mRNA_H-paniculata_contig11939.1234.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig11939.1234.1
Unique NamemRNA_H-paniculata_contig11939.1234.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig11939.1234.1 vs. uniprot
Match: D7FNN4_ECTSI (Methyltransf_25 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNN4_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 1.990e-67
Identity = 113/161 (70.19%), Postives = 133/161 (82.61%), Query Frame = 1
Query:  244 MANGGDCVGEKLAPFNPSGDEVIRTAIDMLQVGHADVVYDLGCGDGRMLIEAIKTSGARGVGVEYDKRFADRAHQRVAEAGLGSKITIIHANVLDIDPTGATAVFVYLIPAGMLAVREALVALLKAGARVVTYVFSMPDLVPVRVETFKATKIYLYTATSL 726
            M +   C+GEKLAPFNPS D VIR AI+MLQ+    ++YDLGCGDGR+L+EAIK SGARGVGVEYDKRF DRA  RVA+A L  KI ++H NVLD+D   ATAVF+YL+PAGM A++EALV+ L+AGARVVTYVFS+P L PVRVETFKATKIYLYTA S+
Sbjct:    1 MEDNSGCIGEKLAPFNPSSDAVIRMAIEMLQLVKESILYDLGCGDGRLLVEAIKASGARGVGVEYDKRFVDRALTRVADAQLEHKIKVVHGNVLDVDIVEATAVFIYLVPAGMAALKEALVSALRAGARVVTYVFSIPGLDPVRVETFKATKIYLYTAASV 161          
BLAST of mRNA_H-paniculata_contig11939.1234.1 vs. uniprot
Match: A0A7S1XM06_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XM06_9STRA)

HSP 1 Score: 171 bits (434), Expect = 1.380e-46
Identity = 88/156 (56.41%), Postives = 114/156 (73.08%), Query Frame = 1
Query:  265 VGEKLAPFNPSGDEVIRTAIDMLQVGHADVVYDLGCGDGRMLIEAIKTSGARGVGVEYDKRFADRAHQRVAEAGLGS-KITIIHANVLDIDPTGATAVFVYLIPAGMLAVREALVALLKAGARVVTYVFSMPDLVPVRVETFKA-TKIYLYTATSL 726
            VG  LAPFNPSGD+VI  A+DML +G  D ++D+GCGDGR+L+EA    G RGVG+EYD+ F +RA +RVA+AG  + +I + HAN LD+D T A A+FVYL+P GM A+R+A V +L+ G R+V+YVFS+PDL P         TKIYLYTA SL
Sbjct:   37 VGPYLAPFNPSGDDVINDALDMLGLGEDDTLWDVGCGDGRLLVEAATRHGCRGVGIEYDETFVERARKRVADAGFDAERIRVEHANALDVDFTAAKAIFVYLLPKGMRALRDAYVEVLRGGGRIVSYVFSIPDLAPQETRVHGGVTKIYLYTAASL 192          
BLAST of mRNA_H-paniculata_contig11939.1234.1 vs. uniprot
Match: A0A835YND5_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YND5_9STRA)

HSP 1 Score: 156 bits (394), Expect = 2.050e-41
Identity = 77/154 (50.00%), Postives = 108/154 (70.13%), Query Frame = 1
Query:  265 VGEKLAPFNPSGDEVIRTAIDMLQVGHADVVYDLGCGDGRMLIEAIKTSGARGVGVEYDKRFADRAHQRVAEAGLGSKITIIHANVLDIDPTGATAVFVYLIPAGMLAVREALVALLKAGARVVTYVFSMPDLVPVRVETFKATKIYLYTATSL 726
            +G+ LAPFNPSG+ VI  A+ +L +   D+++DLGCGDGR+L++A   + +RGVG+EYD++FADRA  +V   G+   +TI H N L+ D + ATA FVYL+P GM  +R  L  LL+ G RVVTY+FS+P + PV+    K T++ LYTA SL
Sbjct:   20 IGDGLAPFNPSGELVIDAALQLLSLTEKDLLFDLGCGDGRLLVQAALRTRSRGVGIEYDRKFADRAAAQVEGQGVQDLVTIQHGNALEADLSNATAAFVYLVPKGMAQLRGKLEGLLQRGGRVVTYIFSVPAMTPVQTVVVKGTRVMLYTAASL 173          
BLAST of mRNA_H-paniculata_contig11939.1234.1 vs. uniprot
Match: W2NPK7_PHYPR (rADc domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2NPK7_PHYPR)

HSP 1 Score: 135 bits (340), Expect = 6.300e-34
Identity = 70/153 (45.75%), Postives = 101/153 (66.01%), Query Frame = 1
Query:  265 VGEKLAPFNPSGDEVIRTAIDMLQVGHADVVYDLGCGDGRMLIEAIKTSGARGVGVEYDKRFADRAHQRVAEAGLGSKITIIHANVLDIDPTGATAVFVYLIPAGMLAVREALVALLKAGARVVTYVFSMPDLVPVRVETFKATKIYLYTATS 723
            +G KLAPF PSGD V+  A+D+L +   DV++DLGCGD R+L+ A + +GAR VGVEYD+    RA  RV E G+ + + I H + L++D T ATA+F+YL+P G+  +   L    +   R+VTYVFS+P   P    T+K TK+YLY +++
Sbjct:    6 LGRKLAPFTPSGDGVLDHALDLLALSSDDVLFDLGCGDARILVHAAEKTGARCVGVEYDEDLVKRARTRVEEHGVEALVEIRHGDALEVDLTLATALFLYLVPQGIKMLLPKLEEARRLQVRIVTYVFSIPGWKPDDQRTYKGTKVYLYNSSA 158          
BLAST of mRNA_H-paniculata_contig11939.1234.1 vs. uniprot
Match: A0A8K1CJ46_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJ46_PYTOL)

HSP 1 Score: 133 bits (334), Expect = 4.010e-33
Identity = 69/153 (45.10%), Postives = 99/153 (64.71%), Query Frame = 1
Query:  259 DCVGEKLAPFNPSGDEVIRTAIDMLQVGHADVVYDLGCGDGRMLIEAIKTSGARGVGVEYDKRFADRAHQRVAEAGLGSKITIIHANVLDIDPTGATAVFVYLIPAGMLAVREALVALLKAGARVVTYVFSMPDLVPVRVETFKATKIYLYTA 717
            + +G KLAPF PSGD V+  A+D+LQ+   DV++DLGCGD RML+ A   + AR VGVEYD++   +A  RV +  +  ++TI+HA+   +D   ATA+F+YL+P G+  +   L    + G R+VTYVFS+P      V  FK TK+YLY +
Sbjct:    3 ETLGPKLAPFTPSGDGVLAHALDLLQLTADDVLFDLGCGDARMLVHAAMHTHARCVGVEYDEQLVSKALTRVQDNAVAERVTILHADATTVDVARATAMFLYLVPQGIKLMLPKLEEAREHGVRIVTYVFSIPGWRVDAVRDFKGTKVYLYNS 155          
BLAST of mRNA_H-paniculata_contig11939.1234.1 vs. uniprot
Match: A0A7R9U0C3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U0C3_9STRA)

HSP 1 Score: 134 bits (337), Expect = 7.450e-33
Identity = 69/154 (44.81%), Postives = 101/154 (65.58%), Query Frame = 1
Query:  268 GEKLAPFNPSGDEVIRTAIDMLQVGHADVVYDLGCGDGRMLIEAIKTSGARGVGVEYDKRFADRAHQRVAEAGLGSKITIIHANVLDIDPTGATAVFVYLIPAGMLAVREALVALLKAGARVVTYVFSMPDLVPV-RVETFKATKIYLYTATSL 726
            G  LAPF PS + V R ++ ML++    V+YD+GCGD R+L+EA +  G +G+G++YD+    +A + VA++GL   I I+H N L+ D   A  +FVYL+P GM A+R   V +L  G R+V+YVFS+PDL PV +++    T +YLYT  SL
Sbjct:   29 GPYLAPFLPSSEIVQRESLRMLELTSDAVLYDIGCGDARLLVEAARQHGCQGIGIDYDEAIVLKARESVAQSGLADAIAILHENALETDLRAAHRIFVYLMPKGMAALRTTFVRILSEGGRIVSYVFSIPDLEPVEKLQPEPMTNLYLYTKDSL 182          
BLAST of mRNA_H-paniculata_contig11939.1234.1 vs. uniprot
Match: A0A6A4G4Z6_9STRA (Methyltranfer_dom domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A4G4Z6_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.160e-32
Identity = 68/161 (42.24%), Postives = 103/161 (63.98%), Query Frame = 1
Query:  244 MANGGDCVGEKLAPFNPSGDEVIRTAIDMLQVGHADVVYDLGCGDGRMLIEAIKTSGARGVGVEYDKRFADRAHQRVAEAGLGSKITIIHANVLDIDPTGATAVFVYLIPAGMLAVREALVALLKAGARVVTYVFSMPDLVPVRVETFKATKIYLYTATSL 726
            M++    +G KLAPF PSGD V+  A+D+L +   DV++DLGCGD R+L+ A + +GAR +GVEY++    RA  RV E G+ + + + H + L++D T ATA+F+YL+P G+  +   L    +   R+VTYVFS+P   P     +K TK+YLY + S+
Sbjct:    5 MSHEAVALGPKLAPFTPSGDGVLDHALDLLALTGDDVLFDLGCGDARILVHAAEKTGARCIGVEYNEDLVKRARARVEEHGVQTLVEVRHGDALEVDLTPATALFLYLVPQGIKMLLPKLEEARRLHVRIVTYVFSIPGWKPDDERNYKGTKVYLYNSPSI 165          
BLAST of mRNA_H-paniculata_contig11939.1234.1 vs. uniprot
Match: K3WE72_GLOUD (Methyltransf_25 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WE72_GLOUD)

HSP 1 Score: 129 bits (325), Expect = 1.210e-31
Identity = 67/151 (44.37%), Postives = 98/151 (64.90%), Query Frame = 1
Query:  265 VGEKLAPFNPSGDEVIRTAIDMLQVGHADVVYDLGCGDGRMLIEAIKTSGARGVGVEYDKRFADRAHQRVAEAGLGSKITIIHANVLDIDPTGATAVFVYLIPAGMLAVREALVALLKAGARVVTYVFSMPDLVPVRVETFKATKIYLYTA 717
            V  KLAPF PSGD V+  A+++LQ+   DV++DLGCGD R+L+ A +T+GAR VGVEY+     +A QRV E  +  ++ I+H + L +D + ATA+F+YL+P G+  +   L    +   R+VTYVFS+P      +  FK TK+YLY +
Sbjct:   14 VASKLAPFTPSGDGVLVFAMELLQLSARDVLFDLGCGDARILVHAAQTTGARCVGVEYNADLVVKAKQRVDEHNVSDRVEIVHGDALQVDLSQATALFLYLVPQGIKLLLPKLEEARRNRMRIVTYVFSIPGWRYDEIRDFKGTKVYLYNS 164          
BLAST of mRNA_H-paniculata_contig11939.1234.1 vs. uniprot
Match: A0A0P1AKS5_PLAHL (Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AKS5_PLAHL)

HSP 1 Score: 120 bits (302), Expect = 1.510e-28
Identity = 66/154 (42.86%), Postives = 95/154 (61.69%), Query Frame = 1
Query:  265 VGEKLAPFNPSGDEVIRTAIDMLQVGHADVVYDLGCGDGRMLIEAIKTSGARGVGVEYDKRFADRAHQRVAEAGLGSKITIIHANVLDIDPTGATAVFVYLIPAGMLAVREALVALLKAGARVVTYVFSMPDLVPVRVETFKATKIYLYTATSL 726
            +G KLAPF PSG EV+   +D+L +   DV++DLGCGD R+L+ A   + A  +GVEYD     RA  RV E GL + + I + N L++D T ATA+F+YL+P G+  +   L    +   R+VTYVFS+P         +K TKIYLY ++++
Sbjct:    7 LGPKLAPFIPSGKEVLDHTLDLLALSSDDVLFDLGCGDARLLVYAANKTSATCIGVEYDGDLVKRAQTRVQEHGLEALVDIQYGNALNVDLTRATALFLYLMPQGIKMLMPKLEEARRLHVRIVTYVFSIPGWKIDDQRDYKGTKIYLYNSSAV 160          
BLAST of mRNA_H-paniculata_contig11939.1234.1 vs. uniprot
Match: A0A3R7J935_9STRA (HP domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J935_9STRA)

HSP 1 Score: 130 bits (326), Expect = 3.440e-28
Identity = 67/153 (43.79%), Postives = 101/153 (66.01%), Query Frame = 1
Query:  265 VGEKLAPFNPSGDEVIRTAIDMLQVGHADVVYDLGCGDGRMLIEAIKTSGARGVGVEYDKRFADRAHQRVAEAGLGSKITIIHANVLDIDPTGATAVFVYLIPAGMLAVREALVALLKAGARVVTYVFSMPDLVPVRVETFKATKIYLYTATS 723
            +G KLAPF PSGD V+  A+++L + + DV++DLGCGD R+L+ A +  GAR +GVEY++    RA +RV E G+ S + I H + L++D T ATA+F+YL+P G+  +   L    +   R+VTYVFS+P        ++K TK+YLY ++S
Sbjct:  880 LGPKLAPFTPSGDGVLDHALELLDLTNEDVLFDLGCGDARVLVHAAEKVGARCIGVEYNEDLVKRAQERVKEHGVNSLVEIRHGDALEVDLTTATALFLYLVPQGIKMLLPKLEEARQLHVRIVTYVFSIPGWKCDDQRSYKGTKVYLYNSSS 1032          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11939.1234.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNN4_ECTSI1.990e-6770.19Methyltransf_25 domain-containing protein n=1 Tax=... [more]
A0A7S1XM06_9STRA1.380e-4656.41Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A835YND5_9STRA2.050e-4150.00S-adenosyl-L-methionine-dependent methyltransferas... [more]
W2NPK7_PHYPR6.300e-3445.75rADc domain-containing protein n=9 Tax=Phytophthor... [more]
A0A8K1CJ46_PYTOL4.010e-3345.10Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7R9U0C3_9STRA7.450e-3344.81Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A6A4G4Z6_9STRA1.160e-3242.24Methyltranfer_dom domain-containing protein n=2 Ta... [more]
K3WE72_GLOUD1.210e-3144.37Methyltransf_25 domain-containing protein n=1 Tax=... [more]
A0A0P1AKS5_PLAHL1.510e-2842.86Cyclopropane-fatty-acyl-phospholipid synthase n=1 ... [more]
A0A3R7J935_9STRA3.440e-2843.79HP domain-containing protein n=3 Tax=Phytophthora ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11939contigH-paniculata_contig11939:173..5009 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score225.3
Seed ortholog evalue2.8e-56
Seed eggNOG ortholog2880.D7FNN4
Hectar predicted targeting categoryother localisation
EggNOG free text desc.methyltransferase activity
EggNOG OGs2S237@2759,COG0500@1
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-01_004860.1
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1547
Cds size684
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928909.7236426-UTR-H-paniculata_contig11939:172..3341622928909.7236426-UTR-H-paniculata_contig11939:172..334Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11939 173..334 +
1691480663.6718807-UTR-H-paniculata_contig11939:172..3341691480663.6718807-UTR-H-paniculata_contig11939:172..334Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11939 173..334 +
1622928909.7993152-UTR-H-paniculata_contig11939:4308..50091622928909.7993152-UTR-H-paniculata_contig11939:4308..5009Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11939 4309..5009 +
1691480663.7356238-UTR-H-paniculata_contig11939:4308..50091691480663.7356238-UTR-H-paniculata_contig11939:4308..5009Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11939 4309..5009 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928909.7355502-CDS-H-paniculata_contig11939:334..5081622928909.7355502-CDS-H-paniculata_contig11939:334..508Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11939 335..508 +
1691480663.6836882-CDS-H-paniculata_contig11939:334..5081691480663.6836882-CDS-H-paniculata_contig11939:334..508Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11939 335..508 +
1622928909.7473786-CDS-H-paniculata_contig11939:2027..21141622928909.7473786-CDS-H-paniculata_contig11939:2027..2114Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11939 2028..2114 +
1691480663.6930242-CDS-H-paniculata_contig11939:2027..21141691480663.6930242-CDS-H-paniculata_contig11939:2027..2114Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11939 2028..2114 +
1622928909.7595823-CDS-H-paniculata_contig11939:2466..25411622928909.7595823-CDS-H-paniculata_contig11939:2466..2541Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11939 2467..2541 +
1691480663.703609-CDS-H-paniculata_contig11939:2466..25411691480663.703609-CDS-H-paniculata_contig11939:2466..2541Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11939 2467..2541 +
1622928909.7713177-CDS-H-paniculata_contig11939:3551..36961622928909.7713177-CDS-H-paniculata_contig11939:3551..3696Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11939 3552..3696 +
1691480663.7136707-CDS-H-paniculata_contig11939:3551..36961691480663.7136707-CDS-H-paniculata_contig11939:3551..3696Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11939 3552..3696 +
1622928909.7840397-CDS-H-paniculata_contig11939:4105..43081622928909.7840397-CDS-H-paniculata_contig11939:4105..4308Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11939 4106..4308 +
1691480663.722691-CDS-H-paniculata_contig11939:4105..43081691480663.722691-CDS-H-paniculata_contig11939:4105..4308Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11939 4106..4308 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11939.1234.1prot_H-paniculata_contig11939.1234.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig11939 335..4308 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig11939.1234.1

>prot_H-paniculata_contig11939.1234.1 ID=prot_H-paniculata_contig11939.1234.1|Name=mRNA_H-paniculata_contig11939.1234.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=228bp
MTCPSSLTPGPVSHRCCVRMTANNFLSMANGGDCVGEKLAPFNPSGDEVI
RTAIDMLQVGHADVVYDLGCGDGRMLIEAIKTSGARGVGVEYDKRFADRA
HQRVAEAGLGSKITIIHANVLDIDPTGATAVFVYLIPAGMLAVREALVAL
LKAGARVVTYVFSMPDLVPVRVETFKATKIYLYTATSLGNASSLEDVSEA
SSFKNVSEASSMEWASSTSDQAQDNPA*
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mRNA from alignment at H-paniculata_contig11939:173..5009+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig11939.1234.1 ID=mRNA_H-paniculata_contig11939.1234.1|Name=mRNA_H-paniculata_contig11939.1234.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4837bp|location=Sequence derived from alignment at H-paniculata_contig11939:173..5009+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAACCTCGTCGTGTAAAGAGTGCTTTCGAAGCATCAAATGATGGAGTCAA ATTTCGCCCTTTCTCTCGTCCATCGAGGCTAAATTACTTCTCACAAGCTC CCTTCTTCCTTCCGTCTTGAAACAACTTGTCAACTTCAACTTTTATTATA CAAGAATGGGAAATGACTTGTCCATCAAGTTTGACCCCCGGCCCGGTATC ACATCGATGTTGTGTTCGCATGACCGCCAACAATTTTCTTTCAATGGCCA ACGGTGGGGATTGCGTAGGCGAGAAGCTCGCGCCCTTCAATCCAAGCGGG GATGAGGTCATACGCACCGCAATCGACATGCTGCAGGTCTGTTTGAGTGG CGTCGCAGTCAGAGTACCCCGTCGAACTCGCTCAACAGATACACACAAAC ATTAGTCAATTAGGGCAAAACGAGGAACAGAAAACACATAACATGAGAGG AGAGTATTTCAAACTTCAATAACGAATGGTCAACGATATGCGTAGTGTTG TTGAAGGCAACAAGCTTTGAGATATTTTCTGGCATAGCCGCTCTTGTGCG GTCTCAACCGACGTCGTGTACCATAGATTGGTACCAGTATATGCATTCAC TGGTAGCTTAGTAGTGTAACTTGTAATGTAGATACAGTATAGAACAGTAT CAGTACAGAGGAACATGTAACACAGCACACGAGAGGAGGATAATTCAAAC TTCAATAACGAAGGTGCCAACAATGCGGTGTGCATAGCATAGTTGTAGAT AAGCGTTGAAATGTATTCAGTTTAGCTGCCCCCTCCTGCGGCCTTAACCG ACGACGTGTGCTGTAGATTGGTCTGTGCATCAACTACGCCGTGGTGCTTG CTGCGGCTAAACCATCATGTTTGTCACCACGTAATCTAGACTCTAAATGC CCTAAATGCCGTTTTTTATCTCAACGCAAGTAAAGCATCGTACGTAGTAC GGAAGTGCGCAAAACATTGGATAGACAATCAAATGCACAAGTCGCGTTAG TGAGCCCAAATTTAGCGTACAAATAGCGTCAACCTGACCCTCTACCGCTA TGAAAGGGTCTACTCTCGTGCACTGTTGGCCTACAATGGCACCGCTGTTG TTGTAGTAATAGCCTAATTCACGTCGGGACCGCGACGCGACGAAAAAGAA GTGTGATTTCAGTTTTAAGCGAAGGTCAGGCAGCCATGCAACCTCCCCCG AAGCCCCCGACACCACTACAATTCCAACAAACCAGTCCCTGATTATTTCT CCTCCTGAGAATAAATGACGTTTTTCTGGTGTGTCTCCCTAGTCTTGCCC TTGCAGCCATGCAGGAACACCAGATTTCAAAGAATCCGACGCGAGCCGGT TCCTCTCTTTGGTCTTGATGTTCCCTGCCGCCAAAAAGATCTGCTCTGAC GATACATATGTCGCAGGTATCGTCAATTACATACAAAACACCTTGAATAG CACGGGGTAGACTTCCTGGCGCGTGAGCCACCATTCTAGGACATCCTTCG AGGTTGATGTTGGCTCAAGGGTATCCTCGGCCTCTTAGCGGGATAATTCG TATCTGATCGCGGTCTCGCGTTGCGCCGCAGTCGTCGAAGCAGAAGCACC TGTTGCCTCGCTGACGTTGAAAACGTCGTTGAGGCGGTTCAGGATGGCAA AGAGGGTTAAGGCCTAGTTGAAGGCGGTATTCAGCCGCTTGCGGCGGTTC TCCGGCACGGAACCAGTTGCCGCTGATCCTGTGCGGCCGGCTGCCAGCCA AACGTATTATATAACCACGGGACGGTACTTGGTAGCCCTCTTCTACGTCA GTGTTCAGAATTGATATACGACGATTACTATTGCGTTCGAACGTGCTGTA TGTAGGTTGGGCACGCGGATGTGGTGTACGATCTCGGGTGTGGCGACGGG CGAATGCTCATCGAGGCCATCAAGACATCAGGAGCTCGCGGCGTAAGTAT GTTAGTTTGCACCACCTCTGCACCCAGGGGTAGCTGTGATACATGATCGA TCACGAATCCGTCGGTGACACTGATTGTCCCGTTATACTGGTACGCAAGA TACCCTATAGCACTGCAACATTGTCAAGTTTTTTTCGTTATCAGCAGTGC TGTGTGTGCCCCCAGCTTTGTGAAACTGTCTGAACGCTTGGTGGTTGTAT ACACAAAGCGACTACTAGAGCGCATCATGTTTTTTTGTGCATATCGCGTG GGAATATGGCTTTGCTCCCGAGGCATATTGTCTAAAGCGGATCATATCCT GGCTCCCCATTTTTACGTACCTTGCGGTGATTATCGGGACACAGGTTGGT GTGGAGTACGACAAGCGATTCGCAGATCGAGCGCATCAACGGGTTGCTGA GGCCGGGTTGGGAAGTAAGGTGCGAGTACGGAAGGAGAGCAACCAGCGCT GGAAAAACCTTTACTGATTGCACGCCTATGCAGATACACTGTAATCGCGT AACCTCTGTCACTGACGAAATAACAAATTAACAACGGAAATTTGATCGAC CTTCACGGCCATCCTACTATAGGGGAAAGTCAATTGCTCAACGAAGGTTG CTTCGCTAAAGACGCATCAATTACGCAGTTCTAAACCATGGCAATTGCCT GTGTTTCTGCATCCCTAAAGGTGCACAGTCCACGAGTTGAAATAGGATTT CTGTTGAAGGGGGGAGAACAATTGCGAAAAACAGAAGTCCCGATCCCCTT CTGAAAGGGGCTCCTTTGTTAAACAAAGCGGCTCAATACCCCCCCCCCCC CCCTACTGTAGTATAACCCTTCAACATTTTTGACGAACGGCGAGTTGTAA GCAGACAGGTAGGAAGCTGTGGATAGAGTGGTGAAGTGGATTTTCCCCAG GTTAGTGCGTTGTTGGAAAGTGTGGTTGACAGACTAGTTGATGGAAGGTC GTTTTCTTCCAAGCTTCAGTTGATTCGTAACCTCTCTCGCTCCTGTCGAT ATGGTACGAAGTGTGCCGCAAAATTAACATGTTCTACTTATTTATATTTC GAACAACAATTGAGTGGAGTGTCCAGAGTGCGGTCGAGGGTCGAGGGTCG AGGGGGGGTCGGGGGTCGGGGTGGGATTCAACGTTGGGGTTTCCTTCCTA TCGCCTAGTGTCCTTCCTTCACAAAAACGCTTACTCCAGACGCAGCGTAG ATCGATACTATTCCTAAGAAAACAACTGTGACTCTAAGAGTGTTATCGTA CCACCTCCGAATACTCCCCGAATGGGTGGTAAAAATAGCTGGGTCTGTTA GATGTCTTGAGATAAACAGGCAGGGGGGTCTAGCCCGGGTCTATTATTTG TATACTATCATCACCAGCATGTTTATCCTCGTTGTACTTGACTAACATGC ATGGCTCACTTGTTCAATTACATACACAGATAACGATCATACATGCCAAT GTCTTGGACATTGATCCGACCGGAGCAACGGCTGTTTTCGTGTATCTCAT CCCGGCCGGTATGCTGGCCGTGAGGGAAGCCCTGGTCGCGCTTCTCAAGG CGGGGGCAAGGGTGGTCACGTACGGTGAGTGGTTGTCGGCACCTTGCAAG TACATGCTCATGGCAGAAAAGTCGTCATATCTAGGGATAGGTGTTGTTCA TGCTGTACAAACGCCAGGTATTACAACGGGAAAGAAAAAATGGTCGCTTG TTCGAATGTCACTCGCCTGTCAACTCTCGGGCGCTTTCATGTTTGTTTGT CAGCACAGTTTGGACAGTAAGCGTGAAACGATTGTTCTCTTCCTTTGCTA AGGATATCCGGCGCCGTCAAGAACGGACGTCAGATGGCAAATACAGCAAG CAAATCGTTTGTCCAGTAGATCAGAAGATTTAGATGCACTTTGTTTTTTT TGTACCTAAATGCTAAAAGTTCACCATCTCTACTTGAGGCCTCCTTTTCA CCATCCTTCGCCCCCTCAACCCTCATGTGCCAGTTTTTTCGATGCCGGAC CTCGTGCCTGTTCGAGTGGAAACGTTCAAGGCAACCAAGATATATCTCTA TACCGCCACCTCATTGGGCAATGCCTCGTCATTGGAAGATGTTTCCGAGG CCTCCTCGTTCAAAAATGTTTCCGAGGCCTCCTCAATGGAATGGGCTTCA TCCACTTCGGATCAAGCGCAAGATAATCCGGCGTAAGCCCCAGCATGAAG TGCTGGGTACCCAATAGTGTAAAGGCTGTGCAAAGAGGTCACTCTGTGGT GATTGACTGCAGATGCCAACCTTGTGTTTCGTGTGACGTGTAGTGAGTAA TACAGAGCCAGTCCGAGCTCGAACGTCGGCATTAAATTATTCTGCTTACA GGGGTCTGGGAGCTTGTAGCGGGATAGGCCAAATGTTACGGTAAATCCTA TATGCTTAGTTGAGTATAAAATACGGTGGGCGTACAATTGAACGGTTGAT TGTTGCAGCAGGACGTGGGCAGGATCGACTTTGGGGTCTCGTGTAAATGA TGTTGTTCTTGTTCTTGATTGTTGTGAACAAAAATTGATCCGGGAGGAGT GTTGTGGATGCAGTGACGCGGTGGGGGGCGGAGAGGCGGGACTATAGAAG TAGAACAATGCGAGCCCTCAGCTCATGTTCCACCCATGCCGATATTGATC CGATATTGATGAGAATTGCATGCACTCTTCTGTCTCAGCACTTTCTGCTT TTCACACGAAACACCGCGGGCTCAGGACGATGAATTGCATCTACAGTCAA GTAATATTTGACTTGAAGGCGGTGCCCAGCAAAAAGCATTAGAATAGGTC AAAACTCACAGCCGTCACCGTTTCTTCTCGGCATCATAGATTGAAGATTA GAGCGGGGGGGAACAACTGGGCGTTGGCAAATACAAG
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Coding sequence (CDS) from alignment at H-paniculata_contig11939:173..5009+

>mRNA_H-paniculata_contig11939.1234.1 ID=mRNA_H-paniculata_contig11939.1234.1|Name=mRNA_H-paniculata_contig11939.1234.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1368bp|location=Sequence derived from alignment at H-paniculata_contig11939:173..5009+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACTTGTCCATCAAGTTTGACCCCCGGCCCGGTATCACATCGATGTTG
TGTTCGCATGACCGCCAACAATTTTCTTTCAATGGCCAACGGTGGGGATT
GCGTAGGCGAGAAGCTCGCGCCCTTCAATCCAAGCGGGGATGAGGTCATA
CGCACCGCAATCGACATGCTGCAGATGACTTGTCCATCAAGTTTGACCCC
CGGCCCGGTATCACATCGATGTTGTGTTCGCATGACCGCCAACAATTTTC
TTTCAATGGCCAACGGTGGGGATTGCGTAGGCGAGAAGCTCGCGCCCTTC
AATCCAAGCGGGGATGAGGTCATACGCACCGCAATCGACATGCTGCAGGT
TGGGCACGCGGATGTGGTGTACGATCTCGGGTGTGGCGACGGGCGAATGC
TCATCGAGGCCATCAAGACATCAGGAGCTCGCGGCGTTGGGCACGCGGAT
GTGGTGTACGATCTCGGGTGTGGCGACGGGCGAATGCTCATCGAGGCCAT
CAAGACATCAGGAGCTCGCGGCGTTGGTGTGGAGTACGACAAGCGATTCG
CAGATCGAGCGCATCAACGGGTTGCTGAGGCCGGGTTGGGAAGTAAGGTT
GGTGTGGAGTACGACAAGCGATTCGCAGATCGAGCGCATCAACGGGTTGC
TGAGGCCGGGTTGGGAAGTAAGATAACGATCATACATGCCAATGTCTTGG
ACATTGATCCGACCGGAGCAACGGCTGTTTTCGTGTATCTCATCCCGGCC
GGTATGCTGGCCGTGAGGGAAGCCCTGGTCGCGCTTCTCAAGGCGGGGGC
AAGGGTGGTCACGTACGATAACGATCATACATGCCAATGTCTTGGACATT
GATCCGACCGGAGCAACGGCTGTTTTCGTGTATCTCATCCCGGCCGGTAT
GCTGGCCGTGAGGGAAGCCCTGGTCGCGCTTCTCAAGGCGGGGGCAAGGG
TGGTCACGTACGTTTTTTCGATGCCGGACCTCGTGCCTGTTCGAGTGGAA
ACGTTCAAGGCAACCAAGATATATCTCTATACCGCCACCTCATTGGGCAA
TGCCTCGTCATTGGAAGATGTTTCCGAGGCCTCCTCGTTCAAAAATGTTT
CCGAGGCCTCCTCAATGGAATGGGCTTCATCCACTTCGGATCAAGCGCAA
GATAATCCGGCGTAATTTTTTCGATGCCGGACCTCGTGCCTGTTCGAGTG
GAAACGTTCAAGGCAACCAAGATATATCTCTATACCGCCACCTCATTGGG
CAATGCCTCGTCATTGGAAGATGTTTCCGAGGCCTCCTCGTTCAAAAATG
TTTCCGAGGCCTCCTCAATGGAATGGGCTTCATCCACTTCGGATCAAGCG
CAAGATAATCCGGCGTAA
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