prot_H-paniculata_contig5267.12642.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5267.12642.1
Unique Nameprot_H-paniculata_contig5267.12642.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length298
Homology
BLAST of mRNA_H-paniculata_contig5267.12642.1 vs. uniprot
Match: D8LEC5_ECTSI (Tup_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC5_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 7.100e-56
Identity = 105/157 (66.88%), Postives = 117/157 (74.52%), Query Frame = 0
Query:    1 MVAAASIDRIVHVWSTQTHELLHRLDGHTESVYAVTFSHEGDRLVSGGLDKTIK-----VWDLGPSSEGRLSPQAQTLPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLMKKVATVTGFKNSVIGVSASPTNGMFATGSGDNLVCVWNYGER 152
            MVAAASIDR+VHVWSTQTH++LHRLDGH+ESVYA+TFS +G+RLVSGGLDKTIK     VWDLGP SEGRLSPQA+TLPG                               A+LMK+VAT+TGFKNSVIGVSASP N MFATGSGDNLVCVWNYG+R
Sbjct:  642 MVAAASIDRVVHVWSTQTHKILHRLDGHSESVYAITFSADGNRLVSGGLDKTIKASAEMVWDLGPGSEGRLSPQAKTLPGGHKDYVLSVCFSQDGKYIISGSKDRSVTMWDARLMKRVATITGFKNSVIGVSASPFNSMFATGSGDNLVCVWNYGDR 798          
BLAST of mRNA_H-paniculata_contig5267.12642.1 vs. uniprot
Match: A0A6H5JC28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC28_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 1.580e-15
Identity = 40/46 (86.96%), Postives = 43/46 (93.48%), Query Frame = 0
Query:  107 AKLMKKVATVTGFKNSVIGVSASPTNGMFATGSGDNLVCVWNYGER 152
            A+LMK+VAT+TGFKNSVIGVSASP N MFATGSGDNLVCVWNYG R
Sbjct:    4 ARLMKRVATITGFKNSVIGVSASPLNSMFATGSGDNLVCVWNYGVR 49          
BLAST of mRNA_H-paniculata_contig5267.12642.1 vs. uniprot
Match: F4P4P5_BATDJ (Tup_N domain-containing protein (Fragment) n=1 Tax=Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) TaxID=684364 RepID=F4P4P5_BATDJ)

HSP 1 Score: 70.1 bits (170), Expect = 8.840e-10
Identity = 58/192 (30.21%), Postives = 74/192 (38.54%), Query Frame = 0
Query:    2 VAAASIDRIVHVWSTQTHELLHRLDGHTESVYAVTFSHEGDRLVSGGLDKTIKVWDLGPSSE-----GRLSPQAQ--------------------------TLPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLMKKVATVTGFKNSVIGVSASPTNGMFATGSGDNLVCVWNYGERRSTSSRPPGA 162
            VAA +ID  + +W   T +LL R  GH  SVYAV FS  G  LVSG LD+ ++VWD+   +E     G +   A+                            PG                               A     VA V+G +NSVI V+ S   G+ ATGSGD    +W      S S  PP A
Sbjct:  364 VAAGAIDDTIRLWDALTGQLLERFVGHQNSVYAVAFSPTGLSLVSGSLDRNLRVWDISAETEQFLKSGVIPTPAEIAKRHSVVNSKPRHLFRGHKDFILSVAFPGKGSSLDWIVSSSKDRHVTLWDASLDGTNPFSAP----VALVSGHRNSVISVAVSSVGGLLATGSGDMRTRLWRVSCDTSASDVPPSA 551          
BLAST of mRNA_H-paniculata_contig5267.12642.1 vs. uniprot
Match: A0A4V1IUU8_9FUNG (Tup_N domain-containing protein (Fragment) n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4V1IUU8_9FUNG)

