prot_H-paniculata_contig5060.12331.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5060.12331.1
Unique Nameprot_H-paniculata_contig5060.12331.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length619
Homology
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BLAST of mRNA_H-paniculata_contig5060.12331.1 vs. uniprot
Match: A0A6H5KXM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXM5_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 1.740e-21
Identity = 174/207 (84.06%), Postives = 183/207 (88.41%), Query Frame = 0 
Query:  407 SNETGQRERP--VQGCRDMGCRRRPLYAFKGARKAVRCPLHRLQDMVNVRHPLCQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYAMTGQRXXXXXXXXXXXXXXXXXXXXXYEEGCNRHPSFGWKKIDGKARRCAHHRLEGMESVKVHRR 611
            S ETG    P   Q CRD+GC RRP+YAFKG  KA+ CP+HR  +MVNVRHPL   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYAM GQR  XXXXXXXXXXXXXXXXXXX+E GC+RHPSFGWK+ DGKARRCAHHRLEGMESVKV+ R
Sbjct:  601 SKETGTTVAPKGAQACRDVGCHRRPIYAFKGDTKALCCPIHRSAEMVNVRHPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYAMAGQRAMXXXXXXXXXXXXXXXXXXXFEGGCDRHPSFGWKQGDGKARRCAHHRLEGMESVKVNNR 807
[Close]
BLAST of mRNA_H-paniculata_contig5060.12331.1 vs. uniprot
Match: D8LBV0_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBV0_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 1.190e-13
Identity = 58/68 (85.29%), Postives = 62/68 (91.18%), Query Frame = 0 
Query:  544 LYAMTGQRXXXXXXXXXXXXXXXXXXXXXYEEGCNRHPSFGWKKIDGKARRCAHHRLEGMESVKVHRR 611
            LYAM GQR  XXXXXXXXXXXXXXXXXXX+E GC+RHPSFGWK+ DGKARRCAHHRLEGMESVKV+ R
Sbjct:   57 LYAMAGQRAMXXXXXXXXXXXXXXXXXXXFEGGCDRHPSFGWKQGDGKARRCAHHRLEGMESVKVNNR 124
[Close]
BLAST of mRNA_H-paniculata_contig5060.12331.1 vs. uniprot
Match: D8LBU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBU9_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 5.160e-10
Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 0 
Query:  407 SNETGQRERP--VQGCRDMGCRRRPLYAFKGARKAVRCPLHRLQDMVNVRHPLCQN 460
            S ETG    P   Q CRD+GC RRP+YAFKG  KA+ CP+HR  +MVNVRHPLC++
Sbjct:  443 SKETGTTVAPKGAQACRDVGCHRRPIYAFKGDTKALCCPIHRSAEMVNVRHPLCRH 498
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5060.12331.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KXM5_9PHAE1.740e-2184.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBV0_ECTSI1.190e-1385.29EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LBU9_ECTSI5.160e-1060.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY101447Formin homology 2 domain (FH2 domain)coord: 76..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5060contigH-paniculata_contig5060:1917..13552 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5060.12331.1mRNA_H-paniculata_contig5060.12331.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5060 1454..13634 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5060.12331.1 ID=prot_H-paniculata_contig5060.12331.1|Name=mRNA_H-paniculata_contig5060.12331.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=619bp
MELARERLRDIMIIIADADQTSSGNRCTLAGRKLETAGATAPRWYLERLL
EERSSLIQEILAGLGLKPVAPPPPQPPPPPPPPPPSAQSKQPTVRLLPPS
VTTACASSSWSSTTMTRVHEIEHGNGDATEKRRRLLQPTSPPCAARPCRN
ESIVDETAFSWEQWSGLDGVLPLERTPPVLLPPPPKTATPNPTRVAMGSQ
VNPQIPDVAMIFSVEPPAARDFDGHCGRSALPPASSLSSSGGGGGGGAWS
RHSLAAAVSAAAGGLTKQPLRDSQAVQHEEQQSPLSNARQQRSGACSDSS
CITTTMAVQEDSSFSTPTKITTSKPMSYGIANGFGNAGGLPALRDDGDRW
IAPSWAEVKQTGAKKLAAAAAAAAASGRIDRDPQLAKQSSNPAISIGPAD
SSREPNSNETGQRERPVQGCRDMGCRRRPLYAFKGARKAVRCPLHRLQDM
VNVRHPLCQNESCFRQPSFGVEGDQRASFCSEHRLPDMVNVSSRRCRAPQ
CLRHPNFGHPGDRRASYCCGHKAPGMVDVVSRRCQRPQCMRRPLYAMTGQ
RASFCSAHKDPGMVDVVSSRCQYEEGCNRHPSFGWKKIDGKARRCAHHRL
EGMESVKVHRRTNPKAHP*
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