prot_H-paniculata_contig5144.12459.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5144.12459.1
Unique Nameprot_H-paniculata_contig5144.12459.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length173
Homology
BLAST of mRNA_H-paniculata_contig5144.12459.1 vs. uniprot
Match: D8LQ25_ECTSI (Transposase n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LQ25_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 2.400e-35
Identity = 72/140 (51.43%), Postives = 98/140 (70.00%), Query Frame = 0
Query:   33 KLKQRLPDARQILPALEQRKMSAWQPRDELAPQQGALLGTSQSRAILLVYFNLVQSGMDQNPPVRETARVMRIGPKKIFKVHTLWEDQKSLKTTSAEGRGMENGQNGRTVVTDLQTLKLCAFISGKHQDGQQVFRRTESE 172
            K +Q+ P+A    P  E R+  A Q RD+LAP+ G+LL TSQSR+ILL YF LVQSG++ N  V+ TA  +R+G  K+FKV   W ++  L T+SAEGRG+ +G++GR ++ D+Q   L AFIS KH++GQQVFRRT  E
Sbjct:   62 KQQQQGPEADTGAPQQEAREQQAAQQRDDLAPRTGSLLDTSQSRSILLTYFELVQSGVEPNKAVQRTASTLRVGKDKVFKVRAHWWEKTELLTSSAEGRGVSSGKDGRKLLDDVQCANLRAFISDKHENGQQVFRRTVRE 201          
BLAST of mRNA_H-paniculata_contig5144.12459.1 vs. uniprot
Match: A0A6H5KZM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZM0_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 2.540e-33
Identity = 64/122 (52.46%), Postives = 87/122 (71.31%), Query Frame = 0
Query:   51 RKMSAWQPRDELAPQQGALLGTSQSRAILLVYFNLVQSGMDQNPPVRETARVMRIGPKKIFKVHTLWEDQKSLKTTSAEGRGMENGQNGRTVVTDLQTLKLCAFISGKHQDGQQVFRRTESE 172
            R+  A Q RD+LAP+ G+LL  SQSR+ILL YF LVQSG++ N  V+ TA  +R+G  K+FKV   W ++  L  +SAEGRG+ +G++GR ++ D+Q   L AFIS KH++GQQVFRRT  E
Sbjct:   80 REQQAAQQRDDLAPKTGSLLDISQSRSILLTYFELVQSGVEPNKAVQRTAATLRVGKDKVFKVRAHWWEKTELLASSAEGRGVSSGKDGRKLLDDVQCASLRAFISDKHENGQQVFRRTVRE 201          
BLAST of mRNA_H-paniculata_contig5144.12459.1 vs. uniprot
Match: D7FWI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWI1_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 2.110e-16
Identity = 44/95 (46.32%), Postives = 60/95 (63.16%), Query Frame = 0
Query:   39 PDARQILPALEQRKMSAWQPRDELAPQQGALLGTSQSRAILLVYFNLVQSGMDQNPPVRETARVMRIGPKKIFKVHTLWEDQKSLKTTSAEGRGM 133
            PDA    P  E R+  A + RD LA + G+LL  SQSR+ILL YF LVQ+G++ N  +  TA  +R+G  K+FKV T W ++  L T+S  GRG+
Sbjct:   68 PDADTRTPQQEAREEDAAKQRDVLAHRTGSLLDKSQSRSILLTYFELVQAGVEPNKAILRTASTLRVGKDKVFKVRTHWWEKSELLTSSGAGRGV 162          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5144.12459.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LQ25_ECTSI2.400e-3551.43Transposase n=3 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A6H5KZM0_9PHAE2.540e-3352.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWI1_ECTSI2.110e-1646.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5144contigH-paniculata_contig5144:3114..4114 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5144.12459.1mRNA_H-paniculata_contig5144.12459.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5144 3078..5353 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5144.12459.1 ID=prot_H-paniculata_contig5144.12459.1|Name=mRNA_H-paniculata_contig5144.12459.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=173bp
MVKVKEAAIKAREAACATDEAANKAAHEAARPKLKQRLPDARQILPALEQ
RKMSAWQPRDELAPQQGALLGTSQSRAILLVYFNLVQSGMDQNPPVRETA
RVMRIGPKKIFKVHTLWEDQKSLKTTSAEGRGMENGQNGRTVVTDLQTLK
LCAFISGKHQDGQQVFRRTESE*
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