGPAKGTKYTTRRSR 114
[Close]
BLAST of mRNA_H-paniculata_contig5372.12796.1 vs. uniprot
Match: A0A6H5JII0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JII0_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 4.400e-6
Identity = 30/43 (69.77%), Postives = 32/43 (74.42%), Query Frame = 0 
Query:   11 MKRKCSGGDPCELCIRRRKTCTRSVRRKSGPMKGAKYAPRQNK 53
            MKR C GG PC LC RR K C R +RRKSGP KGAKYAPR+ K
Sbjct:    1 MKRACDGGSPCALCSRRGKVCERRLRRKSGPAKGAKYAPRRRK 43
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5372.12796.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L009_9PHAE4.880e-966.00Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7FPF9_ECTSI4.900e-966.00Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5L7F3_9PHAE1.390e-864.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPZ9_ECTSI1.940e-860.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JII0_9PHAE4.400e-669.77Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 4..36
e-value: 1.9E-4
score: 21.5
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 2..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5372contigH-paniculata_contig5372:2162..9881 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5372.12796.1mRNA_H-paniculata_contig5372.12796.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5372 2109..13433 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5372.12796.1 ID=prot_H-paniculata_contig5372.12796.1|Name=mRNA_H-paniculata_contig5372.12796.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1633bp
MRLSCLYCARMKRKCSGGDPCELCIRRRKTCTRSVRRKSGPMKGAKYAPR
QNKRAPNGTRQQQKQKQIKDAGGVVEEEGEEEEEQEEQKGTGACAASETA
RNKNSSKKPSQRKHQRQEHDSDHYDLSNHSSSSNDVKPPTTKRRPGRTTT
MTGRGGGTGSSNGSRIVTSSGSDGGKNVPSKKTPGDNSADQPSSFPRSGA
VDKEGEITPERKDAATSKVAAVATGATRTPSVSLPPFKKRPAASMASSAS
AAAAAAAASCSDSSDDTSSEGPKQQVCKKRRAGKMSSYPTGIGGGGNSPN
SQNENLSAVENSRSSSAGGDRRESDSAPFVVVSLESASKRSESAIVYSNG
HSPRGRAQQRGGSERGGRESRSPSLARQGGHHPSPADHRASGNIHYSTAP
STGALSWEETRDGDSREFSPPWPAHKRKMSISPSSFSAAAAARRYHHSDA
RALYPTTNGNTQGTGPTMLPEGGEARGWWVAAPSGDRTILAPPPSGTAAC
SDRDFPASAIKRERPLDLSARQRWGGREQEYDERGDRRGSVDCAESGRGW
WREESEACGGGGGGRESPPGSNAGRMWKPAARVGRANDYLLPPMRMPDGP
GRFELEPPIVSQLSPSQTPCGLPTPLLPPKELLRMLRPKDYDAINAMLNC
SRGNRGAHPPMQTLLHQAGELGGLQRRKGEARRHHDHFCGQLSTSSQRID
CNSSKEYGAKASWSGMPGGGDNVLVSQSALTLHPPSGLYRYNNEDVAQQG
GEVGGNEYHQRRDGCQNMDKEDDRQRRLFLHNTPFPQTTSGCYFDQRKDK
FVASISARDGEFSTACNNTAGISPMQHALEEKIAHKVMDPGAATALTRRL
VVGNSNTGGSGGGGDQRAWDPREGTFKRGGMPTQHQQYCRPRSHNAVGLL
ARAGWEEKNRQAARCEGSKDDTAVRGRSSGAYPRTSNNVVQGDNFAAAAG
HQRFTKEGNSSSTPSSEHEYERAYHQNHRAGLRSGGGSGGVSTAANGDGK
HALTPAGRDGTAGGPKEAGRSGSAAGSSESCPSPLMVTRVLPPREGIDPV
ATSAAGERPFQQELVKASRTGGSGGCSGGSDSGRSSSCSWGDKKIDAGGS
ICREKTFVPTGPVADTASDGSKREAISSSPEKNVGETKHPTAAISVSVSI
STSTSAACDRNRVLKMEEETLRNKRSIVRNSWEENNSPKGYIQQQRSAKS
DADYQSIPSAEAVDDPTRDCSAPMMVDGRSDVGGGGGGEQEKHADVHHRG
MVTVRPHVAGGSAYDHQEDWDQKYGAGGGGGGGGGGATVNSPSDGFAHQR
FREVESSVAHRVSITTKVSSISNAESSNGHQQWPYRDSSGETQVDTSSSS
RHERDVDEVSCAGEQTQIQSRYYHHRNNSHPKLLEAAPERNELRFPQQPV
AGPGSGPDRDGSGPVERYHRQPSADGRVLHSGHDSRILPAKIEVLPVRRS
TPGATGQQRGEQQQHAGTAGAGDASRSDGKGTMPSLSWAMRGGKSNNGVP
CADVSPSLMLLGSDDGAGGGRGRDTEPVAVRGRHGGSEGGVGGPVMGANK
TPSWAYVQAGAQEESGGWVEGRLGETTVRHSELVALARVGRKLRHSHTLA
AGALAEVQHRAGGNPNCSRLRHGKSGSHIGGA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf