prot_H-paniculata_contig5296.12683.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5296.12683.1
Unique Nameprot_H-paniculata_contig5296.12683.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length252
Homology
BLAST of mRNA_H-paniculata_contig5296.12683.1 vs. uniprot
Match: D7FNF1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNF1_ECTSI)

HSP 1 Score: 307 bits (786), Expect = 7.910e-100
Identity = 156/250 (62.40%), Postives = 196/250 (78.40%), Query Frame = 0
Query:    1 YLVGGSLWLINVMGLEIFAGVPQLETATPIPLLLLGAGLANTLSAIPMANTRSWVLQGLGISLIQLWMAWYVSGAYPASLAVADPWLAAASLAIIVIGGVEAEEAIASDARAKKLVRASGGQWLRRGKVTMRRGDENEGAAINRFGSYANLIFNGPHLYAILVGGGWLDRLAAEYPDTPALLFHGYFALATGSSLALLAPTLYARKLIDAKTMLAMQFLTAAPLVSSLVDATVMGSTATNNPLDIYLGFL 250
            Y+ GGSL+L+ V+G+E+F G PQL+T + +PL +LG G  NT S+IPMANTRSWVL GL +S +QLW AWYVSGAYPASLA ADPWLAAA+L+++VI  VEAEE I ++ R ++++   G +  R GK+ +R  D  EG A+NR GSY +LIFN PHLYA LVG GW++RL   +PD+PALLFH Y ALAT +S+A LAPTLY R+LIDAK M +MQFLT AP V SL+DA+VMG+ ATNNP+DIYLGFL
Sbjct:  199 YIAGGSLYLLGVIGMELFTGTPQLDTTSALPLCVLGFGALNTFSSIPMANTRSWVLSGLCLSTMQLWNAWYVSGAYPASLAPADPWLAAANLSLLVIACVEAEEQILAEKRQREILAQKGRR--RTGKIHIRGDDHVEGDAMNRAGSYGSLIFNAPHLYATLVGSGWVERLGEAFPDSPALLFHAYVALATSTSIAFLAPTLYQRRLIDAKMMSSMQFLTFAPAVMSLIDASVMGAAATNNPIDIYLGFL 446          
BLAST of mRNA_H-paniculata_contig5296.12683.1 vs. uniprot
Match: A0A0G4EV39_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EV39_VITBC)

HSP 1 Score: 105 bits (261), Expect = 1.690e-22
Identity = 90/267 (33.71%), Postives = 133/267 (49.81%), Query Frame = 0
Query:    1 YLVGGSLWLINVM-----GLEIFAGVPQ---LETATPIPLLLLGAGLANTLSAIPM------ANTRSWVLQGLGISLIQLWMAWYVSGAYPASLAVADPWLAAASLAIIVIGGVEAEEAIASDARAKKLVRASGGQWLRRGKVTMRRGDEN-EGAAINRFGSYANLIFNGPHLYAILVGGG-WLDRLAAEYPDTPALLFHGYFALATGSSLALLAPTLYARKLIDAKTMLAMQFLTAAPLVSSLVDATVMG-STATNNPLDIYLGFL 250
            Y+  G LW +  M     GL+     P    L  A  + + LL  G+ N +S  PM      A +  +   G+G++L+ +W A +VSG YP SL  A   + A  L +I+ G   AE A+ SD     L   S    L R +      +   E   I+R  SY NL+   P L+ +LVGG  WLDR+   +P    LL+H  F +A  +++  L  TL  RKL+ ++  +A+Q +  AP  S++VD  V G  T + NPLD+Y GF+
Sbjct:  158 YIGLGGLWFLWEMVGPSLGLQQLVPPPSPYDLWQADALSVALLLVGVLNCVSCAPMSKHMSPAKSEGFEGLGVGMTLLGVWEALWVSGFYPPSLEWATDGIGAVFLFMILRGIYTAERALESD-----LAMISAKYALGRIRTPGAFAEARLESMVIHRIASYPNLLHT-PILWNMLVGGREWLDRVLDTFPAESILLYHAAFGMALANAIVFLGATLQHRKLMTSRQWIALQLVVLAPFWSTVVDCLVYGPETVSVNPLDMYAGFI 418          
BLAST of mRNA_H-paniculata_contig5296.12683.1 vs. uniprot
Match: F0YC96_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC96_AURAN)

HSP 1 Score: 79.0 bits (193), Expect = 3.470e-13
Identity = 86/282 (30.50%), Postives = 129/282 (45.74%), Query Frame = 0
Query:    1 YLVGGSLWLI--NVMGLEIFAGVPQLETATPIPLLLLGAGLANTLSAIPMANTRS-------------WVLQGLGISLIQLWMAWYVSGAYPASLAVADP--WLAAASLA--------IIVIGGVEAEEAIASDARAKKLVRASGGQW--LRRGKVTMRRGDENEGAAINRFGSYANL---IFNGPHLYAILVGGG--WLDRLAAEYPDTPALLFHGYFALATGSSLALLAPTLYARKLIDAKTMLAMQFLTA-APLVSSLVDATVMGSTATNNPLDIYLGF 249
            +LVG  LWL+  +         V       P+   LL AG+AN L+AIPMA   S             +   G G++L+ +W+A + SG YPA+L  A P  +L  AS+         I++    EA E       A K +   GG+   L R   T    + NE A + R  S+ NL   +F    LY++ +     W   +   YP+   L +H  FA A G +L++ + TL  RKL+  +  L +  +    P+VS  +D  ++G T T NPLD +  F
Sbjct:  144 FLVGAPLWLLYSHATAAGHLDAVATWRFDGPLETSLLVAGVANALTAIPMARFSSNKMFDVTDLKANGFTFGGAGLTLMSIWIAAWFSGGYPAALLPAGPAFFLLWASVCAGTTLNWEIMLQQNFEAAE------EANKEMATRGGRKTDLERKFKTATPEELNEKAILYRLASWPNLTQLLF----LYSLCLPDAAMWWAGVVERYPNQGVLGYHYGFASAVGYALSMFSETLRDRKLVSLRVDLIILVVGVFLPMVSVGLDGVLLGDTVTVNPLDYWRQF 415          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5296.12683.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FNF1_ECTSI7.910e-10062.40Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A0G4EV39_VITBC1.690e-2233.71Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
F0YC96_AURAN3.470e-1330.50Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 180..203
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 74..84
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..14
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 204..251
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 148..168
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..73
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 108..147
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 48..53
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 169..179
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..47
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..107
NoneNo IPR availableTMHMMTMhelixcoord: 182..204
NoneNo IPR availableTMHMMTMhelixcoord: 145..167
NoneNo IPR availableTMHMMTMhelixcoord: 27..46
NoneNo IPR availableTMHMMTMhelixcoord: 53..75
NoneNo IPR availableTMHMMTMhelixcoord: 85..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5296contigH-paniculata_contig5296:8980..9735 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5296.12683.1mRNA_H-paniculata_contig5296.12683.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5296 8980..9735 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5296.12683.1 ID=prot_H-paniculata_contig5296.12683.1|Name=mRNA_H-paniculata_contig5296.12683.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=252bp
YLVGGSLWLINVMGLEIFAGVPQLETATPIPLLLLGAGLANTLSAIPMAN
TRSWVLQGLGISLIQLWMAWYVSGAYPASLAVADPWLAAASLAIIVIGGV
EAEEAIASDARAKKLVRASGGQWLRRGKVTMRRGDENEGAAINRFGSYAN
LIFNGPHLYAILVGGGWLDRLAAEYPDTPALLFHGYFALATGSSLALLAP
TLYARKLIDAKTMLAMQFLTAAPLVSSLVDATVMGSTATNNPLDIYLGFL
S*
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