prot_H-paniculata_contig497.12165.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig497.12165.1
Unique Nameprot_H-paniculata_contig497.12165.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length46
Homology
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BLAST of mRNA_H-paniculata_contig497.12165.1 vs. uniprot
Match: A0A6H5KJV3_9PHAE (PsbP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJV3_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 3.960e-13
Identity = 33/47 (70.21%), Postives = 40/47 (85.11%), Query Frame = 0 
Query:    1 MHNLGVIAARGSTLFTVTVVAPEESW--RNDRGEKYRQLARSFRLTY 45
            M N+GV+AARGSTLFTVTV+APEESW  +  RGEK+RQ+A SFRL +
Sbjct:  557 MRNVGVVAARGSTLFTVTVLAPEESWGGKGGRGEKFRQMANSFRLAF 603
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BLAST of mRNA_H-paniculata_contig497.12165.1 vs. uniprot
Match: D8LPY6_ECTSI (PsbP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY6_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 5.400e-13
Identity = 33/47 (70.21%), Postives = 40/47 (85.11%), Query Frame = 0 
Query:    1 MHNLGVIAARGSTLFTVTVVAPEESW--RNDRGEKYRQLARSFRLTY 45
            M N+GV+AARGSTLFTVTV+APEESW  +  RGEK+RQ+A SFRL +
Sbjct:  461 MRNVGVVAARGSTLFTVTVLAPEESWGGKGGRGEKFRQMANSFRLAW 507
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BLAST of mRNA_H-paniculata_contig497.12165.1 vs. uniprot
Match: A0A4D9CU31_9STRA (PsbP domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU31_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 2.810e-5
Identity = 26/46 (56.52%), Postives = 34/46 (73.91%), Query Frame = 0 
Query:    1 MHNLGVIAARG--STLFTVTVVAPEESWRNDRGEKYRQLARSFRLT 44
            +H+L VIA R   STLFT+TV+APE  W  DR ++ R++A SFRLT
Sbjct:  226 LHSLSVIAPREEESTLFTLTVLAPERRWE-DREKELREVASSFRLT 270
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig497.12165.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KJV3_9PHAE3.960e-1370.21PsbP domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LPY6_ECTSI5.400e-1370.21PsbP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A4D9CU31_9STRA2.810e-556.52PsbP domain-containing protein n=1 Tax=Nannochloro... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichGENE3D3.40.1000.10coord: 1..43
e-value: 2.1E-6
score: 29.7
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichSUPERFAMILY55724Mog1p/PsbP-likecoord: 2..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig497contigH-paniculata_contig497:36647..36784 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig497.12165.1mRNA_H-paniculata_contig497.12165.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig497 36647..36784 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig497.12165.1 ID=prot_H-paniculata_contig497.12165.1|Name=mRNA_H-paniculata_contig497.12165.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=46bp
MHNLGVIAARGSTLFTVTVVAPEESWRNDRGEKYRQLARSFRLTY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016123Mog1/PsbP_a/b/a-sand