prot_H-paniculata_contig49496.12135.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig49496.12135.1
Unique Nameprot_H-paniculata_contig49496.12135.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length90
Homology
BLAST of mRNA_H-paniculata_contig49496.12135.1 vs. uniprot
Match: A0A6H5JBN2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBN2_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 4.310e-19
Identity = 41/89 (46.07%), Postives = 62/89 (69.66%), Query Frame = 0
Query:    3 VHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRIMQRTFVDTVVKRFDVETESNLPASQQADLGPRRENE 90
            ++VDD++VAG    C+ L A+L  +F T   GE +W+ GCA  RD+  G ++I Q  ++D++VKRFDV++ S +PAS   DLGP+R+NE
Sbjct:  662 IYVDDILVAGSDEDCEELLASLNKKFPTRNVGECEWFDGCAIERDVEAGNLKISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDNE 750          
BLAST of mRNA_H-paniculata_contig49496.12135.1 vs. uniprot
Match: A0A6H5JYF4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF4_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 1.810e-18
Identity = 41/89 (46.07%), Postives = 61/89 (68.54%), Query Frame = 0
Query:    3 VHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRIMQRTFVDTVVKRFDVETESNLPASQQADLGPRRENE 90
            ++VDD++VAG    C+ L A+L  +F TT  GE +W  GCA  RD+  G + I Q  ++D++VKRFDV++   +PA+  ADLGP+RE+E
Sbjct:   89 IYVDDILVAGSDEDCEELLASLNKKFPTTNPGECQWLDGCAIVRDVEAGTLGISQTAYIDSMVKRFDVQSTYRIPATPGADLGPKREDE 177          
BLAST of mRNA_H-paniculata_contig49496.12135.1 vs. uniprot
Match: A0A6H5JJY0_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJY0_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 3.830e-18
Identity = 40/89 (44.94%), Postives = 61/89 (68.54%), Query Frame = 0
Query:    3 VHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRIMQRTFVDTVVKRFDVETESNLPASQQADLGPRRENE 90
            ++ DD++VAG    C+ L A+L  +F T   GE +W+ GCA  RD+  G +RI Q  ++D+++KRFDV++ S +PA+  ADLGP RE+E
Sbjct:  818 IYADDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMLKRFDVQSTSRIPATPGADLGPIREDE 906          
BLAST of mRNA_H-paniculata_contig49496.12135.1 vs. uniprot
Match: A0A6H5L663_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L663_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 4.830e-18
Identity = 39/87 (44.83%), Postives = 58/87 (66.67%), Query Frame = 0
Query:    3 VHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRIMQRTFVDTVVKRFDVETESNLPASQQADLGPRRE 88
            ++VDD++VAG    C+ L A+L  +F T   GE +W+ GCA  RD   G +RI    ++D++VKRFDV++ S +PAS   DLGP+R+
Sbjct:   68 IYVDDILVAGSDEDCEELLASLNKKFPTKNLGECEWFDGCAIERDFEAGTLRISHAAYIDSMVKRFDVQSASRIPASPGVDLGPKRD 154          
BLAST of mRNA_H-paniculata_contig49496.12135.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 5.170e-18
Identity = 40/89 (44.94%), Postives = 61/89 (68.54%), Query Frame = 0
Query:    3 VHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRIMQRTFVDTVVKRFDVETESNLPASQQADLGPRRENE 90
            ++VDD++VAG    C+ L A+L  +F T    E +W+ GCA  RD+  G +RI Q  ++D++VKRFDV++ S +PAS   DLGP+R++E
Sbjct:  486 IYVDDILVAGSDEDCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDDE 574          
BLAST of mRNA_H-paniculata_contig49496.12135.1 vs. uniprot
Match: A0A6H5K1V1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1V1_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 7.080e-18
Identity = 39/89 (43.82%), Postives = 59/89 (66.29%), Query Frame = 0
Query:    3 VHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRIMQRTFVDTVVKRFDVETESNLPASQQADLGPRRENE 90
            +HVDD++VAG    C+ L A+    F +   GE +W+ GCA  RD+  G ++I Q  ++D++VKRFDV+  S +PAS   DLGP+R++E
Sbjct:  502 IHVDDILVAGSDEDCEELLASFNKRFPSKNLGECEWFDGCAIERDVDAGALKISQTAYIDSMVKRFDVQWTSRIPASPGVDLGPKRDDE 590          
BLAST of mRNA_H-paniculata_contig49496.12135.1 vs. uniprot
Match: A0A6H5JSU5_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSU5_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 1.310e-17
Identity = 39/89 (43.82%), Postives = 60/89 (67.42%), Query Frame = 0
Query:    3 VHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRIMQRTFVDTVVKRFDVETESNLPASQQADLGPRRENE 90
            ++VDD++VAG    C+ L  +L+ E    + GE +W+ GCA  RD+  G +RI Q  ++D++VKRFDV++ S +PAS   DLGP R++E
Sbjct:  417 IYVDDILVAGSDEDCEELLPSLQQEISHQKLGECEWFDGCATERDVEAGTLRISQTAYIDSMVKRFDVQSTSRIPASPSVDLGPERDDE 505          
BLAST of mRNA_H-paniculata_contig49496.12135.1 vs. uniprot
Match: A0A6H5KV13_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV13_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 1.830e-17
Identity = 39/87 (44.83%), Postives = 60/87 (68.97%), Query Frame = 0
Query:    5 VDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRIMQRTFVDTVVKRFDVETESNLPASQQADLGPRRENE 90
            VDD++VAG    C+ L A+L  +F     GE +W+ GCA  RD+  G ++I +  ++D++VKRFDV++ S +PA+  ADLGP+RE+E
Sbjct: 1089 VDDILVAGSDEDCEELLASLNEKFLNNNLGECQWFDGCAIERDVEAGTLKISRTAYIDSMVKRFDVQSTSRIPATPGADLGPKREDE 1175          
BLAST of mRNA_H-paniculata_contig49496.12135.1 vs. uniprot
Match: A0A6H5JLS1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLS1_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 2.410e-17
Identity = 39/89 (43.82%), Postives = 61/89 (68.54%), Query Frame = 0
Query:    3 VHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRIMQRTFVDTVVKRFDVETESNLPASQQADLGPRRENE 90
            ++VDD++VA     C+ L A+L+ +F T   GE +W+  CA  RD+  G ++I Q T++D +VKRFDV++ S +PAS   DLGP+R++E
Sbjct:  357 IYVDDMLVAESDEDCEELLASLKKKFPTKNLGECEWFHRCAIERDVEAGTLKISQTTYIDNMVKRFDVQSTSRIPASPGVDLGPKRDDE 445          
BLAST of mRNA_H-paniculata_contig49496.12135.1 vs. uniprot
Match: A0A6H5K616_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K616_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 3.890e-17
Identity = 38/89 (42.70%), Postives = 60/89 (67.42%), Query Frame = 0
Query:    3 VHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRIMQRTFVDTVVKRFDVETESNLPASQQADLGPRRENE 90
            ++VDD++VAG    C+ L A+L  +F T   GE +W+ GCA  R +  G +RI Q  ++D++VKRF+ ++ S +PAS   DLGP+R++E
Sbjct:  113 IYVDDILVAGSDEDCEELLASLNKKFPTKNLGECEWFDGCAIERGVEAGTLRISQTAYIDSMVKRFEAQSTSLIPASPGVDLGPKRDDE 201          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig49496.12135.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBN2_9PHAE4.310e-1946.07Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JYF4_9PHAE1.810e-1846.07Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JJY0_9PHAE3.830e-1844.94CCHC-type domain-containing protein (Fragment) n=1... [more]
A0A6H5L663_9PHAE4.830e-1844.83Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JC10_9PHAE5.170e-1844.94Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K1V1_9PHAE7.080e-1843.82Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JSU5_9PHAE1.310e-1743.82Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KV13_9PHAE1.830e-1744.83CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JLS1_9PHAE2.410e-1743.82Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K616_9PHAE3.890e-1742.70Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig49496contigH-paniculata_contig49496:160..429 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig49496.12135.1mRNA_H-paniculata_contig49496.12135.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig49496 160..429 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig49496.12135.1 ID=prot_H-paniculata_contig49496.12135.1|Name=mRNA_H-paniculata_contig49496.12135.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=90bp
MCVHVDDVIVAGKSVKCDSLFAALRAEFQTTRGELKWYLGCAFWRDIVRG
VVRIMQRTFVDTVVKRFDVETESNLPASQQADLGPRRENE
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