prot_H-paniculata_contig4904.12067.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4904.12067.1
Unique Nameprot_H-paniculata_contig4904.12067.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length232
Homology
BLAST of mRNA_H-paniculata_contig4904.12067.1 vs. uniprot
Match: A0A6H5L1H4_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1H4_9PHAE)

HSP 1 Score: 192 bits (488), Expect = 1.030e-57
Identity = 95/215 (44.19%), Postives = 137/215 (63.72%), Query Frame = 0
Query:   17 GASLMALLLRLNDVRGATVTEPSIPLEGGKGSDVVVITRENFSSTLKEGLWFVKFYTRWCSHCNKMQPAWEELATDLKGKINVGQVDCDVEMSICNRFHVKGYPTLVHVGNRKARQYQESKIKDARSKAALYEFAVRGYRQTKTYNVLKSPFGPVESVKAAVVDLSVKAQYHFLDQLERGTSMGVLCLGVIAMLVVGTSVVSLFLLLVSGKPKHE 231
            G+ ++A  +    V G               SD++ +T ENF  T+KEG WFVKFYT WC HC ++QP WEELAT+LKGK+NVGQV+CD + S+C RFHV GYPTLVHV NR++R Y++S     R K AL  FA+ GY++    + LKSPFGP+E+ KA +   +++A+   +  +E+GT M ++CL  +A+L     VV+  L+ +  +PK +
Sbjct:   44 GSIVVAAAVATAGVAGXXXXXXXXXXXXAPASDIITVTSENFKETIKEGTWFVKFYTDWCPHCQRLQPTWEELATELKGKVNVGQVNCDRDYSLCRRFHVTGYPTLVHVHNRRSRVYKKS-----RGKEALVAFALNGYKKQVAVSALKSPFGPLENFKALIAREALRAKKFVVSTIEKGTPMWMVCLCAVAVLXXXXXVVASVLVSIK-RPKED 252          
BLAST of mRNA_H-paniculata_contig4904.12067.1 vs. uniprot
Match: A0A7S2WDG4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDG4_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.970e-24
Identity = 66/184 (35.87%), Postives = 96/184 (52.17%), Query Frame = 0
Query:   48 SDVVVITRENF------SSTLKEGLWFVKFYTRWCSHCNKMQPAWEELATDLKGKINVGQVDCDVEMSICNRFHVKGYPTLVHVGNRKARQYQESKIKDARSKAALYEFAVRGYRQTKTYNVLKSPFGPVESVKAAVVDLSVKAQYHFLDQLERGTSMGVLCLGVIAMLVVGTSVVSLFLLLVS 225
            SDVVV+T +NF      S+    G WFVKFY  WC HC K+ P W+ELAT+LKG +NV +VD +   S+  RF ++GYPTL+     K  +Y+E      RS  +L  FA  GY+       + +P   + ++K     L +K   H+    E  +      L   A +V+G+ + S F L +S
Sbjct:   28 SDVVVLTSQNFEHDTQASTGATTGDWFVKFYAPWCGHCKKLAPVWDELATELKGVVNVAKVDAEAHSSLRKRFRIRGYPTLIFFSQGKMYKYEEK-----RSLESLVAFAKGGYKDDTEAVDVPAPPDLIATLKGEFFGL-LKTVLHYSKHPEAISQESAYFLA--AGIVIGSVLASAFYLFLS 203          
BLAST of mRNA_H-paniculata_contig4904.12067.1 vs. uniprot
Match: A0A0G4FAB9_VITBC (Thioredoxin domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FAB9_VITBC)

HSP 1 Score: 104 bits (259), Expect = 6.800e-24
Identity = 63/165 (38.18%), Postives = 92/165 (55.76%), Query Frame = 0
Query:   48 SDVVVITRENF------SSTLKEGLWFVKFYTRWCSHCNKMQPAWEELATDLKGKINVGQVDCDVEMSICNRFHVKGYPTLVHVGNRKARQYQESKIKDARSKAALYEFAVRGYRQTKTYNVLKSPFGPVESV-----KAAVVDLSVKAQYHFLDQLERGTSMGV 201
            S V V+T  NF      SS    G WF++FY  WC HC ++QP WEELA +LKG++ V +VDCD   S  +RF+++G+PTL+ +  R+ R Y+    K AR  AAL  FA  GY++T        P  P ES+     K A++ L +  ++     +  G ++GV
Sbjct:   28 SAVRVLTDANFEHDTQASSGATTGDWFIEFYANWCGHCQRLQPTWEELAANLKGRVVVAKVDCDANTSTRSRFNIQGFPTLLLL--RQGRMYE---YKGARDLAALEAFATGGYKKTPG-----KPVPPPESLLDQLKKEAMLLLDMSMRFAKEHPVHVGVAVGV 182          
BLAST of mRNA_H-paniculata_contig4904.12067.1 vs. uniprot
Match: UPI000644C2D5 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644C2D5)

