mRNA_H-paniculata_contig4906.12071.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4906.12071.1 vs. uniprot
Match: D7FGX3_ECTSI (Lipoyl-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGX3_ECTSI) HSP 1 Score: 126 bits (316), Expect = 5.330e-33 Identity = 62/93 (66.67%), Postives = 77/93 (82.80%), Query Frame = 1
Query: 1 KEPRHSHVLMPNITD-EDFAALTSWSVSVGDSVKVGDVVCEIELEQFSVGVKVETSGYIAKILVKAGGEKIPVGASLATVVHSEEDIAVYLQA 276
+EPRH+H+ MP IT+ E A LTSW V VGD ++VGDVVCEIELEQFSVGVKVET G++A+ILV+AG E +PVG + T+VHSEE+IA+Y QA
Sbjct: 177 EEPRHAHIEMPTITEAERVATLTSWKVQVGDVIEVGDVVCEIELEQFSVGVKVETPGFLAEILVEAGTEGVPVGTDIGTIVHSEEEIALYQQA 269
BLAST of mRNA_H-paniculata_contig4906.12071.1 vs. uniprot
Match: A0A4D9CXA7_9STRA (Lipoyl-binding domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXA7_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 1.250e-14 Identity = 36/84 (42.86%), Postives = 56/84 (66.67%), Query Frame = 1
Query: 4 EPRHSHVLMPNITDEDFAA-LTSWSVSVGDSVKVGDVVCEIELEQFSVGVKVETSGYIAKILVKAGGEKIPVGASLATVVHSEE 252
+P H +++P+I LT W + GD +K GDVVCE+E++QF+VG++V+ GY+A+ILV AG +P G +LA V+ E+
Sbjct: 73 DPPHFKLILPDIGQTSKTGNLTRWRKAEGDVIKNGDVVCEVEMDQFNVGMEVDDKGYLARILVPAGTRGVPAGEALAVFVYEEQ 156
BLAST of mRNA_H-paniculata_contig4906.12071.1 vs. uniprot
Match: A0A2R5G449_9STRA (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G449_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 5.220e-10 Identity = 32/88 (36.36%), Postives = 52/88 (59.09%), Query Frame = 1
Query: 7 PRHSHVLMPNITDE-DFAALTSWSVSVGDSVKVGDVVCEIELEQFSVGVKVETSGYIAKILVKAGGEKIPVGASLATVVHSEEDIAVY 267
P H+ + +P ++ + SW GD V+ G VCEIE ++ +V +V+ GY+A+ILV+AGG PVG + +V +ED+A +
Sbjct: 55 PSHTKLTLPALSPTMSEGVIASWLRKEGDFVEAGQPVCEIETDKATVDFEVQDDGYLARILVEAGGPAQPVGEVIGVLVEDKEDVAAF 142
BLAST of mRNA_H-paniculata_contig4906.12071.1 vs. uniprot
Match: A0A4P9ZGI4_9ASCO (Acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Metschnikowia bicuspidata TaxID=27322 RepID=A0A4P9ZGI4_9ASCO) HSP 1 Score: 63.2 bits (152), Expect = 1.320e-9 Identity = 29/90 (32.22%), Postives = 53/90 (58.89%), Query Frame = 1
Query: 1 KEPRHSHVLMPNITDEDFAA-LTSWSVSVGDSVKVGDVVCEIELEQFSVGVKVETSGYIAKILVKAGGEKIPVGASLATVVHSEEDIAVY 267
K P H+ + MP ++ + SWS SVGD + G+ + E+E ++ ++ + + GY+AKIL+ AG + +PVG +A V +D++ +
Sbjct: 34 KFPSHTVIKMPALSPTMTQGNIASWSKSVGDELSPGEAIAEVETDKATMDFEFQEEGYLAKILIDAGAQDVPVGKPIAVYVEDADDVSAF 123
BLAST of mRNA_H-paniculata_contig4906.12071.1 vs. uniprot
Match: A0A2H0ZGE3_CANAR (Acetyltransferase component of pyruvate dehydrogenase complex n=6 Tax=Candida auris TaxID=498019 RepID=A0A2H0ZGE3_CANAR) HSP 1 Score: 62.8 bits (151), Expect = 1.810e-9 Identity = 31/90 (34.44%), Postives = 53/90 (58.89%), Query Frame = 1
Query: 1 KEPRHSHVLMPNITDE-DFAALTSWSVSVGDSVKVGDVVCEIELEQFSVGVKVETSGYIAKILVKAGGEKIPVGASLATVVHSEEDIAVY 267
K P H+ + MP ++ + SWS +VGD + G+ + EIE ++ S+ + + GY+AKILV+AG + +PVG +A V +D+ +
Sbjct: 47 KFPDHTVIHMPALSPTMTQGGIMSWSKNVGDQLSPGEPIAEIETDKASMDFEFQEEGYLAKILVEAGAQDVPVGKPIAVYVEEADDVPAF 136
BLAST of mRNA_H-paniculata_contig4906.12071.1 vs. uniprot
Match: UPI0014023C64 (dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial n=1 Tax=Amblyraja radiata TaxID=386614 RepID=UPI0014023C64) HSP 1 Score: 62.8 bits (151), Expect = 1.850e-9 Identity = 29/88 (32.95%), Postives = 49/88 (55.68%), Query Frame = 1
Query: 7 PRHSHVLMPNITDE-DFAALTSWSVSVGDSVKVGDVVCEIELEQFSVGVKVETSGYIAKILVKAGGEKIPVGASLATVVHSEEDIAVY 267
P H + +P ++ + W VG+ ++ GD++ EIE ++ ++G +V GY+AKILV G IP+G +L +V E DI +
Sbjct: 205 PSHMKIALPALSPTMTVGTIQRWEKKVGEKLREGDLIAEIETDKATIGFEVMEEGYLAKILVAEGSRDIPLGTTLCIIVEKESDIPAF 292