HSP 1 Score: 66.6 bits (161), Expect = 1.360e-8
Identity = 54/178 (30.34%), Postives = 78/178 (43.82%), Query Frame = 0
Query:    2 VAAASIDRIVHVWSTQTHELLHRLDGHTESVYAVTFSHEGDRLVSGGLDKTIKVWD----LGPSS--EGRLSPQAQ------------TLP-------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLMKKVA-TVTGFKNSVIGVSASPTNGMFATGSGDNLVCVW 147
            VA+  +D++V +W T T +LL R +GH +SVY+V+FS +G  LVSG LDK++K+      L P    E R++ +A+             LP             G                               + +    A  + G KNSVI V+ SPT G+ ATGSGD    +W
Sbjct:  542 VASGCLDKMVRIWDTATGQLLERFEGHKDSVYSVSFSPDGRSLVSGSLDKSLKLGGGNGHLRPEYRVEARVTTRARHTFVGHRDFVLSLLPPDPSLASIEWIVSGSKDRTVVFWDGQSLLNPQSGGVHQLGPEGEVSDVNSATAFMLQGHKNSVISVAVSPTTGLLATGSGDCRARIW 719          
BLAST of mRNA_H-paniculata_contig5267.12642.1 vs. uniprot
Match: A0A485LC03_9STRA (Aste57867_18943 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LC03_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 6.100e-8
Identity = 71/149 (47.65%), Postives = 94/149 (63.09%), Query Frame = 0
Query:    1 MVAAASIDRIVHVWSTQTHELLHRLDGHTESVYAVTFSHEGDRLVSGGLDKTIKVWDLGPSSEGRLSPQAQTLPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLMKKVATVTGFKNSVIGVSASPTNGMFATGSGDNLVCVWNY 149
            ++AAAS+D++V +W TQT +L+ RL+GH                             +  S+ GR + + ++L  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +  + V TV+G++NSVI V +SP +  FATGSGD   C+W Y
Sbjct:  657 LLAAASLDKVVRIWDTQTTQLMDRLEGHCXXXXXXXXXXXXXXXXXXXXXXXXXXXXV--SASGRTTTRPRSLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRTTRSVLTVSGYRNSVINVHSSPASPYFATGSGDCFACIWKY 803          
BLAST of mRNA_H-paniculata_contig5267.12642.1 vs. uniprot
Match: A0A2S7Q4G7_9HELO (Transcriptional repressor rco-1 protein n=1 Tax=Rutstroemia sp. NJR-2017a BBW TaxID=2070414 RepID=A0A2S7Q4G7_9HELO)

HSP 1 Score: 63.5 bits (153), Expect = 9.980e-8
Identity = 46/154 (29.87%), Postives = 64/154 (41.56%), Query Frame = 0
Query:    2 VAAASIDRIVHVWSTQTHELLHRLDGHTESVYAVTFSHEGDRLVSGGLDKTIKVWDLGPSSE------GRLSPQAQTLPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLMKKVATVTGFKNSVIGVSASPTNGMFATGSGDNLVCVWNY 149
            +A  S D+++ + +    E L   DGHT SVY++ FS     LVSG LDKT+K+W++ P  +       R S    T  G                                +  K    + G KN V  + AS + G FATGSGD    +W Y
Sbjct:  243 LATGSEDKLIRIATGCLVEQLKGRDGHTNSVYSIDFSPNSKSLVSGSLDKTVKIWNISPLQDPYNFDVSRRSSCRSTFKGHEDAVLTAKYTFKSGCILSGSKDKSVRLWD-TRTGKSELVLYGHKNGVTCI-ASRSKGYFATGSGDTTAKIWRY 394          
BLAST of mRNA_H-paniculata_contig5267.12642.1 vs. uniprot
Match: A0A177WEU4_BATDL (Tup_N domain-containing protein n=1 Tax=Batrachochytrium dendrobatidis (strain JEL423) TaxID=403673 RepID=A0A177WEU4_BATDL)

HSP 1 Score: 63.9 bits (154), Expect = 1.180e-7
Identity = 30/62 (48.39%), Postives = 39/62 (62.90%), Query Frame = 0
Query:    2 VAAASIDRIVHVWSTQTHELLHRLDGHTESVYAVTFSHEGDRLVSGGLDKTIKVWDLGPSSE 63
            VAA +ID  + +W   T +LL R  GH  SVYAV FS  G  LVSG LD+ ++VWD+   +E
Sbjct:  724 VAAGAIDDTIRLWDALTGQLLERFVGHQNSVYAVAFSPTGLSLVSGSLDRNLRVWDISAETE 785          
BLAST of mRNA_H-paniculata_contig5267.12642.1 vs. uniprot
Match: A0A6G0XPL3_9STRA (Tup_N domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPL3_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.920e-7
Identity = 71/149 (47.65%), Postives = 93/149 (62.42%), Query Frame = 0
Query:    1 MVAAASIDRIVHVWSTQTHELLHRLDGHTESVYAVTFSHEGDRLVSGGLDKTIKVWDLGPSSEGRLSPQAQTLPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLMKKVATVTGFKNSVIGVSASPTNGMFATGSGDNLVCVWNY 149
            ++AAAS+D++V +W TQT +L+ RL+GH                             +  S+ GR + + + L  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +  + V TV+G++NSVI V +SP +  FATGSGD   C+W Y
Sbjct:  611 LLAAASLDKVVRIWDTQTTQLMDRLEGHCXXXXXXXXXXXXXXXXXXXXXXXXXXXXV--SASGRTTTRPRMLFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRTARSVLTVSGYRNSVINVHSSPASPHFATGSGDCFACIWKY 757          
BLAST of mRNA_H-paniculata_contig5267.12642.1 vs. uniprot
Match: A0A7I8WCJ9_9ANNE (DgyrCDS14033 n=2 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8WCJ9_9ANNE)

HSP 1 Score: 63.2 bits (152), Expect = 2.370e-7
Identity = 26/58 (44.83%), Postives = 40/58 (68.97%), Query Frame = 0
Query:    1 MVAAASIDRIVHVWSTQTHELLHRLDGHTESVYAVTFSHEGDRLVSGGLDKTIKVWDL 58
            ++ +AS D  + VW  +T +LLH L+GHT+ V+  T S +GD +VSGG D T+++W L
Sbjct: 2580 VIVSASHDHTLKVWDLETEKLLHTLNGHTDQVWCCTISSDGDWIVSGGRDGTVRLWKL 2637          
BLAST of mRNA_H-paniculata_contig5267.12642.1 vs. uniprot
Match: A0A1R2BFA5_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BFA5_9CILI)

HSP 1 Score: 62.8 bits (151), Expect = 2.870e-7
Identity = 27/58 (46.55%), Postives = 41/58 (70.69%), Query Frame = 0
Query:    1 MVAAASIDRIVHVWSTQTHELLHRLDGHTESVYAVTFSHEGDRLVSGGLDKTIKVWDL 58
            +VAA S D  V++WST T + ++ L GHT  V  + F++ G+RL++GG+D  +KVWDL
Sbjct:  254 LVAAGSEDSNVYIWSTTTWDKVYTLIGHTSRVRCMNFTNSGNRLITGGIDNLMKVWDL 311          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5267.12642.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEC5_ECTSI7.100e-5666.88Tup_N domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JC28_9PHAE1.580e-1586.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F4P4P5_BATDJ8.840e-1030.21Tup_N domain-containing protein (Fragment) n=1 Tax... [more]
A0A4V1IUU8_9FUNG1.360e-830.34Tup_N domain-containing protein (Fragment) n=1 Tax... [more]
A0A485LC03_9STRA6.100e-847.65Aste57867_18943 protein n=1 Tax=Aphanomyces stella... [more]
A0A2S7Q4G7_9HELO9.980e-829.87Transcriptional repressor rco-1 protein n=1 Tax=Ru... [more]
A0A177WEU4_BATDL1.180e-748.39Tup_N domain-containing protein n=1 Tax=Batrachoch... [more]
A0A6G0XPL3_9STRA1.920e-747.65Tup_N domain-containing protein n=1 Tax=Aphanomyce... [more]
A0A7I8WCJ9_9ANNE2.370e-744.83DgyrCDS14033 n=2 Tax=Dimorphilus gyrociliatus TaxI... [more]
A0A1R2BFA5_9CILI2.870e-746.55Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 93..107
score: 36.5
coord: 2..16
score: 27.81
coord: 44..58
score: 43.13
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 109..148
e-value: 4.0E-5
score: 33.0
coord: 66..106
e-value: 8.5E-10
score: 48.5
coord: 18..57
e-value: 9.3E-12
score: 55.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 74..106
e-value: 3.7E-8
score: 33.9
coord: 111..148
e-value: 0.037
score: 14.9
coord: 21..57
e-value: 2.7E-8
score: 34.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 116..157
score: 10.676
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 74..115
score: 15.521
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 25..58
score: 16.758
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..24
score: 8.67
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..69
e-value: 2.2E-19
score: 71.7
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 70..190
e-value: 1.4E-24
score: 88.5
NoneNo IPR availablePANTHERPTHR42968FAMILY NOT NAMEDcoord: 1..150
NoneNo IPR availablePANTHERPTHR42968:SF17GENERAL TRANSCRIPTIONAL COREPRESSOR TUP1coord: 1..150
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 44..58
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 93..107
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..157
score: 37.808
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5267contigH-paniculata_contig5267:8649..13905 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5267.12642.1mRNA_H-paniculata_contig5267.12642.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5267 8649..13923 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5267.12642.1 ID=prot_H-paniculata_contig5267.12642.1|Name=mRNA_H-paniculata_contig5267.12642.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=298bp
MVAAASIDRIVHVWSTQTHELLHRLDGHTESVYAVTFSHEGDRLVSGGLD
KTIKVWDLGPSSEGRLSPQAQTLPGGHSDYVLSVCFSQDGKYIISGSKDR
SVTIWDAKLMKKVATVTGFKNSVIGVSASPTNGMFATGSGDNLVCVWNYG
ERRSTSSRPPGAATAAGTTPAPAGTAGSERPRSSSPGSSPGEGGKVGNTE
ADGDGSDDSDGGANGKESGKSKSGRSRGDVERGGGGGIVEERGVAAAATA
GKGEGEGSSRSKEGRDKNDGATTTEEQEEDDGATPAAGRNSANSGGKG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf