mRNA_H-paniculata_contig5262.12639.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5262.12639.1 vs. uniprot
Match: A0A6H5KGJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ0_9PHAE) HSP 1 Score: 427 bits (1097), Expect = 4.340e-149 Identity = 216/278 (77.70%), Postives = 236/278 (84.89%), Query Frame = 1
Query: 1 MATDLAALKNYVTAADGEQFSRLPDGVVSINISHSNITARMIELKFDLHQTLADVKGKIYTHSGTNPGMQKLTLRSGGETLCLLDDDSKMLGFYGVQSGMEIHVSDDDPFSLTRGGALEDVSGVEKYRMSEEDYDKRKGTLRSWIKEQKANDPNWVEPWNEKEARLAKAPRDGPPP----GKESVGGMEAGQRCEVQPGGRRGEVEFIGEVEGLQAGFWVGVRFDEPVGRGDGTVKGKRLFVCDKGFGGFVRGKNVTVGDFPERPFDEGDDDEDEDEM 822
MA DLAALK++V AADGEQFSRLP+GVVS+NISHSNITARMIELKFDL QT+ DVKGKIYTH GTNPGMQKL+LRSGG+T+C LDDDSKMLGFYGVQSGMEIHV+DDDPFSLTRGGALED+S V KYRMSEEDYD+R+GTLRSW+KEQKA D WVEP GK+SV G+ QRCEVQPGGRRG VE++GEVEGLQAG+WVGVRFDEPVGRGDGTV+GKRLF C KGFGGFVRGKNVT GDFPERPFDE DDDEDEDE+
Sbjct: 1 MAADLAALKDWVIAADGEQFSRLPEGVVSVNISHSNITARMIELKFDLSQTIGDVKGKIYTHCGTNPGMQKLSLRSGGQTMCQLDDDSKMLGFYGVQSGMEIHVTDDDPFSLTRGGALEDLSRVPKYRMSEEDYDRREGTLRSWVKEQKAKDSTWVEPXXXXXXXXXXXXXXXXXXXXXXGKDSVEGIAVEQRCEVQPGGRRGVVEYVGEVEGLQAGYWVGVRFDEPVGRGDGTVRGKRLFECQKGFGGFVRGKNVTSGDFPERPFDELDDDEDEDEI 278
BLAST of mRNA_H-paniculata_contig5262.12639.1 vs. uniprot
Match: A0A835ZAK6_9STRA (Putative tubulin-specific chaperone B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAK6_9STRA) HSP 1 Score: 346 bits (888), Expect = 2.630e-117 Identity = 175/280 (62.50%), Postives = 211/280 (75.36%), Query Frame = 1
Query: 1 MATDLAALKNYVTAADGEQFSRLPDGVVSINISHSNITARMIELKFDLHQTLADVKGKIYTHSGTNPGMQKLTLRSGGETLCLLDDDSKMLGFYGVQSGMEIHVSDDDPFSLTRGGALEDVSGVEKYRMSEEDYDKRKGTLRSWIKEQKANDPNWVEPWN--------EKEARLAKAPRDGPPPGKESVGGMEAGQRCEVQPGGRRGEVEFIGEVEGLQAGFWVGVRFDEPVGRGDGTVKGKRLFVCDKGFGGFVRGKNVTVGDFPERPF-DEGDDDEDE 813
M+ D+AALK +VTAAD + LP G VS+ ++HSN+ A MIELKFDLHQT+ VK KIYTH GT P QKL LRS G L +L DDS+MLG+YG +SGME+HV D DPFSL+RGG LEDVS V+KYRM++E+YD+RKGTLRSWIKE KA DP WV PWN + +A+ A+AP PPG ESV GM+ G RCEV PGGRRG V F+GEVEG+ G+WVGVRFDEPVGRG+GTVKGK++FV ++ F+R KNV VGD+PE+ DE DD EDE
Sbjct: 1 MSADMAALKGWVTAADANMYKSLPHGTVSLTVTHSNLKATMIELKFDLHQTIESVKRKIYTHCGTKPDSQKLQLRSAGRVLTMLADDSRMLGYYGAESGMEVHVMDTDPFSLSRGGGLEDVSLVQKYRMTDEEYDQRKGTLRSWIKEHKAKDPKWVAPWNGGPTDAQLDAQAKEAEAP----PPGPESVEGMKVGDRCEVSPGGRRGAVMFLGEVEGMAPGYWVGVRFDEPVGRGNGTVKGKQIFVTEEKHASFIRPKNVAVGDYPEKDLLDELDDSEDE 276
BLAST of mRNA_H-paniculata_contig5262.12639.1 vs. uniprot
Match: A0A7S2W9K5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W9K5_9STRA) HSP 1 Score: 322 bits (826), Expect = 1.190e-107 Identity = 155/274 (56.57%), Postives = 201/274 (73.36%), Query Frame = 1
Query: 19 ALKNYVTAADGEQFSRLPDGVVSINISHSNITARMIELKFDLHQTLADVKGKIYTHSGTNPGMQKLTLRSGGETLCLLDDDSKMLGFYGVQSGMEIHVSDDDPFSLTRGGALEDVSGVEKYRMSEEDYDKRKGTLRSWIKEQKANDPNWV---------EPWNEKEARLAKAPRDGPPPGKESVGGMEAGQRCEVQPGGRRGEVEFIGEVEGL--QAGFWVGVRFDEPVGRGDGTVKGKRLFVCDKGFGGFVRGKNVTVGDFPERPFDEGDDDE 807
A+++YVT DG Q+ RLP G+++++ +HSN++ARMIELKFDLH T+ +VK K++ H GT Q+L L+ GG+ +C L DDS+MLGFY V+SGM IH+ D+DP+SL+RGG LED S +EKYRMSE+ YDKRKGT+R WI+EQKA DPNW PW ++ + A P + P G E+V G++ G RCEV PG RRG V F+GEVEGL + G WVGV FDEPVG+ DGTVKG+ +F C GFGGF+RG+N+TVGDFPE D D+DE
Sbjct: 19 AIRDYVTQDDGRQWDRLPQGMIAVHCTHSNVSARMIELKFDLHTTVGEVKSKLHRHCGTPAQFQRLVLKDGGQPICELSDDSRMLGFYSVESGMTIHIIDEDPYSLSRGGGLEDTSLIEKYRMSEDTYDKRKGTVREWIREQKAKDPNWKPPKANMMTGNPWARQDPQAAAEPEEEVPVGPETVEGIKIGDRCEVMPGARRGTVAFVGEVEGLGSKGGHWVGVTFDEPVGKSDGTVKGQTVFECPPGFGGFIRGRNLTVGDFPEEDLDLEDEDE 292
BLAST of mRNA_H-paniculata_contig5262.12639.1 vs. uniprot
Match: A0A7S3UUL1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUL1_HETAK) HSP 1 Score: 304 bits (778), Expect = 1.650e-100 Identity = 158/277 (57.04%), Postives = 196/277 (70.76%), Query Frame = 1
Query: 13 LAALKNYVTAADGEQFSRLPDGVVSINISHSNITARMIELKFDLHQTLADVKGKIYTHSGTNPGMQKLTLRSGGETLCLLDDDSKMLGFYGVQSGMEIHVSDDDPFSLTRGGALEDVSGVEKYRMSEEDYDKRKGTLRSWIKEQKANDPNWVEPWNEKEARLAKAPRDGPP---PGKESVGGMEAGQRCEVQPGGRRGEVEFIGEVEGLQAGFWVGVRFDEPVGRGDGTVKGKRLFVCDKGFGGFVRGKNVTVGDFPERP----FDEGDDDEDEDEM 822
L A++N+VTA D EQ+ LPDGVVS+ ISHSN+ ARM+ELKFDLH ++ VK +I TH GT P Q+L LR GE +C L D MLG+Y V+SGMEIHV DDDP+SL+RGG LEDVS VEKYRM+EEDYD+R GT+R W +++KA DP W W EK+ + DG P PG E+V GM GQRCEV PG RRGE+ F+GEV L+ G WVGVR DEP+G+ DGTVKG+ +F C G F R ++V GDFPER ++ DD E+EDE+
Sbjct: 10 LRAIRNWVTAKDHEQYQNLPDGVVSVTISHSNLQARMMELKFDLHDSIQTVKERIRTHVGTAPQYQRLILRLNGEEICELGDG--MLGYYSVESGMEIHVVDDDPYSLSRGGGLEDVSQVEKYRMTEEDYDRRSGTIRDWARQKKAADPTWFPDW-EKKPTTGSSTGDGEPEEIPGPEAVAGMAVGQRCEVAPGARRGEIAFLGEVPELKPGHWVGVRLDEPLGKHDGTVKGRAVFSCPDKHGTFARPRHVRAGDFPERDPLAELEDDDDSEEEDEI 283
BLAST of mRNA_H-paniculata_contig5262.12639.1 vs. uniprot
Match: A0A7S2D093_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D093_9STRA) HSP 1 Score: 303 bits (777), Expect = 3.480e-100 Identity = 155/286 (54.20%), Postives = 202/286 (70.63%), Query Frame = 1
Query: 1 MATDLAALKNYVTAADGEQFSRLPDGVVSINISHSNITARMIELKFDLHQTLADVKGKIYTHSGTNPGMQKLTLRSGGETLCLLDDDSKMLGFYGVQSGMEIHVSDDDPFSLTRGGALEDVSGVEKYRMSEEDYDKRKGTLRSWIKEQKANDPNWVEPWNEKEARLAKAP-RDGPPP----------GKESVGGMEAGQRCEVQPGGRRGEVEFIGEVEGLQAG-FWVGVRFDEPVGRGDGTVKGKRLFVCDKGFGGFVRGKNVTVGDFPERPFDEGDDDEDEDEM 822
M TD+ +NY+TA D +Q+S LP G+V+I+ +HSN+ +MIELKFDLH T+ D+K +++ H GT Q+L LR GG+ + LDDDSKM+GFY ++SGM IH+ D DPFS++RGG LEDVS ++KY+M +E Y+ RKGT+R WIKEQK DPNW P K+ + P + PPP G E+V GME G RCE QPG RRGE+ ++GEV GL G W+GVRFDEPVGR +G VKG+ +F C + +GGF+RGKNVTVGDFPE D D DE+EDE+
Sbjct: 16 MRTDI---RNYITAGDDQQWSGLPQGMVAIHCTHSNLMKKMIELKFDLHTTIGDLKARLHMHCGTPASAQRLILRDGGQDIAHLDDDSKMMGFYSIESGMTIHIIDTDPFSMSRGGGLEDVSLIQKYKMDDETYEARKGTVRQWIKEQKEADPNWKPP---KQNNFSGNPWQKQPPPAPGAAEEIETGPETVVGMEVGMRCECQPGARRGEIAYVGEVAGLSGGGHWLGVRFDEPVGRSNGVVKGETIFECMERYGGFLRGKNVTVGDFPEAELDLEDTDEEEDEL 295
BLAST of mRNA_H-paniculata_contig5262.12639.1 vs. uniprot
Match: A0A7R9UBU7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBU7_9STRA) HSP 1 Score: 300 bits (767), Expect = 4.640e-99 Identity = 148/274 (54.01%), Postives = 199/274 (72.63%), Query Frame = 1
Query: 1 MATDLAALKNYVTAADGEQFSRLPDGVVSINISHSNITARMIELKFDLHQTLADVKGKIYTHSGTNPGMQKLTLRSGGETLCLLDDDSKMLGFYGVQSGMEIHVSDDDPFSLTRGGALEDVSGVEKYRMSEEDYDKRKGTLRSWIKEQKANDPNWVEPWNEKEARLAKAPRDGPPPGKESVGGMEAGQRCEVQPGGRRGEVEFIGEVEGLQAGFWVGVRFDEPVGRGDGTVKGKRLFVCDKGFGGFVRGKNVTVGDFPERPFDEGDDDEDEDEM 822
MA DLAAL+NYVTA D E+ +RLP VVS+NI+HSN+ +E++FD ++A+VK +++ H GT Q+L LRSGG LDDD++MLG+Y + GME+HV D DP SL++GG LED S +EKYRM+EE YDKR+GTLR W++++KA +P+W+ W +K P D +E + G+E GQRCEV PGGRRG +E++G+V+GL G+W GVRFDEPVG+GDGTVKG+R+F C+ +GGF+R +NV GDFPER E D DEDE+
Sbjct: 1 MAADLAALRNYVTAKDSEEHARLPAHVVSLNITHSNLAQTHMEIRFDRSSSVAEVKQRLHQHCGTPQQYQRLILRSGGTDYAFLDDDTRMLGYYSPEHGMELHVIDLDPHSLSKGGGLEDTSMIEKYRMTEEAYDKREGTLRDWVRKKKAANPDWMPEWEQKSGPRTVDPID---LSEECMKGLELGQRCEVDPGGRRGVLEYLGKVDGLADGYWAGVRFDEPVGKGDGTVKGQRIFDCEARYGGFIRPRNVRCGDFPERDLLE---DSDEDEL 268
BLAST of mRNA_H-paniculata_contig5262.12639.1 vs. uniprot
Match: A0A7S2HN54_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HN54_9STRA) HSP 1 Score: 299 bits (765), Expect = 7.620e-99 Identity = 152/260 (58.46%), Postives = 186/260 (71.54%), Query Frame = 1
Query: 55 QFSRLPDGVVSINISHSNITARMIELKFDLHQTLADVKGKIYTHSGTNPGMQKLTLRSGGETLCLLDDDSKMLGFYGVQSGMEIHVSDDDPFSLTRGGALEDVSGVEKYRMSEEDYDKRKGTLRSWIKEQKANDPNWV---------EPWNEKEARLAKAPRDGPPPGKESVGGMEAGQRCEVQPGGRRGEVEFIGEVEGLQAGFWVGVRFDEPVGRGDGTVKGKRLFVCDKGFGGFVRGKNVTVGDFPERPFDEGDDDE 807
QF+ LP G+VSIN++HSN+ MIELK DLH T+ DVK K++TH GT Q+L LR G+TL LL DDSKMLG+Y V+SGM IHV D DPFSL+RGGALEDVS VE+YRM+++DY+ R+GT+R +I+E+KA DPNW PW +E P ESV G+E G RCEV PG RRGE+ +IGE GL+ GFWVGVRFDEP+G+GDGT KG R F C+ FG FVRGKNVT+GDFPE FD+ +DE
Sbjct: 3 QFAYLPQGMVSINVTHSNLKREMIELKLDLHMTIFDVKRKLHTHCGTPAVHQRLLLRDNGQTLALLADDSKMLGYYSVESGMVIHVDDTDPFSLSRGGALEDVSLVERYRMTDDDYENRRGTVREFIREKKAIDPNWTPPTAGMMTGNPWQRQERPATDGPATEENFDAESVAGLEVGGRCEVMPGARRGEIAYIGE-RGLEKGFWVGVRFDEPMGKGDGTSKGTRYFECEPSFGSFVRGKNVTMGDFPEEGFDDDSEDE 261
BLAST of mRNA_H-paniculata_contig5262.12639.1 vs. uniprot
Match: A0A7S1TNN8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TNN8_9STRA) HSP 1 Score: 290 bits (743), Expect = 2.330e-95 Identity = 148/275 (53.82%), Postives = 192/275 (69.82%), Query Frame = 1
Query: 1 MATDLAALKNYVTAADGEQFSRLPDGVVSINISHSNITARMIELKFDLHQTLADVKGKIYTHSGTNPGMQKLTLRSGGETLCLLDDDSKMLGFYGVQSGMEIHVSDDDPFSLTRGGALEDVSGVEKYRMSEEDYDKRKGTLRSWIKEQKANDPNWVEPWNEKEARLAKAPRDGPPPGKESVGGMEAGQRCEVQPGGRRGEVEFIGEVEGLQAGFWVGVRFDEPVGRGDGTVKGKRLFVCDKGFGGFVRGKNVTVGDFPERPF-DEGDDDEDEDEM 822
MA DLAAL+ YVTA D + +P+ +VS+NISHSN+T + IE+KF+ T+ DVK KI H GT Q LTLRSGG L LDDDS+MLG+Y + GMEI V D DP SL+ G LEDVS VEKYRM+++DYD+R+GTLR W++++KA DPNW W ++ P D E + G+ G+RCE PGGRRG + F+G+V+GL G+W GV+FDEPVG+ DGTVKG R+F C+ FGGF+R +NV GD+PER D+ D D+DEDE+
Sbjct: 1 MAADLAALRGYVTARDEVAYDLIPEHLVSLNISHSNLTQQHIEIKFERRATIGDVKQKIRQHCGTPAQHQVLTLRSGGSNLARLDDDSRMLGYYSPEHGMEIFVLDTDPHSLSTNGGLEDVSLVEKYRMTDDDYDRREGTLRDWVRKKKAEDPNWRPDWEGEKKERTIDPID---LSDECLQGLSVGERCEADPGGRRGVLMFLGQVDGLADGYWAGVKFDEPVGKADGTVKGVRVFDCEPRFGGFIRPRNVKTGDYPERDLLDDSDLDDDEDEL 272
BLAST of mRNA_H-paniculata_contig5262.12639.1 vs. uniprot
Match: K3X7H1_GLOUD (CAP-Gly domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7H1_GLOUD) HSP 1 Score: 288 bits (737), Expect = 1.890e-94 Identity = 145/274 (52.92%), Postives = 198/274 (72.26%), Query Frame = 1
Query: 1 MATDLAALKNYVTAADGEQFSRLPDGVVSINISHSNITARMIELKFDLHQTLADVKGKIYTHSGTNPGMQKLTLRSGGET-LCLLDDDSKMLGFYGVQSGMEIHVSDDDPFSLTRGGALEDVSGVEKYRMSEEDYDKRKGTLRSWIKEQKANDPNWVEPWNEKEARLAKAPRD-GPPPGKESVGGMEAGQRCEVQPGGRRGEVEFIGEVEGLQAGFWVGVRFDEPVGRGDGTVKGKRLFVCDKGFGGFVRGKNVTVGDFP-ERPFDEGDDDEDE 813
MA DL L+NYVTA DG ++ LP+G+V+++I+HSN+ +M++++ DLH T+A+V+ K+Y HSGT P +L + E+ L LDDD KMLG+Y VQSGM +HV D DPFSL++GG LEDVS ++KY +SE+DY+KR+ T+R++ KEQ A DPNW +K + + P D PG E+ GM G RCEVQPGGRRG+V ++GE+ + G+WVGV+FDEP+G+G+GTVKGK F CD + GF+R NVTVGDFP E PF + DD +DE
Sbjct: 1 MAEDLRTLRNYVTAKDGLEYENLPEGMVALHITHSNLRMQMVDIRLDLHLTIAEVRHKVYRHSGTKPDSMELLIMGPDESVLARLDDDRKMLGYYSVQSGMRLHVIDKDPFSLSKGGGLEDVSLIQKYEISEDDYNKREKTVRAYKKEQLAKDPNWKP---KKMMNVTRPPVDPASVPGPETTEGMSVGDRCEVQPGGRRGQVAYLGEIPEIAPGYWVGVKFDEPLGKGNGTVKGKVYFSCDDKYAGFIRPHNVTVGDFPVEDPFADLDDSDDE 271
BLAST of mRNA_H-paniculata_contig5262.12639.1 vs. uniprot
Match: A0A6A3ZRF9_9STRA (CAP-Gly domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ZRF9_9STRA) HSP 1 Score: 286 bits (732), Expect = 1.120e-93 Identity = 147/274 (53.65%), Postives = 195/274 (71.17%), Query Frame = 1
Query: 1 MATDLAALKNYVTAADGEQFSRLPDGVVSINISHSNITARMIELKFDLHQTLADVKGKIYTHSGTNP-GMQKLTLRSGGETLCLLDDDSKMLGFYGVQSGMEIHVSDDDPFSLTRGGALEDVSGVEKYRMSEEDYDKRKGTLRSWIKEQKANDPNWVEPWNEKEARLAKAPRDGPPPGKESVGGMEAGQRCEVQPGGRRGEVEFIGEVEGLQAGFWVGVRFDEPVGRGDGTVKGKRLFVCDKGFGGFVRGKNVTVGDFPER-PF-DEGDDDEDE 813
MA D+ AL+ Y+TA DG Q+ LP+GVV + I+HSN+ +M++++ DLH T+ +++ K+Y H+GT P M+ L +RS G LDDD +MLGFY V++GM +HV D DPFSL+RGG LEDVS V+KY +SEEDY+KR+ T+R++ +EQ A DPNW AR A P PG ESV M+ G RCEVQPGGRRG+V+++GE+ + G+WVGV+FDEPVG+G+G+VKG F C+ FGGFVR NV VGDFP PF D DDD+DE
Sbjct: 1 MAQDMRALRQYITAMDGRQYENLPEGVVCLLITHSNLKLQMMDIRLDLHGTVGELRHKVYQHTGTKPDAMELLVMRSDGSVYARLDDDRRMLGFYSVENGMHLHVVDKDPFSLSRGGGLEDVSLVQKYEISEEDYNKREKTVRAYKREQLAKDPNWKPKTMMNVARPAADPAS--IPGPESVADMKVGDRCEVQPGGRRGQVQYLGEIPEIAPGYWVGVQFDEPVGKGNGSVKGTTYFKCELKFGGFVRPHNVAVGDFPALDPFADLSDDDDDE 272 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5262.12639.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5262.12639.1 >prot_H-paniculata_contig5262.12639.1 ID=prot_H-paniculata_contig5262.12639.1|Name=mRNA_H-paniculata_contig5262.12639.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=275bp MATDLAALKNYVTAADGEQFSRLPDGVVSINISHSNITARMIELKFDLHQback to top mRNA from alignment at H-paniculata_contig5262:484..6490+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5262.12639.1 ID=mRNA_H-paniculata_contig5262.12639.1|Name=mRNA_H-paniculata_contig5262.12639.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6007bp|location=Sequence derived from alignment at H-paniculata_contig5262:484..6490+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5262:484..6490+ >mRNA_H-paniculata_contig5262.12639.1 ID=mRNA_H-paniculata_contig5262.12639.1|Name=mRNA_H-paniculata_contig5262.12639.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1650bp|location=Sequence derived from alignment at H-paniculata_contig5262:484..6490+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |