prot_H-paniculata_contig534.12751.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig534.12751.1
Unique Nameprot_H-paniculata_contig534.12751.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length624
Homology
BLAST of mRNA_H-paniculata_contig534.12751.1 vs. uniprot
Match: D8LJK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK4_ECTSI)

HSP 1 Score: 330 bits (845), Expect = 8.940e-101
Identity = 259/667 (38.83%), Postives = 322/667 (48.28%), Query Frame = 0
Query:   19 IAEGVTLLLIVLLSPIWVPR---RLRDARDCLREKRTKVLK-------------------------------DSSTCDALENDLLNQKDAAERNMVPAND-LPDLGRRFLDFLAQGLGQGRAATVTT------------------QYKFIDISVYDEVVLTTEWGADGFLACCMLFAAFTADGRGLTDSLPGGKERPYPLRTVIVGEGRTGAKANRVKEALLLMREMGIIPTGCDVGVFEGSEGPTERAMPEVEMGREREDSDGDAPTQ-------VRESFLASIGRKACELLLWRGRGEKRGVD-REWGXXXXXXXGHVDLLVSKSFSSALGEAGMGDAMRQLGDLDMDRALRMLHRVFVVQLDDLVKCYGFPKTIAPDRTPNLSAAMAGARGVLPSCLRQLVAASNHALLLGFPDKVAMAASTGRYGNEELWWRASEIAGA-VRKEFRSGRVRLSELGACMADLVASDFEALEAAGLSPSSHQAVFRSLDVGMCLSDVAVPWALLCQHRVYWQHFSRLTTTAGKTSPISSAEGRILPWCGGSSDGDIGGVGRSLGGVEGGVYYSSDEYCLCGDACCERGDTTVCSSCMDGKELKLKGGNGGVLKEYGLDERSESREEGDDVQWREGFKGFVATGFADETGERQEDQEAGYADFAAFLGRVLDQMP 623
            + EGV +LLI +LS  W+P    RLR+A  C R +R ++L+                               D  T +     L  Q     ++   A+D  PDLGRR+LDFLAQ LGQ  +A                      +  F+D+S YDEVVLTTEW ADG LA C+LF+  TA+ +    +  G K RPYPLRT+IVGEG    KA++ +EAL  MR   ++P  C V V E  EG  +      + G E                  V  SFL S     C +LL   R   R +  R  G       G        S               +L   D++ AL  ++RV VVQL+DLV+ YGFP+ IAPDRTP L+AA+AGARGVLPSCLR+ +AASNH  L  FPDKVA A   GRY NEEL   AS IA A V +E   GR R++ELGACMADL+ASDFEALE AGLSP + QAVFRSLDVGM LSDVA  WAL+ Q  V W+   R+         IS  +G      G +S G           +EG    +        +      D                              +   R  GD +       GF+ATGFAD   E+ EDQEAGY  FA F+ RVLDQMP
Sbjct:   12 VLEGVLVLLIGVLSTFWLPLPLYRLREAVTC-RRRRLRLLRQSEESGGKVDVGADSKAIRPVGGRGAGNGGVDGQTTEGAAESLTGQD---PKSAAAASDGFPDLGRRYLDFLAQALGQSHSAAAAAIAAPDRRTGLPRNGGGHPEGCFVDVSAYDEVVLTTEWEADGLLAACLLFSVVTAETKRAPFASDGTK-RPYPLRTLIVGEG----KASQAREALEAMRRTKLVPPDCRVDVLEPGEGAAKGEKRREDRGIEXXXXXXXXXXXXXXXXDGVWRSFLGS-----CSMLLLLLRSTLRWLSGRRRGLARGQGEGXXXXXSGHSLRRQWHRRPSAGGDEELSREDVEEALARVNRVLVVQLEDLVRPYGFPRAIAPDRTPTLAAAVAGARGVLPSCLRREIAASNHLALTEFPDKVASAIKAGRYANEELRVTASSIAAAAVAEEPGMGRGRVAELGACMADLIASDFEALEMAGLSPGTQQAVFRSLDVGMALSDVAAAWALVRQDAVCWESCPRVGLDHSAGRLISLGDGARGEETGENSSGRRXXXXXXXDSIEGSAGRAXXXXXDIVE------DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIVVRRTGDGL-CGSCVGGFLATGFADGF-EKLEDQEAGYGAFAVFIVRVLDQMP 656          
BLAST of mRNA_H-paniculata_contig534.12751.1 vs. uniprot
Match: A0A6H5KHY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHY3_9PHAE)

HSP 1 Score: 313 bits (803), Expect = 1.170e-95
Identity = 238/573 (41.54%), Postives = 287/573 (50.09%), Query Frame = 0
Query:  120 YDEVVLTTEWGADGFLACCMLFAAFTADGRGLTDSLPGGKERPYPLRTVIVGEGRTGAKANRVKEALLLMREMGIIPTGCDVGVFEGSEGPTERAMPEVEMGREREDSDGDAPTQVRESFLASIG-----RKACELLLWRGRGEKRGVDRE-----------------------------------WGXXXXXXXG--------HVDLLVSKSFSSAL-GEAGMGDAM-------------------RQLGDLDMDRALRMLHRVFVVQLDDLVKCYGFPKTIAPDRTPNLSAAMAGARGVLPSCLRQLVAASNHALLLGFPDKVAMAASTGRYGNEELWWRASEIAGA-VRKEFRSGRVRLSELGACMADLVASDFEALEAAGLSPSSHQAVFRSLDVGMCLSDVAVPWALLCQHRVYWQHFSRLTTTAGKTSPISSAEGRILPWCGGSSDGDIGGVGRSLGGVEGGVYYSSDEYCLCGDACCERGDTTVCSSCMDGKELKLKGGNGGVLKEYGLDERSESREEGDDVQWREGFKGFVATGFADETGERQEDQEAGYADFAAFLGRVLDQMP 623
            YD+VVLTTEW ADG LA C+LF+  TA+ +    +  G K RPYPLR +IVGEG    KAN+ +EAL  MR   +IP  C V V E  EG  +    + + G E E+ +      V  SFL S       R     L  R RG  R   RE                                   WG       G        H+D+ VS  FS A  G+   G+                      +L   D++ AL  ++RV VVQL+DLV+ YGFP  IAPDRTP L+AA+AGARGVLPSCLR+ +AASNH  L  FPDKVA A   GRY NEEL   AS IA A V +E   GR R++ELGACMADL+ASDFEALE AGLSP + QAVFRSLDVGM LSDVA  WAL+ Q  V W+    +         IS  +G        S  G  G    S G VEG       +    GD   +RGD+   +    GK+   +GG            +      GD +       GF+ATGFAD   ER EDQEAGY  FA F+ RVLDQMP
Sbjct:    3 YDQVVLTTEWEADGLLAACLLFSVVTAETKRAPFASDGTK-RPYPLRNLIVGEG----KANQAREALEAMRRTNLIPPDCRVDVLEAGEGAAKGEKRQEDRGIEAEEEEEGGGDGVWRSFLGSCSVLLLLRSTLRWLFGRRRGLARTKLREVFNATRKDNQRVLVIALKPPRDLVEVLLESGRASWWGRAMGRGGGRRGCSRYKHIDMFVSGGFSGAFRGQREGGECSAPGHSPREQRHRRPSAGGDEELSRDDVEEALARVNRVLVVQLEDLVRPYGFPTAIAPDRTPTLAAAVAGARGVLPSCLRREIAASNHLALTEFPDKVASAIEAGRYANEELRVTASSIAAAAVAEEPGMGRGRVAELGACMADLIASDFEALEMAGLSPGTQQAVFRSLDVGMALSDVAAAWALVRQDAVCWESCPGVGLGHSGGRLISLGDGARREETEDSRSGRRGRRNSSSGSVEGPAGRPRGDD---GDISEDRGDSRRRTR---GKKGDSRGGKREXXXXXXXXXKILVHRTGDGM-CGSCVGGFLATGFADGF-ERLEDQEAGYGAFAVFIVRVLDQMP 562          
BLAST of mRNA_H-paniculata_contig534.12751.1 vs. uniprot
Match: A0A6H5JGT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGT4_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 2.550e-5
Identity = 44/138 (31.88%), Postives = 64/138 (46.38%), Query Frame = 0
Query:    1 MEGWTSTGASLLIYTWCSIAEGVTLLLIVLLSPIWVPR---RLRDARDCLREKRTKVLKDSSTCDALENDLLNQK--------------------DAAERNMV---------PANDLPDLGRRFLDFLAQGLGQGRAA 106
            ME     G++L++  W  + EGV +LLI +LS  W+P    RLR+A  C R +R ++L+ S  C        + K                    + A  ++           A+  PDLGRR+LDFLAQ LGQ  +A
Sbjct:    1 MESDGKGGSALVLLLWYKVLEGVLVLLIGVLSTFWLPLPLYRLREAVTC-RRRRLRLLRQSEECGGKAGGGADSKAIRPVGGREAGNGGGHGHTNEGAAESLTRQEPKSAAAAADGFPDLGRRYLDFLAQALGQSHSA 137          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig534.12751.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LJK4_ECTSI8.940e-10138.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KHY3_9PHAE1.170e-9541.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGT4_9PHAE2.550e-531.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 37..623
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig534contigH-paniculata_contig534:3117..22414 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig534.12751.1mRNA_H-paniculata_contig534.12751.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig534 3117..22448 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig534.12751.1 ID=prot_H-paniculata_contig534.12751.1|Name=mRNA_H-paniculata_contig534.12751.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=624bp
MEGWTSTGASLLIYTWCSIAEGVTLLLIVLLSPIWVPRRLRDARDCLREK
RTKVLKDSSTCDALENDLLNQKDAAERNMVPANDLPDLGRRFLDFLAQGL
GQGRAATVTTQYKFIDISVYDEVVLTTEWGADGFLACCMLFAAFTADGRG
LTDSLPGGKERPYPLRTVIVGEGRTGAKANRVKEALLLMREMGIIPTGCD
VGVFEGSEGPTERAMPEVEMGREREDSDGDAPTQVRESFLASIGRKACEL
LLWRGRGEKRGVDREWGWGSGGGGGHVDLLVSKSFSSALGEAGMGDAMRQ
LGDLDMDRALRMLHRVFVVQLDDLVKCYGFPKTIAPDRTPNLSAAMAGAR
GVLPSCLRQLVAASNHALLLGFPDKVAMAASTGRYGNEELWWRASEIAGA
VRKEFRSGRVRLSELGACMADLVASDFEALEAAGLSPSSHQAVFRSLDVG
MCLSDVAVPWALLCQHRVYWQHFSRLTTTAGKTSPISSAEGRILPWCGGS
SDGDIGGVGRSLGGVEGGVYYSSDEYCLCGDACCERGDTTVCSSCMDGKE
LKLKGGNGGVLKEYGLDERSESREEGDDVQWREGFKGFVATGFADETGER
QEDQEAGYADFAAFLGRVLDQMP*
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