prot_H-paniculata_contig53688.12790.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig53688.12790.1
Unique Nameprot_H-paniculata_contig53688.12790.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length47
Homology
BLAST of mRNA_H-paniculata_contig53688.12790.1 vs. uniprot
Match: A0A6H5JHR9_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHR9_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.910e-12
Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 0
Query:    1 MVFQAIKELKERSGSSLPAIKKYIVTTYPEIASKFAPHQLRAALKKG 47
            MVF AIK LKER GSSLPA+KK I+ TYP +   F PHQ+R+ALKKG
Sbjct:    1 MVFDAIKALKERGGSSLPALKKQIMATYPSL--NFTPHQMRSALKKG 45          
BLAST of mRNA_H-paniculata_contig53688.12790.1 vs. uniprot
Match: D7G4I5_ECTSI (H15 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4I5_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 3.900e-12
Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 0
Query:    1 MVFQAIKELKERSGSSLPAIKKYIVTTYPEIASKFAPHQLRAALKKG 47
            MVF AIK LKER GSSLPA+KK I+ TYP +   F PHQ+R+ALKKG
Sbjct:   12 MVFDAIKALKERGGSSLPALKKQIMATYPSL--NFTPHQMRSALKKG 56          
BLAST of mRNA_H-paniculata_contig53688.12790.1 vs. uniprot
Match: A0A6H5K9S6_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9S6_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 5.230e-11
Identity = 31/47 (65.96%), Postives = 36/47 (76.60%), Query Frame = 0
Query:    1 MVFQAIKELKERSGSSLPAIKKYIVTTYPEIASKFAPHQLRAALKKG 47
            MVF AIK LKER+GSS+ A+KK I  TYP  A  F PHQ+R+ALKKG
Sbjct:    1 MVFDAIKTLKERNGSSIQAMKKSITATYP--ALHFTPHQMRSALKKG 45          
BLAST of mRNA_H-paniculata_contig53688.12790.1 vs. uniprot
Match: D8LQ80_ECTSI (Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ80_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 8.010e-11
Identity = 31/47 (65.96%), Postives = 36/47 (76.60%), Query Frame = 0
Query:    1 MVFQAIKELKERSGSSLPAIKKYIVTTYPEIASKFAPHQLRAALKKG 47
            MVF AIK LKER+GSS+ AIKK I  TYP +   F PHQ+R+ALKKG
Sbjct:   11 MVFDAIKTLKERNGSSIQAIKKSITATYPTL--NFTPHQMRSALKKG 55          
BLAST of mRNA_H-paniculata_contig53688.12790.1 vs. uniprot
Match: D8LQ75_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ75_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 8.190e-11
Identity = 32/47 (68.09%), Postives = 36/47 (76.60%), Query Frame = 0
Query:    1 MVFQAIKELKERSGSSLPAIKKYIVTTYPEIASKFAPHQLRAALKKG 47
            MVF AIK LKER+GSS+ AIKK I  TYP  A  F PHQ+R+ALKKG
Sbjct:    1 MVFDAIKSLKERNGSSIQAIKKSITATYP--ALNFTPHQMRSALKKG 45          
BLAST of mRNA_H-paniculata_contig53688.12790.1 vs. uniprot
Match: A0A6H5KST0_9PHAE (H15 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KST0_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 1.130e-10
Identity = 31/47 (65.96%), Postives = 36/47 (76.60%), Query Frame = 0
Query:    1 MVFQAIKELKERSGSSLPAIKKYIVTTYPEIASKFAPHQLRAALKKG 47
            MVF AIK LKER+GSS+ AIKK I  TYP +   F PHQ+R+ALKKG
Sbjct:    1 MVFDAIKTLKERNGSSIQAIKKSITATYPTL--NFTPHQMRSALKKG 45          
BLAST of mRNA_H-paniculata_contig53688.12790.1 vs. uniprot
Match: A0A6H5KCU1_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCU1_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 6.390e-10
Identity = 31/47 (65.96%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    1 MVFQAIKELKERSGSSLPAIKKYIVTTYPEIASKFAPHQLRAALKKG 47
            MVF AIK LKER+GSS+ AIKK I  TYP +   F PHQ+R ALKKG
Sbjct:  104 MVFDAIKTLKERNGSSIQAIKKSITATYPTL--NFTPHQMRGALKKG 148          
BLAST of mRNA_H-paniculata_contig53688.12790.1 vs. uniprot
Match: D8LMF1_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF1_ECTSI)

HSP 1 Score: 56.6 bits (135), Expect = 1.030e-8
Identity = 29/43 (67.44%), Postives = 33/43 (76.74%), Query Frame = 0
Query:    5 AIKELKERSGSSLPAIKKYIVTTYPEIASKFAPHQLRAALKKG 47
            AI  LKER+GSS+PAIKK+I  TYP +   F PHQLR ALKKG
Sbjct:   11 AILALKERNGSSVPAIKKHIQATYPTL--NFLPHQLRGALKKG 51          
BLAST of mRNA_H-paniculata_contig53688.12790.1 vs. uniprot
Match: A0A7S2Y1F8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1F8_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 3.110e-8
Identity = 29/46 (63.04%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    1 MVFQAIKELKERSGSSLPAIKKYIVTTYPEIASKFAPHQLRAALKK 46
            M   AI  LK+R+GSSLPAIK YI   YP +  KF PH LRAALKK
Sbjct:    7 MAKAAILALKDRTGSSLPAIKAYITANYPSV--KFLPHALRAALKK 50          
BLAST of mRNA_H-paniculata_contig53688.12790.1 vs. uniprot
Match: A0A7S2SPL4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPL4_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 3.840e-7
Identity = 29/47 (61.70%), Postives = 32/47 (68.09%), Query Frame = 0
Query:    1 MVFQAIKELKERSGSSLPAIKKYIVTTYPEIASKFAPHQLRAALKKG 47
            M   A+  LK+RSGSS  AIKKYI   YP +  KFA H LRAALKKG
Sbjct:   24 MTKAALLALKDRSGSSNSAIKKYIEANYPGV--KFAQHSLRAALKKG 68          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig53688.12790.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHR9_9PHAE1.910e-1268.09H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G4I5_ECTSI3.900e-1268.09H15 domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A6H5K9S6_9PHAE5.230e-1165.96H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LQ80_ECTSI8.010e-1165.96Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
D8LQ75_ECTSI8.190e-1168.09H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KST0_9PHAE1.130e-1065.96H15 domain-containing protein n=6 Tax=Ectocarpus T... [more]
A0A6H5KCU1_9PHAE6.390e-1065.96H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LMF1_ECTSI1.030e-867.44H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2Y1F8_9STRA3.110e-863.04Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2SPL4_9STRA3.840e-761.70Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005818Linker histone H1/H5, domain H15PFAMPF00538Linker_histonecoord: 1..47
e-value: 2.6E-14
score: 53.3
IPR005818Linker histone H1/H5, domain H15PROSITEPS51504H15coord: 1..47
score: 20.475
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..47
e-value: 1.2E-13
score: 52.6
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 1..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig53688contigH-paniculata_contig53688:921..1061 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig53688.12790.1mRNA_H-paniculata_contig53688.12790.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig53688 921..1067 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig53688.12790.1 ID=prot_H-paniculata_contig53688.12790.1|Name=mRNA_H-paniculata_contig53688.12790.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=47bp
MVFQAIKELKERSGSSLPAIKKYIVTTYPEIASKFAPHQLRAALKKG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005818Histone_H1/H5_H15
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf