prot_H-paniculata_contig5274.12653.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5274.12653.1
Unique Nameprot_H-paniculata_contig5274.12653.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length115
Homology
BLAST of mRNA_H-paniculata_contig5274.12653.1 vs. uniprot
Match: A0A6H5JV56_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV56_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 2.990e-28
Identity = 58/112 (51.79%), Postives = 77/112 (68.75%), Query Frame = 0
Query:    2 KSTTGSMFFLAKGLVYFSSSLQRITATSSTEVEFIALATCTKQGTHLSNLLMELGWAQLSKAKVLCDNKGVLHLASNANFSSRSKHIAIRFAALREWFKDNRLIIDHVSSQH 113
            KS TGSM FLA  L+YFSS +QRI A SS+E EF  + +  K G + S+L+ ELGW+QL K K+L D +  L L SN  FS+RS+HI++R+ ALR W   +R+ +DHV S H
Sbjct:  744 KSVTGSMVFLAGDLIYFSSRVQRIVAQSSSEGEFFTINSTAKHGVYFSSLMGELGWSQLLKFKLLTDTRSALSLFSNGTFSNRSRHISVRYEALRGWVSSSRIALDHVPSSH 855          
BLAST of mRNA_H-paniculata_contig5274.12653.1 vs. uniprot
Match: UPI0018F811EF (secreted RxLR effector protein 161-like n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=UPI0018F811EF)

HSP 1 Score: 83.6 bits (205), Expect = 1.270e-17
Identity = 45/113 (39.82%), Postives = 65/113 (57.52%), Query Frame = 0
Query:    2 KSTTGSMFFLAKGLVYFSSSLQRITATSSTEVEFIALATCTKQGTHLSNLLMELGWAQLSKAKVLCDNKGVLHLASNANFSSRSKHIAIRFAALREWFKDNRLIIDHVSSQHQ 114
            KST G MF L+ G++ ++S  Q +   S+TEVEF+A A+C+ Q   L  LL ELG+ Q     + CD+   + L+ N+     SKHI +RF  LR+  KD  + + H  SQ Q
Sbjct:   63 KSTMGYMFMLSSGVICWASKKQPVVTLSTTEVEFLATASCSCQAVWLRRLLEELGYVQHEAIVIYCDSSSAIKLSRNSIMHGHSKHIDVRFYFLRDLSKDGMVKMVHCRSQEQ 175          
BLAST of mRNA_H-paniculata_contig5274.12653.1 vs. uniprot
Match: A0A6H5KC04_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC04_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 3.360e-17
Identity = 43/110 (39.09%), Postives = 67/110 (60.91%), Query Frame = 0
Query:    2 KSTTGSMFFLAKGLVYFSSSLQRITATSSTEVEFIALATCTKQGTHLSNLLMELGWAQLSKAKVLCDNKGVLHLASNANFSSRSKHIAIRFAALREWFKDNRLIIDHVSS 111
            +STTG +FFL  GL+ + +  Q + A ++ E E  AL+   ++  ++SN + E+G+       +  D+ G L +ASNA FSSR+KHIA+RF  LRE  K +R+ + H  S
Sbjct:  159 RSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPS 268          
BLAST of mRNA_H-paniculata_contig5274.12653.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 1.180e-16
Identity = 43/110 (39.09%), Postives = 67/110 (60.91%), Query Frame = 0
Query:    2 KSTTGSMFFLAKGLVYFSSSLQRITATSSTEVEFIALATCTKQGTHLSNLLMELGWAQLSKAKVLCDNKGVLHLASNANFSSRSKHIAIRFAALREWFKDNRLIIDHVSS 111
            +STTG +FFL  GL+ + +  Q + A ++ E E  AL+   ++  ++SN + E+G+       +  D+ G L +ASNA FSSR+KHIA+RF  LRE  K +R+ + H  S
Sbjct:  596 RSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPS 705          
BLAST of mRNA_H-paniculata_contig5274.12653.1 vs. uniprot
Match: A0A6H5K4S9_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4S9_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 1.200e-16
Identity = 43/110 (39.09%), Postives = 67/110 (60.91%), Query Frame = 0
Query:    2 KSTTGSMFFLAKGLVYFSSSLQRITATSSTEVEFIALATCTKQGTHLSNLLMELGWAQLSKAKVLCDNKGVLHLASNANFSSRSKHIAIRFAALREWFKDNRLIIDHVSS 111
            +STTG +FFL  GL+ + +  Q + A ++ E E  AL+   ++  ++SN + E+G+       +  D+ G L +ASNA FSSR+KHIA+RF  LRE  K +R+ + H  S
Sbjct:  755 RSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPS 864          
BLAST of mRNA_H-paniculata_contig5274.12653.1 vs. uniprot
Match: A0A4Y1RY62_PRUDU (NAD(P)-binding Rossmann-fold superfamily protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RY62_PRUDU)

HSP 1 Score: 84.3 bits (207), Expect = 1.210e-16
Identity = 45/113 (39.82%), Postives = 67/113 (59.29%), Query Frame = 0
Query:    2 KSTTGSMFFLAKGLVYFSSSLQRITATSSTEVEFIALATCTKQGTHLSNLLMELGWAQLSKAKVLCDNKGVLHLASNANFSSRSKHIAIRFAALREWFKDNRLIIDHVSSQHQ 114
            KST+G +F +    + +SS  Q I A S+TE E++ALA+   Q   L ++L E+G  Q    K+ CDNK  ++L+ N  F S+SKHI I+F  +RE  KD  + + +  SQ Q
Sbjct:  842 KSTSGYVFSIGSSAISWSSKKQSIVALSTTESEYVALASAGCQARWLKSILEEMGQVQEGPTKLFCDNKSAIYLSKNPMFHSKSKHIKIKFHFIRELIKDKEVEVLYCKSQDQ 954          
BLAST of mRNA_H-paniculata_contig5274.12653.1 vs. uniprot
Match: A0A4Y1RM74_PRUDU (Transposable element protein n=7 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RM74_PRUDU)

HSP 1 Score: 84.3 bits (207), Expect = 1.230e-16
Identity = 45/113 (39.82%), Postives = 67/113 (59.29%), Query Frame = 0
Query:    2 KSTTGSMFFLAKGLVYFSSSLQRITATSSTEVEFIALATCTKQGTHLSNLLMELGWAQLSKAKVLCDNKGVLHLASNANFSSRSKHIAIRFAALREWFKDNRLIIDHVSSQHQ 114
            KST+G +F +    + +SS  Q I A S+TE E++ALA+   Q   L ++L E+G  Q    K+ CDNK  ++L+ N  F S+SKHI I+F  +RE  KD  + + +  SQ Q
Sbjct: 1246 KSTSGYVFSIGSSAISWSSKKQSIVALSTTESEYVALASAGCQARWLKSILEEMGQVQEGPTKLFCDNKSAIYLSKNPMFHSKSKHIKIKFHFIRELIKDKEVEVLYCKSQDQ 1358          
BLAST of mRNA_H-paniculata_contig5274.12653.1 vs. uniprot
Match: A0A2I0I8F5_PUNGR (Uncharacterized protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0I8F5_PUNGR)

HSP 1 Score: 80.1 bits (196), Expect = 1.460e-16
Identity = 39/113 (34.51%), Postives = 69/113 (61.06%), Query Frame = 0
Query:    2 KSTTGSMFFLAKGLVYFSSSLQRITATSSTEVEFIALATCTKQGTHLSNLLMELG--WAQLSKAKVLCDNKGVLHLASNANFSSRSKHIAIRFAALREWFKDNRLIIDHVSSQ 112
            K T+G +F +A G++ + S  Q +T TS+TE +F+A    T  G  L + ++ L   ++     K+ CDN   + LA N    SRSKH+ +++ A+RE  K+N+++I+H+S++
Sbjct:   26 KLTSGYIFMMASGVISWRSLSQTLTTTSTTEAKFVACFEATSHGVWLKSFILGLRIFYSIARPLKIHCDNSAAIQLAKNHRSRSRSKHVDVKYLAIREHVKENKVVIEHISTE 138          
BLAST of mRNA_H-paniculata_contig5274.12653.1 vs. uniprot
Match: A0A8J2NFZ8_9HEXA (Hypothetical protein n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2NFZ8_9HEXA)

HSP 1 Score: 82.0 bits (201), Expect = 2.320e-16
Identity = 42/113 (37.17%), Postives = 69/113 (61.06%), Query Frame = 0
Query:    2 KSTTGSMFFLAKGLVYFSSSLQRITATSSTEVEFIALATCTKQGTHLSNLLMELGWAQLSKAKVLCDNKGVLHLASNANFSSRSKHIAIRFAALREWFKDNRLIIDHVSSQHQ 114
            KSTTG+  FL  G++ ++S  Q   A SSTEVE+IALA+   +   L +L+ EL + Q  + ++L DN+  + L  N    SR+KHI +R+  +RE  +D ++ +D++ +  Q
Sbjct:   19 KSTTGTSIFLNDGIMSWTSQKQPCLALSSTEVEYIALASGASEAVLLRSLMQELDFPQSERTQILVDNQTAIRLVKNPEMHSRTKHIDVRYHYIRELVEDEQISVDYIPTTEQ 131          
BLAST of mRNA_H-paniculata_contig5274.12653.1 vs. uniprot
Match: A0A438JSV5_VITVI (Copia protein n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JSV5_VITVI)

HSP 1 Score: 79.0 bits (193), Expect = 5.330e-16
Identity = 44/113 (38.94%), Postives = 70/113 (61.95%), Query Frame = 0
Query:    2 KSTTGSMFFLAKGLVYFSSSLQRITATSSTEVEFIALATCTKQGTHLSNLLMELG-WAQLSKA-KVLCDNKGVLHLASNANFSSRSKHIAIRFAALREWFKDNRLIIDHVSSQ 112
            KST+G +F LA G++ + S  Q +TATS+ EVEFI+    T  G  L + +  L     +S+   + CDN  V+ +  N    SRSKHI I++ A+RE  K+N+++I+H+S++
Sbjct:   39 KSTSGYIFILAGGVISWKSVKQTLTATSTMEVEFISCFEATSHGVWLKSFIFRLRIMDSISRPLSIYCDNLVVVFMKKNNKSGSRSKHINIKYLAIRERVKENKVVIEHISTE 151          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5274.12653.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JV56_9PHAE2.990e-2851.79Integrase catalytic domain-containing protein n=1 ... [more]
UPI0018F811EF1.270e-1739.82secreted RxLR effector protein 161-like n=1 Tax=Tr... [more]
A0A6H5KC04_9PHAE3.360e-1739.09Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF46_9PHAE1.180e-1639.09Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K4S9_9PHAE1.200e-1639.09CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A4Y1RY62_PRUDU1.210e-1639.82NAD(P)-binding Rossmann-fold superfamily protein n... [more]
A0A4Y1RM74_PRUDU1.230e-1639.82Transposable element protein n=7 Tax=Prunus dulcis... [more]
A0A2I0I8F5_PUNGR1.460e-1634.51Uncharacterized protein n=1 Tax=Punica granatum Ta... [more]
A0A8J2NFZ8_9HEXA2.320e-1637.17Hypothetical protein n=1 Tax=Allacma fusca TaxID=3... [more]
A0A438JSV5_VITVI5.330e-1638.94Copia protein n=2 Tax=Vitis vinifera TaxID=29760 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..110
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 2..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5274contigH-paniculata_contig5274:12522..12866 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5274.12653.1mRNA_H-paniculata_contig5274.12653.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5274 12522..13714 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5274.12653.1 ID=prot_H-paniculata_contig5274.12653.1|Name=mRNA_H-paniculata_contig5274.12653.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=115bp
MKSTTGSMFFLAKGLVYFSSSLQRITATSSTEVEFIALATCTKQGTHLSN
LLMELGWAQLSKAKVLCDNKGVLHLASNANFSSRSKHIAIRFAALREWFK
DNRLIIDHVSSQHQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like