prot_H-paniculata_contig50384.12290.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig50384.12290.1
Unique Nameprot_H-paniculata_contig50384.12290.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length150
Homology
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BLAST of mRNA_H-paniculata_contig50384.12290.1 vs. uniprot
Match: A0A178U605_ARATH (ULP_PROTEASE domain-containing protein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=A0A178U605_ARATH)

HSP 1 Score: 52.0 bits (123), Expect = 7.670e-5
Identity = 27/74 (36.49%), Postives = 43/74 (58.11%), Query Frame = 0 
Query:   76 VLSVDSEGLEYSEVGGMEIWICDNGATKHMAHNSDFLCDYQQCDGHVRLADGKCLPIEGVGMLFLQFRFDSEVF 149
            ++S+   G+ +S        + D+GA+ HM  NS+ L + +   GHV +A+G  +PIEG+G L L F  DS+ F
Sbjct:  323 IVSLKESGITFSSQTSSSSIVIDSGASHHMISNSNLLDNIEPALGHVIIANGDKVPIEGIGNLKL-FNKDSKAF 395
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig50384.12290.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A178U605_ARATH7.670e-536.49ULP_PROTEASE domain-containing protein n=1 Tax=Ara... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 38..58
NoneNo IPR availableGENE3D4.10.60.10coord: 1..31
e-value: 7.5E-6
score: 27.7
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 15..30
score: 8.944
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 4..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig50384contigH-paniculata_contig50384:654..1103 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig50384.12290.1mRNA_H-paniculata_contig50384.12290.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig50384 654..1103 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig50384.12290.1 ID=prot_H-paniculata_contig50384.12290.1|Name=mRNA_H-paniculata_contig50384.12290.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=150bp
RSKDHLQRDCPNVYCRRCGKRGHDLNACPQLVNEDACLAEAEIEIEFEEA
LKVDLDEEEFMASYIASTSTTNKGEVLSVDSEGLEYSEVGGMEIWICDNG
ATKHMAHNSDFLCDYQQCDGHVRLADGKCLPIEGVGMLFLQFRFDSEVF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf