prot_H-paniculata_contig4954.12142.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4954.12142.1
Unique Nameprot_H-paniculata_contig4954.12142.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length170
Homology
[Close]
BLAST of mRNA_H-paniculata_contig4954.12142.1 vs. uniprot
Match: D7G453_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G453_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 2.440e-45
Identity = 70/98 (71.43%), Postives = 81/98 (82.65%), Query Frame = 0 
Query:   72 IDGVGGSGSNVLLAVAVALVMKGLLLPEEVRHLSFCPSEDPIRGRDTLPWRMMEESGRKCGSISEVSLQYLASPLAFPGTPEWGTMLNVKEDMMKEGW 169
            + GVG  GSNVLL VA  +V+KGLLLPE VRHL FCP+EDPIRGRDTLPWRMM ESGR+CG+I EV  +Y+ +PLAFPGTPEWG MLN KED+ K+ W
Sbjct:  110 MSGVGSVGSNVLLLVASVMVVKGLLLPENVRHLGFCPTEDPIRGRDTLPWRMMIESGRECGTIPEVMTKYVTAPLAFPGTPEWGMMLNTKEDLAKDAW 207
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4954.12142.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G453_ECTSI2.440e-4571.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4954contigH-paniculata_contig4954:6107..12863 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4954.12142.1mRNA_H-paniculata_contig4954.12142.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4954 6013..13083 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4954.12142.1 ID=prot_H-paniculata_contig4954.12142.1|Name=mRNA_H-paniculata_contig4954.12142.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=170bp
MTFPTAGAADAAAHAFDPWRTPGFSASGRRLSSPKASFTPRTTTLTTTTT
TQLRASGGIGDSDSDAPTHKRIDGVGGSGSNVLLAVAVALVMKGLLLPEE
VRHLSFCPSEDPIRGRDTLPWRMMEESGRKCGSISEVSLQYLASPLAFPG
TPEWGTMLNVKEDMMKEGW*
back to top