prot_H-paniculata_contig4945.12130.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4945.12130.1
Unique Nameprot_H-paniculata_contig4945.12130.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length386
Homology
BLAST of mRNA_H-paniculata_contig4945.12130.1 vs. uniprot
Match: A0A6H5L7W1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W1_9PHAE)

HSP 1 Score: 244 bits (622), Expect = 4.700e-73
Identity = 156/404 (38.61%), Postives = 230/404 (56.93%), Query Frame = 0
Query:   27 RRVRSVGVAACLALVAVMLPLGRVSGFSAGEPIELEVTPGDTLEVPFEGINTGGLAVSFMQCTGDEYLSMSLSYNGT-LLSSSTLSSNECNRLIASGTTADEDEVSLDQLCAFRTSAAVRQGYTEKSVVVNATSFVSPGYVTVIMQNKGDIPASGELVMFTADRPAPNVDDTIDRVNTIAELDENTYTVTVDFQASANDDLSLCSSSSGCALYAYYLEVNDGIPNAEVNFGTTCQSEMGTLMYD-------------EIITT--ESTAT----------------------------------LATAAFTVRACLQFPAQVQAEYRVFLIVSPDTTSYSRVGFGLEDQLIFASPVLSVR-GDADVTCPEEVEETAAAGAVGRIV--PARATGAIALSLAAAATA 377
            R + S  VA  LAL++         GF  G+PI++ VT GDTL + FEG     +AVSF QC+GD Y+ M +S+NGT L++S+ + +++C R++    +AD+  +  D LCAFR S  V QGY E+S  +++T+ V P Y+T    N G I AS ++VMF+ + PAPN D+ IDRV    E + N +TV  +FQA   +D + C+   GC+L AYY+E++    +A+  FGTTCQ+  G L+Y+             E+I    E+TAT                                  L+T +F V AC++FP    A YR++++VSPDT SY+R GFG++DQL++AS  ++V   D+D  CPE V+E A +GA  R+V   +RA+ A+A  LA A  A
Sbjct:   53 RPMASSAVALLLALLSRNPRGADAQGFEYGDPIDVVVTAGDTLAMSFEGGLATAVAVSFQQCSGDVYMDMDVSFNGTSLVTSTAVETSKCVRVVGQSASADDSAIFYDNLCAFRNSGPVGQGYLEESAELSSTT-VDPEYITAQFTNTGTITASAQVVMFSTEYPAPNADEAIDRVVAEYEQEGNIFTVDAEFQADGTEDENFCAGDDGCSLAAYYIEIDTESGDADRIFGTTCQASNGVLLYEGFTGVGDSTFSDTEVIDDDEETTATDEVGVTDDEIAETTTDDAEAVLNGTGGARTRSRALSTTSFDVTACVEFPKNTGAVYRMYIVVSPDTDSYTRTGFGVQDQLMYASDQITVEEDDSDYECPEVVDEEAGSGARPRVVLTASRASTAVAAGLAVATAA 455          
BLAST of mRNA_H-paniculata_contig4945.12130.1 vs. uniprot
Match: D8LQ00_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ00_ECTSI)

HSP 1 Score: 220 bits (561), Expect = 4.150e-65
Identity = 136/358 (37.99%), Postives = 203/358 (56.70%), Query Frame = 0
Query:   73 FEGINTGGLAVSFMQCTGDEYLSMSLSYNGT-LLSSSTLSSNECNRLIASGTTADEDEVSLDQLCAFRTSAAVRQGYTEKSVVVNATSFVSPGYVTVIMQNKGDIPASGELVMFTADRPAPNVDDTIDRVNTIAELDENTYTVTVDFQASANDDLSLCSSSSGCALYAYYLEVNDGIPNAEVNFGTTCQSEMGTLMY---------------------------------DEIITTESTAT----------------LATAAFTVRACLQFPAQVQAEYRVFLIVSPDTTSYSRVGFGLEDQLIFASPVLSVR-GDADVTCPEEVEETAAAGAVGRIV--PARATGAIALSLAAAATA 377
            FEG     +AVSF QC+GD Y+ M +S+NGT L++S+ + +++C R++    +AD+  +  D LCAF+ S  V QGY E+S  +++T+ V P Y+T    N G + AS ++VMF+ + PAPN D+ IDRV    E + N +TV  +FQA   +D + C+  +GC+L AYY+E++    +A+  FGTTCQ+  G L+Y                                 DEI  T +  T                L+T +F V AC++FP    A YR++++VSPDT SY+R G+GL+DQL++AS  ++V   D+D  CPE VEE   +GA  R+V   +RA+ A+A  LA AA A
Sbjct:    3 FEGSLATAVAVSFQQCSGDVYMDMDVSFNGTSLVTSTAVETSKCVRVVGQSASADDSAIFYDNLCAFQNSGPVGQGYLEESAELSSTN-VDPEYITAQFTNTGTVTASAQVVMFSTEYPAPNSDEAIDRVVAEFEQEGNIFTVDAEFQADGTEDENFCAGDNGCSLAAYYIEIDTESDDADRIFGTTCQATNGVLLYEGFTGVGDSTFSDTEVIGDDGETTATDEVGVTDDEIAETTTDDTEAVLNGAGGARTRSRALSTTSFDVSACVEFPKNTGAVYRMYIVVSPDTDSYTRTGYGLQDQLMYASDQITVEEDDSDYECPEVVEEEEGSGARPRVVLTASRASTAVAAGLAVAAAA 359          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4945.12130.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L7W1_9PHAE4.700e-7338.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ00_ECTSI4.150e-6537.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 31..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4945contigH-paniculata_contig4945:6024..13760 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4945.12130.1mRNA_H-paniculata_contig4945.12130.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4945 5240..14757 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4945.12130.1 ID=prot_H-paniculata_contig4945.12130.1|Name=mRNA_H-paniculata_contig4945.12130.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=386bp
MVSTCSRAMTARAAGVSNEHVNAVVRRRVRSVGVAACLALVAVMLPLGRV
SGFSAGEPIELEVTPGDTLEVPFEGINTGGLAVSFMQCTGDEYLSMSLSY
NGTLLSSSTLSSNECNRLIASGTTADEDEVSLDQLCAFRTSAAVRQGYTE
KSVVVNATSFVSPGYVTVIMQNKGDIPASGELVMFTADRPAPNVDDTIDR
VNTIAELDENTYTVTVDFQASANDDLSLCSSSSGCALYAYYLEVNDGIPN
AEVNFGTTCQSEMGTLMYDEIITTESTATLATAAFTVRACLQFPAQVQAE
YRVFLIVSPDTTSYSRVGFGLEDQLIFASPVLSVRGDADVTCPEEVEETA
AAGAVGRIVPARATGAIALSLAAAATARGAGIMEL*
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