prot_H-paniculata_contig4925.12102.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4925.12102.1
Unique Nameprot_H-paniculata_contig4925.12102.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length588
Homology
BLAST of mRNA_H-paniculata_contig4925.12102.1 vs. uniprot
Match: A0A6H5JG15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG15_9PHAE)

HSP 1 Score: 292 bits (748), Expect = 3.190e-83
Identity = 227/501 (45.31%), Postives = 267/501 (53.29%), Query Frame = 0
Query:    6 GSGGTS---SVPRSERLCKVLPKVMDTAIKGVRDLDEQVFEQMMQXXXXXXXXXXXXXXXXXXXXXXXXX------------VVARDGGGEFFAQSPAPGRPASFFRL-GEPQTP--------RRTSVVATGSTGFVR-GSPPESTRDRRMNARAKQTPPAPLVTAIPATGP------STIKNPGTPGRGRGIGGAAAGAVMGVGEWWANTFTPTGNRYVIV-AERIFRGILDLSIVRMVVPRKRTNSDQGAASTTPAAPAQAAE---RQDILSFEGSAEEVLRYTIVAKSYLIRSRSRRHGEGTP-SPSKLIKSPGGIDTVVSEGDDNDMRAATKELLDLKTRYMTATQHWLKTDIVNDEELRMIRAQVFEAIQRKRSELHREAAAVLRAERVASEAQQATALKSRPNNNSADDGDMSGGGVAASPNTSTPDNAQCMSHDATTMAV----------------RDEDATRTISMLGGTADLLKFSRLLLLLSEAIAVSASV 454
            G G TS   S+P SERLCKVLPKVM+TAI+GV+DLDEQVFEQMM+                                     VVARDGGGEFFAQSPAPGRPASFFRL GEP+TP        RRTS  ++GS   VR  SP ++T  +++    KQ        A  A  P      + +K P + G         AG   G G+W A  FTP G       + R     +                D+G A   PA P  +       D LSFEGS EEVLRYTIVAKSYLIRS+S++HGE    SP K + SPGG +  V EG + D+R  T+ELLDLK+RYM +TQHWLKTDIVNDEELRMIRAQVFEAIQRKRSELH EAAAVLRAE V  E+ +        + +S   GD                                               +E+A RTI+ML GTA+ LKFSRLLLLLSEAI+VS SV
Sbjct:  628 GEGITSRPRSIPHSERLCKVLPKVMETAIRGVKDLDEQVFEQMMRTASERSSGMSMSMSSLSSPAHGGSLPLGTPARRLSSCVVARDGGGEFFAQSPAPGRPASFFRLMGEPKTPARGDGSALRRTSSGSSGSIKVVRTASPWDATPMKKILTGGKQ---GKKAAAAAAATPHRNARETPLKTPRSGG---------AGGFFGAGDWLAAAFTPRGALAPDPESPRAPASEVPKQXXXXXXXXXXVEKDEGIAPLAPAQPISSFRPPPEADALSFEGSTEEVLRYTIVAKSYLIRSKSKKHGESREASPIKSLFSPGGTERRVEEGGEEDVRHLTQELLDLKSRYMASTQHWLKTDIVNDEELRMIRAQVFEAIQRKRSELHTEAAAVLRAESVLEESLRLQHSGGSNSKSSRGCGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEEANRTIAMLEGTAEFLKFSRLLLLLSEAISVSNSV 1116          
BLAST of mRNA_H-paniculata_contig4925.12102.1 vs. uniprot
Match: D7G4K0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K0_ECTSI)

HSP 1 Score: 232 bits (592), Expect = 1.090e-62
Identity = 202/484 (41.74%), Postives = 240/484 (49.59%), Query Frame = 0
Query:   12 SVPRSERLCKVLPKVMDTAIKGVRDLDEQVFEQMMQXXXXXXXXXXXXXXXXXXXXXXXXX------------VVARDGGGEFFAQSPAPGRPASFFRL-GEPQTPRR---TSVVATGSTGFVR----GSPPESTRDRRMNARAKQTPPAPLVTAIPATGPSTIKNPGTPGRGRGIGGAAAGAVMGVGEWWANTFTPTGNRYVIVAERIFRGILDLSIVRMVVPRKRTNSDQGAASTTPAAPAQAAERQDILSFEGSAEEVLRYTIVAKSYLIRSRSRRHGEGTP-SPSKLIKSPGGIDTVVSEGDDNDMRAATKELLDLKTRYMTATQHWLKTDIVNDEELRMIRAQVFEAIQRKRSELHREAAAVLRAERVASEAQQATALKSRPNNNSADD------------------GDMSGGGVAASPNTSTPDNAQCMSHDATTMAV--RDEDATRTISMLGGTADLLKFSRLLLLLSEAIAVSASV 454
            S+P SERLCKVLPKVM+TAI+GV+DLDEQVFEQMM+                                     VVARDGGGEFFAQSPAPGRPASFFRL GEP+TP R   +++  T S   ++     S  ++T   +M    K    A          P       TP R    GGA  G   G G+W A  FTP             RG L     R   P +R          TP+ P                           SYLIRS+S++HGE    SP K + SPGG +  V EG + D+R  TKELLDLK+RYM +TQHWLKTDIVN EELRMIRAQVFEAIQRKRSELH EAAAVLRAE   S  +++  ++    +NS                                 +TS  D                 +E+A RTI+ML GTA+ LKFSRLLLLLSEAI+VS SV
Sbjct:  427 SIPHSERLCKVLPKVMETAIRGVKDLDEQVFEQMMRTASERGSGMAMSMSSLSSPAHGGSLPLGTPARRLSSCVVARDGGGEFFAQSPAPGRPASFFRLVGEPKTPARGDGSALRRTSSGSSIKVVRTASAWDATPMIKMFTGGKPGKKAXXXXXXXXATPHKNARE-TPLRTPRSGGA--GGFFGAGDWLAAAFTP-------------RGALAPDPDR--APPRRFFG-------TPSLP---------------------------SYLIRSKSKKHGESREASPIKSLFSPGGTERKVEEGGEEDVRHLTKELLDLKSRYMASTQHWLKTDIVNHEELRMIRAQVFEAIQRKRSELHTEAAAVLRAE---SRLEESLRIQHSGGSNSKSSRGCXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSGKDEXXXXXXXXXXXXXLREEEEANRTIAMLAGTAEFLKFSRLLLLLSEAISVSNSV 855          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4925.12102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JG15_9PHAE3.190e-8345.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4K0_ECTSI1.090e-6241.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4925contigH-paniculata_contig4925:6055..14479 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4925.12102.1mRNA_H-paniculata_contig4925.12102.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4925 4302..14485 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4925.12102.1 ID=prot_H-paniculata_contig4925.12102.1|Name=mRNA_H-paniculata_contig4925.12102.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=588bp
MRRDSGSGGTSSVPRSERLCKVLPKVMDTAIKGVRDLDEQVFEQMMQAAA
ERMPPPPPPPPPGTPARRLSSCVVARDGGGEFFAQSPAPGRPASFFRLGE
PQTPRRTSVVATGSTGFVRGSPPESTRDRRMNARAKQTPPAPLVTAIPAT
GPSTIKNPGTPGRGRGIGGAAAGAVMGVGEWWANTFTPTGNRYVIVAERI
FRGILDLSIVRMVVPRKRTNSDQGAASTTPAAPAQAAERQDILSFEGSAE
EVLRYTIVAKSYLIRSRSRRHGEGTPSPSKLIKSPGGIDTVVSEGDDNDM
RAATKELLDLKTRYMTATQHWLKTDIVNDEELRMIRAQVFEAIQRKRSEL
HREAAAVLRAERVASEAQQATALKSRPNNNSADDGDMSGGGVAASPNTST
PDNAQCMSHDATTMAVRDEDATRTISMLGGTADLLKFSRLLLLLSEAIAV
SASVSYSSAAGSASGLVAGNSSSGTTPKILPETIPETTPALKSGKKDEGP
LDASKKLTPPRRMGSGTIQGTALTTPEKTLTRTGSGPILGSTPQQGMWRS
FTRSASSGGGPMPGIPKSSKALTPLRPTCRPIDVSPE*
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