prot_H-paniculata_contig5120.12429.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5120.12429.1
Unique Nameprot_H-paniculata_contig5120.12429.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length220
Homology
BLAST of mRNA_H-paniculata_contig5120.12429.1 vs. uniprot
Match: D8LSK3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSK3_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 6.780e-66
Identity = 117/192 (60.94%), Postives = 139/192 (72.40%), Query Frame = 0
Query:   26 VEGFAISTPLRTKSARANDTVGLPVSGSTARRSSSRAHTSSMFFDFGKAKESTGRPVAGGTVKGGKKSKIVQEVSPAAKRQQ--AATQRRSAAQTANKKLEGVFTPPQFEAFQRARREVPSGSGQAYWNAIAARVPGQNAAACKGMAESLLFEKAVGTKSNYFGGYIETKETPDYVDPDADIFVRLGKFFGK 215
            VEGF+    L T  A    +  L  S + +RRSS       MFFDFGK  ES  RP+AGGTVKGGKK+KI Q+V+PA +R Q  A   R  + + + +K EGVFTPPQFEAF++AR+EVPSG G AYW  IAARVPGQNAAACK +AES+LFE AVGTKSNYFGGYIET ETPDYVDP+ADI  ++ K FG+
Sbjct:   19 VEGFSTRPSLHTHRAATTASRSLQASRAGSRRSSQTR----MFFDFGKKTESNARPMAGGTVKGGKKTKITQDVTPAQRRAQEKATAIRERSRKASTRKSEGVFTPPQFEAFKKARKEVPSGKGDAYWEKIAARVPGQNAAACKRVAESMLFEAAVGTKSNYFGGYIETIETPDYVDPEADIMFKINKLFGR 206          
BLAST of mRNA_H-paniculata_contig5120.12429.1 vs. uniprot
Match: A0A835YZY5_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZY5_9STRA)

HSP 1 Score: 122 bits (305), Expect = 5.200e-31
Identity = 82/165 (49.70%), Postives = 100/165 (60.61%), Query Frame = 0
Query:   63 HTSS--MFFDFGKAKESTG---RPVAGGTVKGGKKSKIVQEVS---PAAKRQQAATQRRSAAQTANKKLE-GVFTPPQFEAFQRARREVPSGSGQAYWNAIAARVPGQNAAACKGMAESLLFEKAVGTKSNYFGGYIETKETPDYVDPDADIFVRLGKFF--GKK 216
            HT S  M F  G  K ++    RP AG T KG KK+ +  + S   PA +R++ A Q  +A + A K  E GVF+P Q+E F  AR  VPSG+   YW  IA +VPGQNA  CK MA  LLFEKA GTK N+FGGY+ET E  DYVD DAD+  +L   F  GKK
Sbjct:   40 HTCSTQMVFKLGPPKATSAASSRPTAGATTKGLKKTPVASDSSWNGPAVERRRKA-QAIAAKKAAEKAAEAGVFSPEQYEKFLDARATVPSGASN-YWQRIADKVPGQNAENCKKMASQLLFEKAAGTKKNFFGGYVETIEVKDYVDEDADVMGKLANMFSFGKK 202          
BLAST of mRNA_H-paniculata_contig5120.12429.1 vs. uniprot
Match: A0A835YSA5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSA5_9STRA)

HSP 1 Score: 118 bits (295), Expect = 9.440e-30
Identity = 75/150 (50.00%), Postives = 93/150 (62.00%), Query Frame = 0
Query:   67 MFFDFGKAKESTG---RPVAGGTVKGGKKSKIVQEVS---PAAKRQQAATQRRSAAQTANKKLE-GVFTPPQFEAFQRARREVPSGSGQAYWNAIAARVPGQNAAACKGMAESLLFEKAVGTKSNYFGGYIETKETPDYVDPDADIFVRL 209
            M F  G  K ++    RP AG T KG KK+ +  + S   PA +R++ A Q  +A + A K  E GVF+P Q+E F  AR  VPSG+   YW  IA +VPGQNA  CK MA  LLFEKA GTK N+FGGY+ET E  DYVD DAD+  +L
Sbjct:    1 MVFKLGPPKATSAASSRPTAGATTKGLKKTPVASDSSWNGPAVERRRKA-QAIAAKKAAEKAAEAGVFSPEQYEKFLDARATVPSGASN-YWQRIADKVPGQNAENCKKMASQLLFEKAAGTKKNFFGGYVETIEVKDYVDEDADVMGKL 148          
BLAST of mRNA_H-paniculata_contig5120.12429.1 vs. uniprot
Match: W7TIQ4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TIQ4_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 3.010e-22
Identity = 53/101 (52.48%), Postives = 64/101 (63.37%), Query Frame = 0
Query:  116 AQTANKKLEGVFTPPQFEAFQRARREVPSGSGQAYWNAIAARVPGQNAAACKGMAESLLFEKAVGTKSNYFGGYIETKETPDYVDPDADIFVRLGKFFGKK 216
            A+  N KLEG FT  Q +A + ARREVPS S  +YW  IA++VPGQ A  CK M   LL +KA GT  N+FGGY+E KET   VD +A +  RL   FG K
Sbjct:  118 ARVVNGKLEGYFTNEQLQALEVARREVPS-SAASYWQKIASKVPGQTAETCKAMTNQLLLDKARGTGKNFFGGYVEVKETKMVVDTEATVGKRLKAAFGLK 217          
BLAST of mRNA_H-paniculata_contig5120.12429.1 vs. uniprot
Match: A0A7S2X777_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X777_9EUKA)

HSP 1 Score: 72.0 bits (175), Expect = 1.250e-11
Identity = 42/98 (42.86%), Postives = 57/98 (58.16%), Query Frame = 0
Query:  126 VFTPPQFEAFQRARREVPSGSGQAYWNAIAARV-PGQNAAACKGMAESLLFEKAVGTKSNYFGGYIETKET---PDYVDPDA-DIFVRLGKFFGKKSG 218
            VFT  Q   F +AR+E+PSGSG AYW  +A RV  G  A  CK +A++ LF+KA GT SN+F  +++ K       YVD  A D   ++  F+G   G
Sbjct:   91 VFTDKQVARFLQARKELPSGSGDAYWQKVADRVGDGITAYECKRLAQNQLFKKAAGTSSNFFKNFVDVKGEYVESGYVDETAADPMTQMKNFWGGMLG 188          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5120.12429.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LSK3_ECTSI6.780e-6660.94Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YZY5_9STRA5.200e-3149.70Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835YSA5_9STRA9.440e-3050.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TIQ4_9STRA3.010e-2252.48Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S2X777_9EUKA1.250e-1142.86Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..219
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..30
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..28
score: 0.831
NoneNo IPR availableTMHMMTMhelixcoord: 12..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5120contigH-paniculata_contig5120:7723..11763 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5120.12429.1mRNA_H-paniculata_contig5120.12429.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5120 5091..11875 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5120.12429.1 ID=prot_H-paniculata_contig5120.12429.1|Name=mRNA_H-paniculata_contig5120.12429.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=220bp
MKQTALRKTNSFLVVLLITALSVLDVEGFAISTPLRTKSARANDTVGLPV
SGSTARRSSSRAHTSSMFFDFGKAKESTGRPVAGGTVKGGKKSKIVQEVS
PAAKRQQAATQRRSAAQTANKKLEGVFTPPQFEAFQRARREVPSGSGQAY
WNAIAARVPGQNAAACKGMAESLLFEKAVGTKSNYFGGYIETKETPDYVD
PDADIFVRLGKFFGKKSGE*
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