BLAST of mRNA_H-paniculata_contig4906.12071.1 vs. uniprot
Match: UPI001B7F5E08 (dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial n=1 Tax=Carcharodon carcharias TaxID=13397 RepID=UPI001B7F5E08) HSP 1 Score: 62.8 bits (151), Expect = 1.850e-9 Identity = 28/88 (31.82%), Postives = 50/88 (56.82%), Query Frame = 1
Query: 7 PRHSHVLMPNITDE-DFAALTSWSVSVGDSVKVGDVVCEIELEQFSVGVKVETSGYIAKILVKAGGEKIPVGASLATVVHSEEDIAVY 267
P H +++P ++ + W VG+ ++ GD++ EIE ++ ++G +V GY+AKIL+ G +P+G SL +V E DI +
Sbjct: 215 PSHMKIVLPALSPTMTVGTVQRWEKKVGEKLREGDLIAEIETDKATIGFEVMEEGYLAKILIAEGTRDVPLGTSLCIIVEKESDIPAF 302
BLAST of mRNA_H-paniculata_contig4906.12071.1 vs. uniprot
Match: A0A401PCJ6_SCYTO (Acetyltransferase component of pyruvate dehydrogenase complex (Fragment) n=2 Tax=Scyliorhinus TaxID=7829 RepID=A0A401PCJ6_SCYTO) HSP 1 Score: 62.4 bits (150), Expect = 2.530e-9 Identity = 28/88 (31.82%), Postives = 50/88 (56.82%), Query Frame = 1
Query: 7 PRHSHVLMPNITDE-DFAALTSWSVSVGDSVKVGDVVCEIELEQFSVGVKVETSGYIAKILVKAGGEKIPVGASLATVVHSEEDIAVY 267
P H +++P ++ + W VG+ ++ GD++ EIE ++ ++G +V GY+AKIL+ G +P+G SL +V E DI +
Sbjct: 233 PPHMKIVLPALSPTMTVGTVQRWEKKVGEKLREGDLIAEIETDKATIGFEVMEEGYLAKILIAEGTRDVPLGTSLCIIVEKESDIPAF 320
BLAST of mRNA_H-paniculata_contig4906.12071.1 vs. uniprot
Match: A0A512U655_9ASCO (Acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Metschnikowia sp. JCM 33374 TaxID=2562755 RepID=A0A512U655_9ASCO) HSP 1 Score: 62.0 bits (149), Expect = 3.370e-9 Identity = 32/88 (36.36%), Postives = 50/88 (56.82%), Query Frame = 1
Query: 7 PRHSHVLMPNITDE-DFAALTSWSVSVGDSVKVGDVVCEIELEQFSVGVKVETSGYIAKILVKAGGEKIPVGASLATVVHSEEDIAVY 267
P H + MP ++ + SWS SVGD + G+ + EIE ++ S+ + + GY+AKILV AG + IPVG +A V + D+ +
Sbjct: 43 PSHVVIKMPALSPTMTQGGIASWSKSVGDELAPGEPIAEIETDKASMDFEFQEEGYLAKILVDAGAQDIPVGQPIAVYVEDKGDVGAF 130
BLAST of mRNA_H-paniculata_contig4906.12071.1 vs. uniprot
Match: A0A2P7YM67_9ASCO (Acetyltransferase component of pyruvate dehydrogenase complex n=3 Tax=Metschnikowiaceae incertae sedis TaxID=2937349 RepID=A0A2P7YM67_9ASCO) HSP 1 Score: 62.0 bits (149), Expect = 3.370e-9 Identity = 32/90 (35.56%), Postives = 51/90 (56.67%), Query Frame = 1
Query: 1 KEPRHSHVLMPNITDE-DFAALTSWSVSVGDSVKVGDVVCEIELEQFSVGVKVETSGYIAKILVKAGGEKIPVGASLATVVHSEEDIAVY 267
K P H+ + MP ++ + SWS VGD + G+ + EIE ++ S+ + + GY+AKILV AG + +PVG +A V D+A +
Sbjct: 45 KFPDHTVIHMPALSPTMTQGGIMSWSKQVGDELAPGEPIAEIETDKASMDFEFQEEGYLAKILVDAGAQDVPVGKPIAVYVEESGDVAAF 134 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4906.12071.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4906.12071.1 >prot_H-paniculata_contig4906.12071.1 ID=prot_H-paniculata_contig4906.12071.1|Name=mRNA_H-paniculata_contig4906.12071.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=83bp MPNITDEDFAALTSWSVSVGDSVKVGDVVCEIELEQFSVGVKVETSGYIAback to top mRNA from alignment at H-paniculata_contig4906:13334..14664+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4906.12071.1 ID=mRNA_H-paniculata_contig4906.12071.1|Name=mRNA_H-paniculata_contig4906.12071.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1331bp|location=Sequence derived from alignment at H-paniculata_contig4906:13334..14664+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4906:13334..14664+ >mRNA_H-paniculata_contig4906.12071.1 ID=mRNA_H-paniculata_contig4906.12071.1|Name=mRNA_H-paniculata_contig4906.12071.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=498bp|location=Sequence derived from alignment at H-paniculata_contig4906:13334..14664+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |