prot_H-paniculata_contig4910.12078.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4910.12078.1
Unique Nameprot_H-paniculata_contig4910.12078.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length817
Homology
BLAST of mRNA_H-paniculata_contig4910.12078.1 vs. uniprot
Match: D8LBB5_ECTSI (Essential abundant protein involved in regulation of transcription n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBB5_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 8.680e-55
Identity = 241/693 (34.78%), Postives = 321/693 (46.32%), Query Frame = 0
Query:  193 AREIVLWEAIRRAESKWAWEREMAFLLLEACGGNTDVDNGDPG---GISEDGDGY-SEAEQAAREAVDRALSGTEGADIRDGSGDGNGGGNVFRELESVDEAMRAACRGVMYFMLQESTHKSTSHAYE-----------------------------------------GENTS-GTSRARTRXXXXXXXXXXSGSSPPASDASVAFPLPALSSGLERAFRILAAAFGETIIPLDRDAHPEEKTSVWTGRIAHFQGRMQEQQRVLATRTAAAAASAYVATRPLPKKLNPVLRPLMSAVKVEPDAERRAVSTARLACLAATLLSD---NDRRGAGNKVLTNLAVLAKPQPRSSVEEERDKGLGSSGRA------GDDGPAEALRHAIQLAATTGRAAANTV--------------AASSGTCEV-----RNEA--RVVSGAVATEVGKHAGTRTVAYFSDIGDWVRQALAPLLVLAAPTRPADRDEAGGDANEKDQKGSATGEPSPPLLASGLNVSGIHTVPTIPTAAVVAEVTPRGSRDLWAALAVANALVQASRHSVSAATAXXXXXGGNSPSMSLLSAFLLETPMASGLLALSRR---PVTHS-----VTAAAT-----------STADGDNIADSGGV----GGDSSSLIDLSSDAAVAVIKEAAGLCPEGVWAGLRADVLPALT-GSCS 785
            ARE+ + E  RRA S WAWE+E+AF L+EAC                 S  GD   S+AEQ A  AVDRAL+  + A           G  VF+ELE VD+A+ AAC GV+  +LQ                                                     G++ S GT++A T           S S+ P    +   PL   +S +ER F+ LAAAFGET++P+DR A  EE+ +VWTGR+ HF  R+Q QQ VL  R  +AAAS Y   RPLP +LNPVLRPL+SAVK EPDA+RR +S +RLA LA  LL D   ++RR AG  VL  LA L+    + S+         ++           DG  E LRHA+ LA+++  A    V              A  S   +V     R E    VV G    E G+  G R       + DW  + LAPLL       P+     GG  N      +A   P   L A+    S              AE+    + DL AAL VA AL+QA+R   +AA A      G  P   LL + LLET +A+GLLAL+R    PV+       ++A  T           S  D  N  D G      GG ++++   ++DAA+ + ++AA L P+G+W GLR+D+LPAL  G+CS
Sbjct:  872 ARELAMSEVARRAGSGWAWEQELAFFLMEACXXXXXXXXXXXXXXXSTSTRGDEVPSKAEQDAWAAVDRALATKDDAAAV--------GHKVFKELEGVDKAVSAACSGVIRVLLQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPKGGKSRSQGTAKAAT----VRGSSARSRSTAPVPPTATPAPLQGAAS-VERTFQSLAAAFGETLVPVDRGATREEREAVWTGRVRHFHARIQAQQAVLTRRITSAAASVYAGVRPLPPELNPVLRPLVSAVKKEPDAQRRGLSASRLARLATALLGDAVRSERRDAGAMVLFGLASLSGKGQQQSLNSPATAAAAATEETLMAVEVACDGATEMLRHAVSLASSSSAAPTAPVPPPVSPASAARPLPAPGSSRSDVGSGGGRGEGIEEVVKGG-GREGGRRRGGRGG---KAVRDWALRTLAPLL-----RHPSGMGAQGG--NTIGAGTTALPWPQRKLSAAEKKKSA-------------AEIR---AIDLSAALGVAEALLQAARDRTAAAAAAANPHRGARP---LLGSLLLETSLAAGLLALARSGRVPVSGEDEGADISAEPTRGGIPLRQHHRSGGDAGNAPDGGTPSVDGGGHAAAVAAATADAALIIARDAADLFPDGLWEGLRSDLLPALAAGACS 1521          
BLAST of mRNA_H-paniculata_contig4910.12078.1 vs. uniprot
Match: A0A6H5J4R7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4R7_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 2.110e-34
Identity = 164/478 (34.31%), Postives = 218/478 (45.61%), Query Frame = 0
Query:  360 SGLERAFRILAAAFGETIIPLDRDAHPEEKTSVWTGRIAHFQGRMQEQQRVLATRTAAAAASAYVATRPLPKKLNPVLRPLMSAVKVEPDAERRAVSTARLACLAATLLSD---NDRRGAGNKVLTNLAVLAKPQPRSSVEEERDKGLGSSGRA------GDDGPAEALRHAIQLAATTGRAAANTVAASSGTCEVRNEARVVSGAVATEV----------------GKHAGTRTVAYFSD-IGDWVRQALAPLLVLAAPTRPADRDEAGGDANEKDQKGSATGEPSPPLLASGLNVSG--IHTVPTIPTAAVVAEVTPRGSRDLWAALAVANALVQASR-HSVSAATAXXXXXGGNSPSMSLLSAFLLETPMASGLLALSRR--PVTHSVTAAATSTADG-------DNIADSGGVG----GDSSSL---------IDLSSDAAVAVIKEAAGLCPEGVWAGLRADVLPALT-GSCS 785
            + +ER F+ LAAAFGET++P+DR A  EE+ +VWTGR+ HF  R+Q QQ VL  R  +AAAS Y    PLP +LNPVLRPL+SAVK EPDA+RR +S +RLA LA  LL D   ++RR AG  VL  LA L+    + S+         ++           DG  E LRHA+ LA ++       V                                        G+             + DW  Q LAPLL       P+     GG  N      +A   P   L A+    S   I  +                  DL AAL VA AL+QA+R  + +AA A      G  P   LL + LLET +A+GLLAL+R   PV+     A  S            +    GG G    G + S+             +DAA+ + ++AA L P+G+W GLR+D+LPAL  G+CS
Sbjct:  201 ASVERTFQSLAAAFGETLVPVDRAATREEREAVWTGRVRHFHARIQAQQAVLMRRVTSAAASVYAGVLPLPPELNPVLRPLVSAVKKEPDAQRRGLSASRLARLATALLGDAARSERRDAGAMVLFGLASLSGKGQQQSLNSPSTAAAAATEETLMAVEVACDGATEMLRHAVSLAPSSSAVPTAPVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGREGXXXXXXXXXKAVRDWALQTLAPLL-----RHPSGMGTQGG--NTIGAGTAALPRPQRKLSAAEKKKSADEIRAI------------------DLSAALGVAEALLQAARDRTAAAAAAAANPDRGERP---LLGSLLLETSLAAGLLALARSGVPVSGEDEGADISAEPSHRRTRLRQHRRSGGGAGNAHDGGTPSVDGXXXXXXXXXXXADAALIIARDAAALFPDGLWEGLRSDLLPALAAGACS 650          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4910.12078.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBB5_ECTSI8.680e-5534.78Essential abundant protein involved in regulation ... [more]
A0A6H5J4R7_9PHAE2.110e-3434.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022707Domain of unknown function DUF3535PFAMPF12054DUF3535coord: 402..486
e-value: 4.0E-15
score: 56.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4910contigH-paniculata_contig4910:6617..11431 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4910.12078.1mRNA_H-paniculata_contig4910.12078.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4910 6616..11431 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4910.12078.1 ID=prot_H-paniculata_contig4910.12078.1|Name=mRNA_H-paniculata_contig4910.12078.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=817bp
SNRDSALAPPAPGLPAGGGTNDCGDMGAMVEADDWHHSGGSNSICRSADA
YSDMDVAATGDRHEDRVAGGGAALAARPGAQAGTKVVRGETEEPPPGNAE
DSVSDTKFSARVAAARALAELVRVAISLSTPSSPRTGDSGKTSLKRAGAD
DVDDVVGRPESSGNESSVGLKCPPGSSLTVTSCVKGVEEAVGAREIVLWE
AIRRAESKWAWEREMAFLLLEACGGNTDVDNGDPGGISEDGDGYSEAEQA
AREAVDRALSGTEGADIRDGSGDGNGGGNVFRELESVDEAMRAACRGVMY
FMLQESTHKSTSHAYEGENTSGTSRARTRGGTKQAQTRGSGSSPPASDAS
VAFPLPALSSGLERAFRILAAAFGETIIPLDRDAHPEEKTSVWTGRIAHF
QGRMQEQQRVLATRTAAAAASAYVATRPLPKKLNPVLRPLMSAVKVEPDA
ERRAVSTARLACLAATLLSDNDRRGAGNKVLTNLAVLAKPQPRSSVEEER
DKGLGSSGRAGDDGPAEALRHAIQLAATTGRAAANTVAASSGTCEVRNEA
RVVSGAVATEVGKHAGTRTVAYFSDIGDWVRQALAPLLVLAAPTRPADRD
EAGGDANEKDQKGSATGEPSPPLLASGLNVSGIHTVPTIPTAAVVAEVTP
RGSRDLWAALAVANALVQASRHSVSAATAAAAAAGGNSPSMSLLSAFLLE
TPMASGLLALSRRPVTHSVTAAATSTADGDNIADSGGVGGDSSSLIDLSS
DAAVAVIKEAAGLCPEGVWAGLRADVLPALTGSCSFIVPSNAIVDMMDAG
SGDHDVARNSVLRKQEW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022707DUF3535