mRNA_H-paniculata_contig521.12570.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig521.12570.1
Unique NamemRNA_H-paniculata_contig521.12570.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig521.12570.1 vs. uniprot
Match: A0A6H5KK66_9PHAE (Imidazole acetol-phosphate transaminase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KK66_9PHAE)

HSP 1 Score: 578 bits (1491), Expect = 3.380e-201
Identity = 288/364 (79.12%), Postives = 329/364 (90.38%), Query Frame = 1
Query:  373 GSKRSISDLVRANVRELTPYRCARDDYSTGVLLDANENCYGPALPADQGAVDLTGLKLNRYPDPLQLDVKNLLAKIRGVRPEQIFVGVGSDEAIDLLMRIFCRPGEDSILVMPPTYGMYKVSAKVNDVRVQTVPLTPEFEVVVSEVLQTVTPSTKLLFICSPGNPTGKSVPASIVRAIVQGGFDGMIVVDEAYVDFSGYESACSLIDELDRVIVLQTLSKAFGMAAIRMGFAYANEQVIQYMNNVKAPYNVNSLSQEVAVRALSDRSVYKEKVAAILQERTRLQETLRGLSFVKEVKESDANFFLVQVDNAQAIYKRMADDGVVVRFRGNELHCKDCLRITVGTPEENAKLLELLKKTVAAVSA 1464
            G KR +SDLVR+N+++LTPYRCARDDYS GVLLDANEN YGP+L A QG VDL GL LNRYPDP QL+VK LLA++RGVRPEQIFVGVGSDEAIDLL+RIFC PGEDSI+V PP+YGMYKV AKVNDV+ Q VPLTP+++VVVSEVL+  TPS+K+LF+CSPGNPTGKS+PAS+VR IV+GGFDG++VVDEAYVDFSG +SACSLIDELD V+VLQTLSKAFG+AAIRMGFAYANE +IQYMNNVKAPYNVN L+QEVAVRAL DRS+Y+++V  IL ER RLQE LR  SFVKEVKESDANFFLVQVD+AQ IYKRMA++GVVVRFRGNELHCKDCLR+TVGT EEN +LLELL+KTVA +SA
Sbjct:   36 GEKRHMSDLVRSNIQDLTPYRCARDDYSEGVLLDANENSYGPSLVAGQGTVDLEGLDLNRYPDPQQLEVKALLAEMRGVRPEQIFVGVGSDEAIDLLVRIFCTPGEDSIIVTPPSYGMYKVCAKVNDVQTQEVPLTPDYDVVVSEVLRAATPSSKILFLCSPGNPTGKSIPASVVRDIVRGGFDGVVVVDEAYVDFSGKDSACSLIDELDTVVVLQTLSKAFGLAAIRMGFAYANEHIIQYMNNVKAPYNVNRLTQEVAVRALKDRSLYEDRVTTILDERIRLQEALRRYSFVKEVKESDANFFLVQVDHAQEIYKRMANNGVVVRFRGNELHCKDCLRVTVGTAEENNRLLELLEKTVATISA 399          
BLAST of mRNA_H-paniculata_contig521.12570.1 vs. uniprot
Match: A0A836C9P4_9STRA (Imidazole acetol-phosphate transaminase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9P4_9STRA)

HSP 1 Score: 466 bits (1200), Expect = 6.010e-157
Identity = 236/366 (64.48%), Postives = 291/366 (79.51%), Query Frame = 1
Query:  379 KRSISDLVRANVRELTPYRCARDDYSTGVLLDANENCYGPALPADQGAVDLTGLKLNRYPDPLQLDVKNLLAKIRGVRPEQIFVGVGSDEAIDLLMRIFCRPGEDSILVMPPTYGMYKVSAKVNDVRVQTVPLTPEFEVVVSEVLQTVTPSTKLLFICSPGNPTGKSVPASIVRAIVQGGFDGMIVVDEAYVDFS------GYESACSLIDELDRVIVLQTLSKAFGMAAIRMGFAYANEQVIQYMNNVKAPYNVNSLSQEVAVRALSDRSVYKEKVAAILQERTRLQETLRGLSFVKEVKESDANFFLVQVDNAQAIYKRMADDGVVVRFRGNELHCKDCLRITVGTPEENAKLLELLKKTVAAV 1458
            +R++ +L R N+ +LTPYRCARDDY+TG+LLDANEN YG  +      +D+  L+LNRYPDP QL VK LLA+ RGV+ EQIFVGVGSDEAIDLL+RIFC PG+D+IL  PPTYGMYKV AKVNDV VQT PLTPEF V  + +L+ VTP+TK++F+CSPGNPT  SVP  +VR  V   FDG++VVDEAYVDF+      G E+AC+L+  L+RV+VLQTLSKAFGMAAIR+G AYA+  V+Q MNNVKAPYNVN LS+EVA  ALS+ S+Y+++VA +L++R +L ETLR   +V+ V  SDANFFLV++++A  IY  MA++GVVVRFRGNELHC DCLRITVGT EENAKLLELL+ TV  V
Sbjct:   41 RRTLKELARQNILDLTPYRCARDDYNTGILLDANENSYGATISQSVLELDMASLELNRYPDPYQLSVKQLLAEFRGVKTEQIFVGVGSDEAIDLLIRIFCEPGKDAILTTPPTYGMYKVCAKVNDVAVQTAPLTPEFAVDEAALLRAVTPATKMVFLCSPGNPTAVSVPLDVVRR-VHDAFDGIVVVDEAYVDFALAARGGGGETACALVGALERVVVLQTLSKAFGMAAIRVGMAYAHADVVQLMNNVKAPYNVNRLSEEVARTALSNLSLYRQRVAQLLEQRDKLMETLRNEPYVRRVLPSDANFFLVEIEHAHTIYLHMAENGVVVRFRGNELHCTDCLRITVGTAEENAKLLELLRATVKGV 405          
BLAST of mRNA_H-paniculata_contig521.12570.1 vs. uniprot
Match: A0A6V1XHV7_HETAK (Imidazole acetol-phosphate transaminase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1XHV7_HETAK)

HSP 1 Score: 419 bits (1077), Expect = 8.620e-139
Identity = 213/362 (58.84%), Postives = 261/362 (72.10%), Query Frame = 1
Query:  388 ISDLVRANVRELTPYRCARDDYSTGVLLDANENCYGPALPADQGAVDLTGLKLNRYPDPLQLDVKNLLAKIRGVRPEQIFVGVGSDEAIDLLMRIFCRPGEDSILVMPPTYGMYKVSAKVNDVRVQTVPLTPEFEVVVSEVLQTVTPSTKLLFICSPGNPTGKSVPASIVRAIVQGGFDGMIVVDEAYVDFSGYE--SACSLIDELDRVIVLQTLSKAFGMAAIRMGFAYANEQVIQYMNNVKAPYNVNSLSQEVAVRALSDRSVYKEKVAAILQERTRLQETLRGLSFVKEVKESDANFFLVQVDNAQAIYKRMADDGVVVRFRGNELHCKDCLRITVGTPEENAKLLELLKKTVAAVSAA 1467
            + +L R N+  L PYRCARDDY  G+LLDANEN  G  +P          L LNRYPDP    VK L+  IRGVRPEQIF+GVGSDEAIDLLMRIFCRPG D IL  PPTYGMYKV AKVNDV +  VPL+P F+  V E+L  VT  TKLLF+CSPGNPT K++P  +VR I +GG+ G++VVDEAYVDF   E  SAC  +DE  R++VLQTLSKAFG+A IR+G A  + +VI+ MNN K PYN+N L++EVA++AL D S+ +  VA ++ ER R+   L  +  V +V  SDANF L Q+D+AQAIYK MA++G VVRFRGNELHC DC+R TVGT EEN K+LE+L+ T A  + A
Sbjct:   29 LQELARPNILALEPYRCARDDYDEGILLDANENSIGACIPPPDH------LALNRYPDPYMRKVKELIGGIRGVRPEQIFLGVGSDEAIDLLMRIFCRPGADRILTTPPTYGMYKVCAKVNDVAIVEVPLSPAFDARVPEILAGVTADTKLLFLCSPGNPTAKAIPIEVVREIFEGGYRGLVVVDEAYVDFVPKEVGSACQYLDEFPRLVVLQTLSKAFGLAGIRLGMAIGHPEVIRLMNNCKYPYNINKLTEEVALKALGDTSILEANVATLISERARVMAALEAMPAVHKVHPSDANFVLFQIDHAQAIYKDMAENGCVVRFRGNELHCTDCIRATVGTAEENDKMLEMLEATHAKFATA 384          
BLAST of mRNA_H-paniculata_contig521.12570.1 vs. uniprot
Match: A0A7S0XC30_9STRA (Imidazole acetol-phosphate transaminase n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XC30_9STRA)

HSP 1 Score: 395 bits (1015), Expect = 6.390e-130
Identity = 199/347 (57.35%), Postives = 254/347 (73.20%), Query Frame = 1
Query:  397 LVRANVRELTPYRCARDDYSTGVLLDANENCYGPALPADQGAVDLTGLKLNRYPDPLQLDVKNLLAKIRGVRPEQIFVGVGSDEAIDLLMRIFCRPGEDSILVMPPTYGMYKVSAKVNDVRVQTVPLTPEFEVVVSEVLQTVTPSTKLLFICSPGNPTGKSVPASIVRAIVQGGFDGMIVVDEAYVDFSGYESACSLIDELDRVIVLQTLSKAFGMAAIRMGFAYANEQVIQYMNNVKAPYNVNSLSQEVAVRALSDRSVYKEKVAAILQERTRLQETLRGLSFVKEVKESDANFFLVQVDNAQAIYKRMADDGVVVRFRGNELHCKDCLRITVGTPEENAKLLELL 1437
            +VR N+ EL PYRCARDDYS GVLLDANEN  GPA+ ++      + L+LNRYPDPL  DVK  L+  R V+ EQIF+GVGSDEAID+L RIFC P  D++++ PPTYGMYKV AKVND+ ++  PLT EF+V +  +L  +  +TK++++CSPGNPT K +P +IV  ++    +G++VVDEAY+DFSG  SAC+LID+   +IVLQTLSKAFG+A IR+G AY NE +IQ MNNVKAPYNVN L+ +VA+ AL+D + Y + +  IL+ER  L   LR L F+ ++  +DANF L  V  A  IYK MAD GVV RFRG+ELHC DCLR+TVG  EEN K L LL
Sbjct:    2 IVRPNIWELEPYRCARDDYSEGVLLDANENSIGPAVHSN------SSLQLNRYPDPLHFDVKERLSTFRHVKKEQIFLGVGSDEAIDILFRIFCSPKVDNVVITPPTYGMYKVCAKVNDINIKQAPLTSEFDVDLPLLLSAIDINTKIVWLCSPGNPTSKVIPNAIVEDLLSQFTNGVVVVDEAYIDFSGTTSACTLIDKYPNLIVLQTLSKAFGLAGIRLGMAYGNESIIQIMNNVKAPYNVNKLTADVALSALNDLATYHQNLVKILKEREYLLSQLRSLPFITKIHHTDANFILFAVPRAYDIYKTMADRGVVCRFRGSELHCTDCLRVTVGIREENDKFLHLL 342          
BLAST of mRNA_H-paniculata_contig521.12570.1 vs. uniprot
Match: B8BPZ8_THAPS (Imidazole acetol-phosphate transaminase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BPZ8_THAPS)

HSP 1 Score: 394 bits (1013), Expect = 3.320e-129
Identity = 204/363 (56.20%), Postives = 259/363 (71.35%), Query Frame = 1
Query:  397 LVRANVRELTPYRCARDDYSTGVLLDANENCYGP-ALPADQGAVDLTGLKLNRYPDPLQLDVKNLLAKIRG------VRPEQIFVGVGSDEAIDLLMRIFCRPGE------DSILVMPPTYGMYKVSAKVNDVRVQTVPLTPEFEVVVSEVLQTVTPSTKLLFICSPGNPTGKSVPASIVRAIVQG-GFDGMIVVDEAYVDFSGYESACSLIDELDRVIVLQTLSKAFGMAAIRMGFAYANEQVIQYMNNVKAPYNVNSLSQEVAVRALSDRSVYKEKVAAILQERTRLQETLRGLSFVKEVKESDANFFLVQV-DNAQAIYKRMADDGVVVRFRGNELHCKDCLRITVGTPEENAKLLELLK 1440
            + R N+  L PYRCARDDYS+GVLLDANEN  GP +LP++       G+ L RYP P Q  +K+LL   R       ++PE +FVGVGSDEAIDLL+RIFC PG       D+I++ PPTYGMYKV A VNDV +QTVPLTPEF++ + E+L+ VTP TKLLF+CSPGNPT KS+P S VR I     ++G+++VDEAYVDFS  ESA SL+ E D ++VLQTLSKAFG+A IR GFA     VIQ MNNVKAPYNVN L+ + A  AL +  V ++ V  +L++R  +   L GL+FV++V  SDANF L +V   A  +YK MAD GVV RFRGNELHC +C+R+T+GTP+EN + LE+L+
Sbjct:   15 IARPNILSLHPYRCARDDYSSGVLLDANENAMGPTSLPSNSLDPYDNGMMLERYPCPYQRIIKSLLCDYRNSGNGGDIQPENVFVGVGSDEAIDLLIRIFCAPGATSGGEGDAIMITPPTYGMYKVCANVNDVEIQTVPLTPEFDLQIPEILEAVTPKTKLLFLCSPGNPTAKSIPLSDVREIASSPAYNGLVIVDEAYVDFSTTESATSLVTEFDNIVVLQTLSKAFGLAGIRCGFAIGPSDVIQLMNNVKAPYNVNKLTSDAAANALKNTHVLEKNVNEVLEQREEVARKLEGLAFVEKVYPSDANFLLFRVRQKANEVYKMMADKGVVSRFRGNELHCNECIRVTIGTPDENKQFLEMLE 377          
BLAST of mRNA_H-paniculata_contig521.12570.1 vs. uniprot
Match: W7TKC7_9STRA (Imidazole acetol-phosphate transaminase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKC7_9STRA)

HSP 1 Score: 393 bits (1010), Expect = 1.390e-126
Identity = 205/359 (57.10%), Postives = 256/359 (71.31%), Query Frame = 1
Query:  388 ISDLVRANVRELTPYRCARDDYSTGVLLDANENCYGPALPADQGAVDLTGLKLNRYPDPLQLDVKNLLAKIRGVRPEQIFVGVGSDEAIDLLMRIFCRPGEDSILVMPPTYGMYKVSAKVNDVRVQTVPLTPEFEVVVSEVLQTV--TPSTKLLFICSPGNPTGKSVPASIVRAIVQGGFDGMIVVDEAYVDFSGYE--SACSLIDELDRVIVLQTLSKAFGMAAIRMGFAYANEQVIQYMNNVKAPYNVNSLSQEVAVRALS--DRSVYKEKVAAILQERTRLQETLRGLSFVKEVKESDANFFLVQVDNAQAIYKRMADDGVVVRFRGNELHCKDCLRITVGTPEENAKLLELLKKT 1446
            + DLVR N+ EL PYRCARDDYS G+LLDANEN +G ALP +        L+L RYPDP Q  +K  +A  R VRPEQIFVGVGSDEAIDL+MR+FC PG D ILV PPTYGMYKVSAK NDV +  VPLTPEF V V EVLQ V  +P  K++F+CSPGNPT K VP  +V  ++QG    M+VVDEAYVDF+     SAC L+++    +VLQTLSKAFG+A IR G A  +  VIQ +NNVKAPYNV+ L+  +A +  +  + +V ++ V+ IL+E+TR+ E L+GL  VK++  SD NF L +V  AQ IY+ MA+ GVV RFRG+ELHCKDC+R+T+G   EN   L+L KKT
Sbjct:  177 VLDLVRPNIWELEPYRCARDDYSEGILLDANENSFGSALPPEDRV-----LELERYPDPYQQPLKEKIAVFRNVRPEQIFVGVGSDEAIDLIMRVFCEPGRDQILVTPPTYGMYKVSAKTNDVGIVAVPLTPEFAVRVPEVLQAVAVSPRVKVIFLCSPGNPTAKLVPLEVVEQVLQGASGCMVVVDEAYVDFANANAVSACQLVEKYPNCLVLQTLSKAFGLAGIRCGMAIGHPAVIQVLNNVKAPYNVSQLTSHMAHKVFTAENLAVLQQNVSDILKEKTRVVEALQGLPAVKKIHPSDTNFILFEVPRAQEIYRDMAEAGVVARFRGHELHCKDCIRLTIGQAHENDTFLDLFKKT 530          
BLAST of mRNA_H-paniculata_contig521.12570.1 vs. uniprot
Match: A0A7R9UEV3_9STRA (Imidazole acetol-phosphate transaminase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEV3_9STRA)

HSP 1 Score: 379 bits (973), Expect = 4.900e-123
Identity = 188/356 (52.81%), Postives = 248/356 (69.66%), Query Frame = 1
Query:  394 DLVRANVRELTPYRCARDDYSTGVLLDANENCYGPALPADQGAVDLTGLKLNRYPDPLQLDVKNLLAKIRGVRPEQIFVGVGSDEAIDLLMRIFCRPGEDSILVMPPTYGMYKVSAKVNDVRVQTVPLTPEFEVVVSEVLQTVTPSTKLLFICSPGNPTGKSVPASIVRAIVQGGFDGMIVVDEAYVDFSGYESACSLIDELDRVIVLQTLSKAFGMAAIRMGFAYANEQVIQYMNNVKAPYNVNSLSQEVAVRALSDRSVYKEKVAAILQERTRLQETLRGLSFVKEVKESDANFFLVQVDN-AQAIYKRMADDGVVVRFRGNELHCKDCLRITVGTPEENAKLLELLKKTVAAV 1458
            +LVR N+ EL PYRCARDDYS GVLLDANEN YGP L     A     L+L RYP P   ++K  +A+ RGVR EQIF+GVGSDEAIDLL+RIFC PG DS+L+ PPTYGMYKV AKVN+V +Q  PLTP+F++ +  +L     +TK++F+CSPGNPT KS+  + V  +    FDG+I +DEAYVDFS   SA   +D    ++V+QT+SKAFG+AAIR+G A+A+E+++Q  NNVKAPY++N L++E+A R   D +   + +  I +ER R+   L G  FV  V  SD NF L QV   A+ +YK MA+ G VVR+RG++LHC DC+R ++GTPE+N   L LL K  A +
Sbjct:   42 ELVRQNILELQPYRCARDDYSEGVLLDANENAYGPPLDPQDNA-----LELERYPSPYLWELKEKIAEFRGVRKEQIFLGVGSDEAIDLLIRIFCEPGRDSVLITPPTYGMYKVCAKVNNVNLQKAPLTPDFQLDIPGMLAAADETTKVMFVCSPGNPTAKSITHAQVEELCNSSFDGIIALDEAYVDFSADGSALKFLDRYPNLLVMQTMSKAFGLAAIRLGMAFAHEEIVQIFNNVKAPYSINKLTEEIAYRVFDDLTPLYDNIKKIKRERQRVMAALNGYEFVTLVHPSDTNFVLFQVPKVAKEVYKTMAERGCVVRYRGDQLHCDDCIRASIGTPEQNDLFLSLLPKVYAEI 392          
BLAST of mRNA_H-paniculata_contig521.12570.1 vs. uniprot
Match: A0A6U1TZJ3_TRICV (Imidazole acetol-phosphate transaminase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A6U1TZJ3_TRICV)

HSP 1 Score: 378 bits (971), Expect = 7.210e-122
Identity = 198/354 (55.93%), Postives = 248/354 (70.06%), Query Frame = 1
Query:  397 LVRANVRELTPYRCARDDYSTGVLLDANENCYGP-ALPADQGAVDLTGLKLNRYPDPLQLDVKNLLAKIRG--VRPEQIFVGVGSDEAIDLLMRIFCRPGEDSILVMPPTYGMYKVSAKVNDVRVQTVPLTPEFEVVVSEVLQTVTPSTKLLFICSPGNPTGKSVPASIVRAIVQGGFDGMIVVDEAYVDFSGYESACSLIDELDRVIVLQTLSKAFGMAAIRMGFAYANEQVIQYMNNVKAPYNVNSLSQEVAVRALSDRSVYKEKVAAILQERTRLQETLRGLSFVKEVKESDANFFLVQVDN-AQAIYKRMADDGVVVRFRGNELHCKDCLRITVGTPEENAKLLELLKKT 1446
            L R N+  L PYRCARDDYSTGVLLDANEN  GP +LP +        L L RYP P Q+ +K   A  RG  +  E IFVGVGSDEAIDLLMRIFC PG+D+I++ PPTYGMYKV A VNDV +Q V LTPEF++ + E+L  VTP+TKL+F+CSPGNPT K++P S V  +    + G+IVVDEAYVDFS   SA SL+ +   V+V QTLSKAFG+A IR+GFA  +  VIQ MNNVKAPYNVNSL+ EVA+ A+ +       V  +L++R  +   L  L FV +V  SD+NF L ++   AQ +YK MAD GVV R+RGNE HC +C+R+T+G+ EEN K L+LL +T
Sbjct:   98 LARPNILSLHPYRCARDDYSTGVLLDANENALGPTSLPTNSLDPPNNSLNLERYPCPYQVPLKRKYASYRGGGIGVENIFVGVGSDEAIDLLMRIFCAPGKDAIMITPPTYGMYKVCANVNDVEIQKVDLTPEFDLRIPEMLAAVTPATKLMFVCSPGNPTAKAIPLSDVETLATSSYRGIIVVDEAYVDFSDQGSAVSLVKKYPNVVVCQTLSKAFGLAGIRLGFAIGSPDVIQLMNNVKAPYNVNSLTSEVAMNAMENIETLDRNVEELLKQRDVVATRLNELDFVTKVYPSDSNFLLFRLKGEAQQVYKVMADGGVVTRYRGNETHCDECIRVTIGSEEENEKFLKLLVET 451          
BLAST of mRNA_H-paniculata_contig521.12570.1 vs. uniprot
Match: A0A7S2CI78_9STRA (Imidazole acetol-phosphate transaminase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CI78_9STRA)

HSP 1 Score: 370 bits (951), Expect = 2.160e-120
Identity = 192/351 (54.70%), Postives = 245/351 (69.80%), Query Frame = 1
Query:  403 RANVRELTPYRCARDDYSTGVLLDANENCYGP--ALPADQGAVDLTGLKLNRYPDPLQLDVKNLLAKIRGVRPEQIFVGVGSDEAIDLLMRIFCRPGEDSILVMPPTYGMYKVSAKVNDVRVQTVPLTPEFEVVVSEVLQTVTPSTKLLFICSPGNPTGKSVPASIVRAIVQGG-FDGMIVVDEAYVDFSGYESACSLIDELDRVIVLQTLSKAFGMAAIRMGFAYANEQVIQYMNNVKAPYNVNSLSQEVAVRALSDRSVYKEKVAAILQERTRLQETLRGLSFVKEVKESDANFFLVQVDNAQAIYKRMADDGVVVRFRGNELHCKDCLRITVGTPEENAKLLELLKKT 1446
            R N++ LTPYRCARDDY  GVLLDANEN  G   A P D         +LNRYP P Q ++K L+AK R +  EQIF+GVGSDEAID++MRIFC P ED+I++ PPTYGMY V AKVNDV V   PL P F+V +  +   + PSTKL+F+CSPGNPT KS+P + V A++    +DGM+VVDEAYVDFS   SAC L+D+  ++IVLQTLSKAFG+A IR+G A + E  IQY NNVKAPY+VN L+ E+AV A ++  + +  +  IL ERTR+   L GL +V +V  SD NF L  +  A+ +YK MA+ GVV R+RG E+HC  C+R+T+GT  EN   L LL+KT
Sbjct:    1 RENIKTLTPYRCARDDYEEGVLLDANENSIGATVAKPPDTR-------ELNRYPCPYQWELKALIAKHRKIAKEQIFLGVGSDEAIDMMMRIFCVPREDTIVITPPTYGMYGVCAKVNDVEVIKSPLDPLFDVNLESLFADLRPSTKLMFLCSPGNPTAKSIPLATVEAVLNDPRYDGMVVVDEAYVDFSTVPSACCLVDKYPKLIVLQTLSKAFGLAGIRLGMAISQESTIQYFNNVKAPYSVNKLTAEMAVDAFNNLPLLEANIKTILDERTRVAAALEGLPYVSKVHHSDTNFLLFVIPKAKELYKTMAEAGVVTRYRGTEMHCDGCIRVTIGTASENDAFLALLQKT 344          
BLAST of mRNA_H-paniculata_contig521.12570.1 vs. uniprot
Match: A0A7S4J9I7_9STRA (Imidazole acetol-phosphate transaminase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J9I7_9STRA)

HSP 1 Score: 371 bits (953), Expect = 2.430e-120
Identity = 194/360 (53.89%), Postives = 249/360 (69.17%), Query Frame = 1
Query:  397 LVRANVRELTPYRCARDDYSTGVLLDANENCYGP-ALPADQGAVDLTGLKLNRYPDPLQLDVKNLLAKIRG--VRPEQIFVGVGSDEAIDLLMRIFCRPGEDSILVMPPTYGMYKVSAKVNDVRVQTVPLTPEFEVVVSEVLQTVTPSTKLLFICSPGNPTGKSVPASIVRAIVQGGFDGMIVVDEAYVDFSGYESACSLIDELDRVIVLQTLSKAFGMAAIRMGFAYANEQVIQYMNNVKAPYNVNSLSQEVAVRALSDRSVYKEKVAAILQERTRLQETLRGLSFVKEVKESDANFFLVQVDN-AQAIYKRMADDGVVVRFRGNELHCKDCLRITVGTPEENAKLLELLKKTVAAVSA 1464
            L R N+  L PYRCARDDY+ GVLLDANEN  GP ++P +        L L RYP P Q+ +K   A  RG  ++P  IFVGVGSDEAIDLL+RIFC P ED+I+  PPTYGMYKV A VNDV +QT+PLTP+F++ + E+L  VT  TKLLFICSPGNPT K++P S ++ I    + G++VVDEAYVDFS   SA  L+ +   V+VLQTLSKAFG+A IR+GFA   E VIQ MNNVKAPYNVNSL+ EVA+ A+ +       V  +L +R  + + L  L F+ +V  SD+NF L ++ + A+ IYK MAD GVV R+RG+E+HC +C+R+T+G  EEN K +E L K    +SA
Sbjct:   16 LARPNILALHPYRCARDDYNDGVLLDANENALGPTSVPTNSLDPYDNSLTLERYPCPYQIPLKEKYAAYRGHGIKPSNIFVGVGSDEAIDLLIRIFCTPSEDTIMTTPPTYGMYKVCANVNDVEIQTIPLTPDFDLRIPEMLANVTERTKLLFICSPGNPTAKAIPLSDIKKIASSSYQGIVVVDEAYVDFSSKGSAVELVRKYPNVVVLQTLSKAFGLAGIRLGFAIGGEDVIQLMNNVKAPYNVNSLTSEVAMNAMENIDTLDTNVKNLLAQREVVAQKLNDLDFIVKVYPSDSNFLLFRLKSKAKEIYKTMADRGVVTRYRGSEIHCDECIRVTIGKDEENNKFIEELVKVWNDLSA 375          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig521.12570.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KK66_9PHAE3.380e-20179.12Imidazole acetol-phosphate transaminase n=2 Tax=Ec... [more]
A0A836C9P4_9STRA6.010e-15764.48Imidazole acetol-phosphate transaminase n=1 Tax=Tr... [more]
A0A6V1XHV7_HETAK8.620e-13958.84Imidazole acetol-phosphate transaminase n=1 Tax=He... [more]
A0A7S0XC30_9STRA6.390e-13057.35Imidazole acetol-phosphate transaminase n=1 Tax=Ch... [more]
B8BPZ8_THAPS3.320e-12956.20Imidazole acetol-phosphate transaminase n=1 Tax=Th... [more]
W7TKC7_9STRA1.390e-12657.10Imidazole acetol-phosphate transaminase n=2 Tax=Mo... [more]
A0A7R9UEV3_9STRA4.900e-12352.81Imidazole acetol-phosphate transaminase n=1 Tax=Pi... [more]
A0A6U1TZJ3_TRICV7.210e-12255.93Imidazole acetol-phosphate transaminase n=1 Tax=Tr... [more]
A0A7S2CI78_9STRA2.160e-12054.70Imidazole acetol-phosphate transaminase n=1 Tax=Fl... [more]
A0A7S4J9I7_9STRA2.430e-12053.89Imidazole acetol-phosphate transaminase n=2 Tax=Od... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig521contigH-paniculata_contig521:7394..14314 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score583.9
Seed ortholog evalue5.7e-164
Seed eggNOG ortholog2880.D7FPJ8
Preferred nameHIS5
KEGG rclassRC00006,RC00888,RC00945
KEGG koko:K00817,ko:K01814
KEGG ReactionR00694,R00734,R03243,R04640
KEGG Pathwayko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230
KEGG ModuleM00026
Hectar predicted targeting categorychloroplast
GOsGO:0000105,GO:0003674,GO:0003824,GO:0004400,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0010035,GO:0010038,GO:0010045,GO:0016053,GO:0016740,GO:0016769,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046483,GO:0050896,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
EggNOG free text desc.histidinol-phosphate transaminase activity
EggNOG OGsCOG0079@1,KOG0633@2759
EC2.6.1.9,5.3.1.16
COG Functional cat.E
BiGG ReactioniMM904.YIL116W,iND750.YIL116W
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007
Exons8
Model size1915
Cds size1236
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig521.12570.1prot_H-paniculata_contig521.12570.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig521 7836..14077 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930517.9806535-UTR-H-paniculata_contig521:7393..78351622930517.9806535-UTR-H-paniculata_contig521:7393..7835Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig521 7394..7835 -
1691481328.2427456-UTR-H-paniculata_contig521:7393..78351691481328.2427456-UTR-H-paniculata_contig521:7393..7835Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig521 7394..7835 -
1622930518.1787872-UTR-H-paniculata_contig521:14077..143141622930518.1787872-UTR-H-paniculata_contig521:14077..14314Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig521 14078..14314 -
1691481328.3588283-UTR-H-paniculata_contig521:14077..143141691481328.3588283-UTR-H-paniculata_contig521:14077..14314Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig521 14078..14314 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930517.999914-CDS-H-paniculata_contig521:7835..80151622930517.999914-CDS-H-paniculata_contig521:7835..8015Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig521 7836..8015 -
1691481328.2618933-CDS-H-paniculata_contig521:7835..80151691481328.2618933-CDS-H-paniculata_contig521:7835..8015Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig521 7836..8015 -
1622930518.0184338-CDS-H-paniculata_contig521:8173..82601622930518.0184338-CDS-H-paniculata_contig521:8173..8260Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig521 8174..8260 -
1691481328.2729094-CDS-H-paniculata_contig521:8173..82601691481328.2729094-CDS-H-paniculata_contig521:8173..8260Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig521 8174..8260 -
1622930518.042065-CDS-H-paniculata_contig521:8998..91491622930518.042065-CDS-H-paniculata_contig521:8998..9149Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig521 8999..9149 -
1691481328.2825372-CDS-H-paniculata_contig521:8998..91491691481328.2825372-CDS-H-paniculata_contig521:8998..9149Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig521 8999..9149 -
1622930518.0629284-CDS-H-paniculata_contig521:9757..100051622930518.0629284-CDS-H-paniculata_contig521:9757..10005Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig521 9758..10005 -
1691481328.2922323-CDS-H-paniculata_contig521:9757..100051691481328.2922323-CDS-H-paniculata_contig521:9757..10005Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig521 9758..10005 -
1622930518.0816848-CDS-H-paniculata_contig521:10343..104181622930518.0816848-CDS-H-paniculata_contig521:10343..10418Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig521 10344..10418 -
1691481328.3014493-CDS-H-paniculata_contig521:10343..104181691481328.3014493-CDS-H-paniculata_contig521:10343..10418Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig521 10344..10418 -
1622930518.1238754-CDS-H-paniculata_contig521:10719..109351622930518.1238754-CDS-H-paniculata_contig521:10719..10935Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig521 10720..10935 -
1691481328.3141513-CDS-H-paniculata_contig521:10719..109351691481328.3141513-CDS-H-paniculata_contig521:10719..10935Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig521 10720..10935 -
1622930518.139591-CDS-H-paniculata_contig521:13305..134901622930518.139591-CDS-H-paniculata_contig521:13305..13490Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig521 13306..13490 -
1691481328.327987-CDS-H-paniculata_contig521:13305..134901691481328.327987-CDS-H-paniculata_contig521:13305..13490Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig521 13306..13490 -
1622930518.152711-CDS-H-paniculata_contig521:13983..140771622930518.152711-CDS-H-paniculata_contig521:13983..14077Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig521 13984..14077 -
1691481328.344895-CDS-H-paniculata_contig521:13983..140771691481328.344895-CDS-H-paniculata_contig521:13983..14077Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig521 13984..14077 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig521.12570.1

>prot_H-paniculata_contig521.12570.1 ID=prot_H-paniculata_contig521.12570.1|Name=mRNA_H-paniculata_contig521.12570.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=412bp
MQDNKSAAVAAAMTSLVVAVTCAFTIRKLVNGRNGEKRKTSTSSSGSKRS
ISDLVRANVRELTPYRCARDDYSTGVLLDANENCYGPALPADQGAVDLTG
LKLNRYPDPLQLDVKNLLAKIRGVRPEQIFVGVGSDEAIDLLMRIFCRPG
EDSILVMPPTYGMYKVSAKVNDVRVQTVPLTPEFEVVVSEVLQTVTPSTK
LLFICSPGNPTGKSVPASIVRAIVQGGFDGMIVVDEAYVDFSGYESACSL
IDELDRVIVLQTLSKAFGMAAIRMGFAYANEQVIQYMNNVKAPYNVNSLS
QEVAVRALSDRSVYKEKVAAILQERTRLQETLRGLSFVKEVKESDANFFL
VQVDNAQAIYKRMADDGVVVRFRGNELHCKDCLRITVGTPEENAKLLELL
KKTVAAVSAAP*
back to top

mRNA from alignment at H-paniculata_contig521:7394..14314-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig521.12570.1 ID=mRNA_H-paniculata_contig521.12570.1|Name=mRNA_H-paniculata_contig521.12570.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6921bp|location=Sequence derived from alignment at H-paniculata_contig521:7394..14314- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACTTCATCCGTCTGTCATATACTCCAGGACAGAGGAGCCTTGTTGATCAC TTTGACTCCTTAGCACAGTGGTGCCGTACAGTTTCTCCCTGTTTTAAGGC TAGCTTATTTAATAGTTGCTTTCGGGACCAAAGCAGGAGAGACGAGGATC TGGGGAACATTCTGCCGTGCTGACATCACCTATCTATTTAGAGATCAGCA CAAGAGGTGTGACACAGTGCCGGGTACAGGGACAGCGATGCAGGATAACA AGTCCGCAGCCGTAGCAGCGGCGATGACATCTCTCGTGGTGGCAGTGACA TGCGCTTTTACTATTCGAAAGCTGGTAAACGGTGAGTTCCACGACTTTGC GCTCCTGCTGGTCACGATTTCCAGCGTTATGTTCATACTCTTCAGTTATT ATTTTGAGAAAAACACGTCATATATACATGTGTAATCATGACATTTTGGG AGTGCTACAAGTCGTTGTCGAGTACTGCAGTACATCTCTGTGGTCACGTT TGCTGCACGCCTGCTGCCGGGAGTCGGTGCGCGTGTTTTAGCGTATAGGT AATTATCTTGTTAATGACCGCTGATATCCGAGTTCACTACATGTGCTGCT GTCTTTGAACAAAAACGGGATACACAACCCCACAGACACCATAATATTCT ACTGCAAGCACTGGCTTTCAAAATGTTGCTAACGTGACACATGAGACCTC TCCCAGACGGCCTTACTGATGGACCAGAACCGCACGCAATATCTTTGTTC ATAGTCACCCGCGGATACCTTCCACCTCACATCTATCTAAGCACAGAACT GATGACGCTGTCGTGATTACTCAGGGCGAAATGGCGAGAAACGGAAAACG TCAACATCGTCCTCCGGTTCAAAGCGATCGATATCAGATCTTGTACGCGC TAACGTCCGAGAGCTCACCCCATACCGGTGCGCCCGGGACGACTATAGCA CGGGCGTGCTGCTGGACGCCAACGAGAACTGCTATGGCCCTGCACTTCCC GCAGATCAGGTGTGCGGCGTCTACACCTATAGCATCGGGTAGCTAATGCT TGACGGTTATCTTCCCATTTCTGGTTCATCACGCAGTCACTGGATGGTGT TATTAATAATTATTTTAATTTGATGTACCTGTTCTGGCGGTCAATGTCAG CTGTAGTTTAGGCCGCTCCTCCACCTGGAGATGTCTATCACAACGACTTG TCGCGATTTGCAGCTCTATAAAAATTCTGGAGGTGGGAATAGCGCCCATG ACCAATGCGAACGAACAGTAGCGTTGTGGAAAGAACGGTAAAGGGTGACG CCGAAAGTGAAACGCCTTACCATGGGTTAAATATTCTAACTTTTACATAC GCCTTGATTTTTGAGGTTACACGTTATTTTCCACCGAGCAGTCTATTTCA ATGAGAAGTGTATCGGATAGAGTAGAAGTACGATGCAAACCCGGCCACAT GTGACCGAAGTACGAAGGGAGCAATTATTACAAGTAACGAGGACTTGTAG AAAACAAATGAAAAAGTCGTACTCCATGACTCAACAACCTGTTCGATGCC TCGAGGCTTCGGCGGCATTGGGCTTGCAACGCGAGCGTGGCAGGAGTTCA GGAATTTATTAGGGTGAGGACATGAGAGTGACAGAAAGGGGGAAGGCAAT GGCTCGCTCAGCCCATGCCTTGCGCCAATAATCTGTATCAAGAACCAGAC TTATATCGAAAACTTAGAATCAAAATAAAAAAAAACTCCGAGAACATCTC ACGAATGATTGCAACCGTTCTGCCACTAGAGTCAGTTTCACATGCATATT TAAGCTGAATCAAAAGATCCCGGTGGGATAACCTCCTAACACACCTATAA TTGGACATCCTCCCTGGTTCTCAGCATCAGATAGTTCAAAACTAGAGGTA AAAATATGGGGAGGAGGAACAGTCGCTCAACTCAAGAAAAGGAAATCTGT TCGTAGGGAAAACCTCTTCTACTTCCATGTCTAGCGCGTAACGTCAGACC ACACGACTTGCAGACACCGGAAACTGTGGCATGCCCTGAAATTGAGACTT CCAAGGAATTGAAGACCCAAGCAAACCGACATTCGTACTCGCCAATAATT CACATGAACATAAAATTCTCCAATGCAATAAAGAATACCAGGATAGCGGA AGACCAGGTCAAACAAAAAACTTTAAAATAAGGTAAACCCATCATCTGCA AACCCAAAATCCTCCCTGCTTCAAGACAAAAAGGATAGATCCATCCGCGC AACAAGTCAACACCAGCATAGGGATCTAGGAGTCTCCTCTGGCACCATCG CCAGACCTTGTAGTCGCACGTCGGGCCGCCGACACCGGGGGAGAAGAGGA GAAAAATGCCTGTCCTGCAGGAGTGGTAGATTCCAGCGGAGGCGGAATTT TGACAATTATCGCCACCAGCGCGCGTGCAGATAACGTCCTCCCCGCTCTA GACGCCGGGCTGCTCCGCGGGCTTACTGATGGTAATTCATCCAGCTTCGC CCGACGGAAGACGTAGACCACGCTTCCAACTGCTTCAGCCGCCCCGCCCG AAGCAGCATCAGCCGGAAATGCTGCAGTCTTGTCTCCGTCGAAGATCTGG CTGTTGATTCTTGCTCACCTAGCCTACCTCACATCCAGGTCTTGAACCTG TCGCTAAAACCTTTGCTTCCCACTCACGCCCGTGACACCATCAAGCGACG CCATGTGGAAAGGAGGTTCGAAACTCACTAATGTGTTGGATATCTTGAGG CTTCGACCGGCTCGGGATCGTAACCCAAAGGTAAAGACAGGAGTTTAAGA GATTTTAGTATGGTGCACACGTGAGAGTGGCATGAAGGGAGAAGAGAGCG GCTCGATCAGTCCATGCATTCGGCCAATCCGTAACAAGAGCCAAATTCGG ACCAGATTCGACATAGCTTCGAACGAAACTCATATCGAAAACTAGGCATC AGAATAATAAAACTCCGAGGACATCCCAGGTTCGCAACTGTCACGCCATT ACAGTCAGTATCACACGCATATTTAGGCTGAATTGAAAGATCCAGATTTG ACAAAACCATCCAGACCGGTACATCGAAACCGAGTCCGTTGGAAACTGCC CAGCACTTCATGTCCTGTGCCAACGTCAACGTGAATATGGAAAGTTATGA CAAAGCCATAGCTCTATTTTCAACAATTACAGTTGTCCCCGTGACGGTCG TTTTGTCACCTTTCGCTCCTTCTCGCTCTCCACTTACTTAGAGTACCGGA CCGTTATCGATACAAGACACAATATATAGTGGCAAACATTTATGGATGCT CACGCGAGTAACGATCCAAACGCTACTATCATGATGGACTCGATCCGTAT GCAAACAATCTATTTTTTCCCACGCACAGGGCGCCGTAGACCTGACAGGG CTGAAACTTAACAGGTACCCAGACCCCTTGCAACTCGACGTCAAGAATCT TCTCGCCAAGATTCGTGGTGTAAGGCCGGAGCAGATCTTCGTGGGCGTCG GAAGCGATGAGGCGATTGACCTTCTCATGCGTATCTTCTGCAGGCCCGGG GAAGACAGTATCCTCGTCATGCCACCGACCTACGGCATGTACAAGGTGAT GGGAGCACTGGGGACGAATTAGCCGAAAATATGAACGCGAGGGGGGTGAC ACGGGAAGGTCTGCAAACATTTACTTGTGGCATAACAGCCTGGTAGGGCT GATGGTTGGGGTGTAGTGGAAGCTGAAGTATAGGATTGAAAAGTAGAGTC GTGCCGCGTTCTATATTTCCCGCGCCAAAATTTTGAAGATATTGTTCGCC CTTTTGTCTCTGCGATGTTCGGCCAAATTGTTGTCATTTGCCTTCGCGTG CTCCACCCTTGCATGTCGTCTGGACACAACGACCGAACGCCTATAGGTAT CAGCGAAGGTGAACGACGTGCGCGTGCAAACTGTCCCCTTAACACCGGAG TTCGAGGTGGTCGTCTCGGAGGTGAGGACTCGGCGCGAAGCCTTTTTTGC AGCGCCACAGTCCGTCGGAAAAAAATTGGTTGGAAAAAGAAAACAAGGAC GCCGAAGGTACATATTGCTGTGTTTTGTCTTGCACCACACGTCGCAAATA GCGCGCTTGCTACGTCTTACCCAGACATTCGAGGAGTTGGGGCACACCGC TGTGCCCCGTCCAAAACTTGTTGAGTCAATACGTTGAATGATGTCAGTGG TTGCCGACACCAGCAATGCCACGTCAGAGCCCTCCCCAATCACCCGCCCA CCCACACGCCTGTGTATCGACCCAAACCGTGGACCGTGCTTACCTCTCGG CTTCTCAAGGTTCTCCAGACGGTTACTCCGTCCACGAAACTTCTATTCAT TTGCTCGCCTGGAAATCCAACGGGAAAAAGCGTGCCGGCGTCGATTGTCC GAGCGATTGTGCAAGGAGGTTTCGACGGCATGATTGTTGTGGACGAGGCC TACGTTGACTTCTCGGGGTACGAGAGCGCGTGCTCGCTGATTGACGAGCT GGACAGGGTGATCGTGCTGCAGACTCTGTCGAAGGCTTTCGGGATGGCCG CGATACGGTACGATCTTTTGTCCCATCCTCTACTGTAGTTCGTGTATGTG TTTCTATTTTTACTGTACGAATAACAGCACCATAGGATATCCAATACAAG ATGGGGAACTAACTAAGGTAATCGACGTAACCATCACTACATTGCAGGAG GTGCGTCTCTCTGTTGAGACAGAGCATTTTGCAGCTCGCGCTTTTTCCGC CTCCACACAATTCCTCCAATTGATCGAGACCCGCCGGTCCGACGGCTCAA AGTGTAGTGCCTCGGTACGTGTCTTGTATCTTCGCGTGGTGAGGGCCGCC GTGCCACGCACTCGTCATCATGGAATTGATGGACGCCATGCTCTGATAAG TGTTGTTCTTCTTTAGGCGATTGTGCCACGTACTAACTTTGTGCTCCAAG TTTTGGTAAAAGAACTGGAAGTCCCGATAATTTTAATCCACAAAACCGAT GAGACGGGCTTTGAATCTATTGCTTAGACTATGGGGGCACGGTTGCTCGC ACACTCGCACAGCGCTTTTAGCATTAGTATCCTCAACTTGTAGGTTGTAA TTAATTCTAATCGTTCTCATCGCTCCGTTCGTTTTTTTGTTTGCTCGAAT ATCATGCCTCCATAGCATGGGCTTTGCCTACGCCAACGAACAAGTGATCC AGTACATGAACAATGTAAAAGCCCCATATAACGTGAACAGCCTCTCTCAA GAGGTGGCCGTTAGAGCCCTCAGCGACCGATCGGTGTACAAGGAGAAAGT TGCCGCTATCTTGCAGGTGCGTCCGTCGTGTTTAGATCTTAGGTGGGGAC GGGAAAATCGACCTTGAAATTGAGGGCGCTATATGATGAACAAAATAGCA AGATACACCACTGGTCGCTGAACCTCTTCCTCGGTGTTACGTGGGACAAT AGATGGTTTCGACAAAAACAAAATAGGCTCAACATTCAATGTAGGGTCGG GATTTGGGTACGGGGTATCCTCCTAAACCTGCGTCGAAAAATCGCTTTTT TGCGAAAACTGTCCAAGGAGCACGCAGCGATCCTAAAGCCAGCGTACTGT TGGTTGTTTTCAATACTGTGAAGTCTTCTGATCCCCCGAATAGCTATACA GGACTTCCTTACTTATTCAAGCCCGGCATTTGGTCGTTCGTCATTCATAC TGAATCCAAGAAAACACGGCGCCAATTGGCAAAAAAATAAACCCCTTTTG GACATAGTGTACGCTCACCAGTTGCCTAGAGTTGGCAAGGGTTCTGTAGG TAGACTCGTCATTTTTCATGACTGGCTATTAGGAAACCTACGTTTGGTCG TTACGAGGTCCCGTTTCTCAAGAGTCAATCTGGAGATATGCCAAGTTTTT GTTATACTGATGATGGTGCTTGCGTTATTCTCGACATGAAATGGGAGGTA GTTGTATCATCCGCACTACCGTCAGATCCAGTTGAAGTCCAGATATGCCT TCATTTTGACTTGTCTTACATCTTATCCCTGTGGTGTACAATTTCCGCGA GCAGGAGCGAACGCGCTTGCAGGAAACCTTGCGAGGATTGAGCTTTGTAA AAGAGGTGAAGGAATCGGACGCGAACTTCTTTTTGGTACAGGTAAGTTAT TTTCTATAACTTCACCGTTGCAATATGAAACTGAAATCATTGGTTCACTA GCGCTAGCGTCGCTCTGAGTGCAATGGCTGTTCAACTTGCTCATGAAGTG CCCATGGAGTTACCGACTCCATGGATGATGATGATGCATGTGTCAACAGG TGGATAACGCGCAAGCGATCTACAAACGTATGGCGGATGACGGAGTCGTG GTGCGATTCCGCGGTAACGAGTTGCACTGCAAGGATTGCCTGCGGATAAC CGTCGGAACCCCCGAGGAGAATGCTAAACTGCTGGAACTCCTGAAGAAAA CTGTTGCTGCGGTTTCTGCGGCTCCCTAGTTTTCTGTCCACCGCTCCTGA CGCGTTTTGCCTCATGTTGAGTCTGCGGTTCCTTGTTATTAGGACAATAT CCTCTTTCCCCGTGTGGTTCATTTTCCACTTTTGATATTTCAACTTTGTG GATACGGTGCATGGCTCTCTGGCCGCCAGTTTCCGCATTTGCTGGTCTTG CGGTTCTGATACGGTTATTCGTGCTACAAGGCAGTATGATGAGTTGATTG CATTCGTGGATTAATCCTCCATGCATATTGCCGATTTGACCGACTTATGG TGAACTCATTTTGCTCGAATCTGCCTTCCGTATATATAGCAGTCGATTGC GTGGAAACAGTCTGTCTAGCGAAAGGCGCGATGAATCGCTACGTGCTCGC TCGTCCCATCTTCTTTGGGGTGCATTGGTTTTCCAAAAGATCGAGTGTCG TCTGCATGAGTAAATACCTGA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig521:7394..14314-

>mRNA_H-paniculata_contig521.12570.1 ID=mRNA_H-paniculata_contig521.12570.1|Name=mRNA_H-paniculata_contig521.12570.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2472bp|location=Sequence derived from alignment at H-paniculata_contig521:7394..14314- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCAGGATAACAAGTCCGCAGCCGTAGCAGCGGCGATGACATCTCTCGT
GGTGGCAGTGACATGCGCTTTTACTATTCGAAAGCTGGTAAACGATGCAG
GATAACAAGTCCGCAGCCGTAGCAGCGGCGATGACATCTCTCGTGGTGGC
AGTGACATGCGCTTTTACTATTCGAAAGCTGGTAAACGGGCGAAATGGCG
AGAAACGGAAAACGTCAACATCGTCCTCCGGTTCAAAGCGATCGATATCA
GATCTTGTACGCGCTAACGTCCGAGAGCTCACCCCATACCGGTGCGCCCG
GGACGACTATAGCACGGGCGTGCTGCTGGACGCCAACGAGAACTGCTATG
GCCCTGCACTTCCCGCAGATCAGGGCGAAATGGCGAGAAACGGAAAACGT
CAACATCGTCCTCCGGTTCAAAGCGATCGATATCAGATCTTGTACGCGCT
AACGTCCGAGAGCTCACCCCATACCGGTGCGCCCGGGACGACTATAGCAC
GGGCGTGCTGCTGGACGCCAACGAGAACTGCTATGGCCCTGCACTTCCCG
CAGATCAGGGCGCCGTAGACCTGACAGGGCTGAAACTTAACAGGTACCCA
GACCCCTTGCAACTCGACGTCAAGAATCTTCTCGCCAAGATTCGTGGTGT
AAGGCCGGAGCAGATCTTCGTGGGCGTCGGAAGCGATGAGGCGATTGACC
TTCTCATGCGTATCTTCTGCAGGCCCGGGGAAGACAGTATCCTCGTCATG
CCACCGACCTACGGCATGTACAAGGGCGCCGTAGACCTGACAGGGCTGAA
ACTTAACAGGTACCCAGACCCCTTGCAACTCGACGTCAAGAATCTTCTCG
CCAAGATTCGTGGTGTAAGGCCGGAGCAGATCTTCGTGGGCGTCGGAAGC
GATGAGGCGATTGACCTTCTCATGCGTATCTTCTGCAGGCCCGGGGAAGA
CAGTATCCTCGTCATGCCACCGACCTACGGCATGTACAAGGTATCAGCGA
AGGTGAACGACGTGCGCGTGCAAACTGTCCCCTTAACACCGGAGTTCGAG
GTGGTCGTCTCGGAGGTATCAGCGAAGGTGAACGACGTGCGCGTGCAAAC
TGTCCCCTTAACACCGGAGTTCGAGGTGGTCGTCTCGGAGGTTCTCCAGA
CGGTTACTCCGTCCACGAAACTTCTATTCATTTGCTCGCCTGGAAATCCA
ACGGGAAAAAGCGTGCCGGCGTCGATTGTCCGAGCGATTGTGCAAGGAGG
TTTCGACGGCATGATTGTTGTGGACGAGGCCTACGTTGACTTCTCGGGGT
ACGAGAGCGCGTGCTCGCTGATTGACGAGCTGGACAGGGTGATCGTGCTG
CAGACTCTGTCGAAGGCTTTCGGGATGGCCGCGATACGGTTCTCCAGACG
GTTACTCCGTCCACGAAACTTCTATTCATTTGCTCGCCTGGAAATCCAAC
GGGAAAAAGCGTGCCGGCGTCGATTGTCCGAGCGATTGTGCAAGGAGGTT
TCGACGGCATGATTGTTGTGGACGAGGCCTACGTTGACTTCTCGGGGTAC
GAGAGCGCGTGCTCGCTGATTGACGAGCTGGACAGGGTGATCGTGCTGCA
GACTCTGTCGAAGGCTTTCGGGATGGCCGCGATACGCATGGGCTTTGCCT
ACGCCAACGAACAAGTGATCCAGTACATGAACAATGTAAAAGCCCCATAT
AACGTGAACAGCCTCTCTCAAGAGGTGGCCGTTAGAGCCCTCAGCGACCG
ATCGGTGTACAAGGAGAAAGTTGCCGCTATCTTGCAGCATGGGCTTTGCC
TACGCCAACGAACAAGTGATCCAGTACATGAACAATGTAAAAGCCCCATA
TAACGTGAACAGCCTCTCTCAAGAGGTGGCCGTTAGAGCCCTCAGCGACC
GATCGGTGTACAAGGAGAAAGTTGCCGCTATCTTGCAGGAGCGAACGCGC
TTGCAGGAAACCTTGCGAGGATTGAGCTTTGTAAAAGAGGTGAAGGAATC
GGACGCGAACTTCTTTTTGGTACAGGAGCGAACGCGCTTGCAGGAAACCT
TGCGAGGATTGAGCTTTGTAAAAGAGGTGAAGGAATCGGACGCGAACTTC
TTTTTGGTACAGGTGGATAACGCGCAAGCGATCTACAAACGTATGGCGGA
TGACGGAGTCGTGGTGCGATTCCGCGGTAACGAGTTGCACTGCAAGGATT
GCCTGCGGATAACCGTCGGAACCCCCGAGGAGAATGCTAAACTGCTGGAA
CTCCTGAAGAAAACTGTTGCTGCGGTTTCTGCGGCTCCCTAGGTGGATAA
CGCGCAAGCGATCTACAAACGTATGGCGGATGACGGAGTCGTGGTGCGAT
TCCGCGGTAACGAGTTGCACTGCAAGGATTGCCTGCGGATAACCGTCGGA
ACCCCCGAGGAGAATGCTAAACTGCTGGAACTCCTGAAGAAAACTGTTGC
TGCGGTTTCTGCGGCTCCCTAG
back to top