prot_H-paniculata_contig5152.12474.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5152.12474.1
Unique Nameprot_H-paniculata_contig5152.12474.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length254
Homology
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BLAST of mRNA_H-paniculata_contig5152.12474.1 vs. uniprot
Match: D8LIV9_ECTSI (Novel protein containing a T-complex protein 11 domain (Zgc:73347) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIV9_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 5.030e-29
Identity = 85/170 (50.00%), Postives = 110/170 (64.71%), Query Frame = 0 
Query:   81 SKLLRRLSSPIYNTAPFGTGDEDGDKXXXXXXXRARDRALSLD-------EAKEEAAEKVQRWWRAARRTARRTGVVMSARASFETIEKLLTELDAGQLSFEQAGIALQDAALQRAVTTAFRTVPPDETLASLPRASRSARAILSSVMIVYFESEVLPAL-EGEENGEEE 242
            S +LRRLSSPI+  A F +  E    XXXXXXX                 E KE AAE VQRWWR  RR ++RT  V++AR +F  I++L  +LDAGQ+SFE+ G+ALQ+  +QRAVT A   VP D+ L ++P+ASRS RA+LSS+MIVY   EVL A  + EE+G+ E
Sbjct:   25 SNVLRRLSSPIFGAAGFNSDSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXERKEGAAELVQRWWRECRRASKRTRAVVAARPAFVRIQQLFDKLDAGQMSFERTGLALQNPDIQRAVTKALSAVPRDDALLAMPKASRSTRAVLSSLMIVYHPGEVLTAEGDDEESGDAE 194
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5152.12474.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIV9_ECTSI5.030e-2950.00Novel protein containing a T-complex protein 11 do... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5152contigH-paniculata_contig5152:1665..9806 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5152.12474.1mRNA_H-paniculata_contig5152.12474.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5152 1665..9806 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5152.12474.1 ID=prot_H-paniculata_contig5152.12474.1|Name=mRNA_H-paniculata_contig5152.12474.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=254bp
MGQRGGRVDSAISATESKEPGMMSRRSDLSVEVPPSGDGSAEEKGDGRKL
PLSSGRLMDNHDGGAVHQKQKPEEEEEDDPSKLLRRLSSPIYNTAPFGTG
DEDGDKDRSDNDNRARDRALSLDEAKEEAAEKVQRWWRAARRTARRTGVV
MSARASFETIEKLLTELDAGQLSFEQAGIALQDAALQRAVTTAFRTVPPD
ETLASLPRASRSARAILSSVMIVYFESEVLPALEGEENGEEENEAGDGPS
TVPT
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