HSP 1 Score: 105 bits (263), Expect = 1.480e-23
Identity = 49/128 (38.28%), Postives = 76/128 (59.38%), Query Frame = 0
Query:   48 SDVVVITRENFSSTLKEG-LWFVKFYTRWCSHCNKMQPAWEELATDLKGKINVGQVDCDVEMSICNRFHVKGYPTLVHVGNRKARQYQESKIKDARSKAALYEFAVRGYRQTKTYNVLKSPFGPVESV 174
            SDV+V+T +NF   +K G  W ++FY  WCS C K+ P +EELAT +KG +N+ ++DC VE S C R+ + GYPTL  V +    ++Q       R+  AL ++ + GY+ +KT  V +     V+ +
Sbjct:   34 SDVIVLTDKNFDQNVKSGGSWLIEFYAPWCSFCKKLAPIYEELATKVKGNVNIAKIDCTVERSTCQRYEIMGYPTLKFVSSGVVYEHQGE-----RTLEALEQYVLEGYKSSKTVQVAEDSLSGVKDL 156          
BLAST of mRNA_H-paniculata_contig4904.12067.1 vs. uniprot
Match: A0A397TPC9_9GLOM (Thioredoxin-like protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TPC9_9GLOM)

HSP 1 Score: 102 bits (255), Expect = 1.530e-21
Identity = 39/83 (46.99%), Postives = 57/83 (68.67%), Query Frame = 0
Query:   40 IPLEGGKGSDVVVITRENFSSTLKEGLWFVKFYTRWCSHCNKMQPAWEELATDLKGKINVGQVDCDVEMSICNRFHVKGYPTL 122
            +P++      VV++   NF    K G+WFVKF+  WC+HC K+ P WEEL  +L+ K+NVG+VDC ++  +C RF+V+GYPTL
Sbjct:  158 VPVQSNPLGTVVLLNASNFDQLTKTGIWFVKFFAPWCTHCQKLAPVWEELGHELQYKVNVGKVDCTIDTGLCQRFNVQGYPTL 240          
BLAST of mRNA_H-paniculata_contig4904.12067.1 vs. uniprot
Match: A0A0G4J6I7_PLABS (Thioredoxin domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J6I7_PLABS)

HSP 1 Score: 97.1 bits (240), Expect = 3.350e-21
Identity = 49/135 (36.30%), Postives = 70/135 (51.85%), Query Frame = 0
Query:   39 SIPLEGGKGSDVVVITRENFSSTLKE------GLWFVKFYTRWCSHCNKMQPAWEELATDLKGKINVGQVDCDVEMSICNRFHVKGYPTLVHVGNRKARQYQESKIKDARSKAALYEFAVRGYRQTKTYNVLKSP 167
            ++ +   K SDVV +T   F    +       G WFV+FY  WC HC  +   WEELAT LK  +NV +VDC    ++C RF+V+GYPT++     K  ++Q  +  D      L +FA  GY + K     K+P
Sbjct:   13 TVAMGADKTSDVVTLTESTFEKETQAATGSTTGDWFVEFYAPWCGHCKSLAQTWEELATKLKDDVNVAKVDCTSNSNLCQRFNVRGYPTVLLFSKGKQYKFQSKRTLDE-----LEKFARGGYLEAKAETTPKAP 142          
BLAST of mRNA_H-paniculata_contig4904.12067.1 vs. uniprot
Match: A0A015KIY8_RHIIW (Protein disulfide isomerase EPS1 n=11 Tax=Rhizophagus TaxID=1129544 RepID=A0A015KIY8_RHIIW)

HSP 1 Score: 99.8 bits (247), Expect = 1.840e-20
Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 0
Query:   41 PLEGGKGSDVVVITRENFSSTLKEGLWFVKFYTRWCSHCNKMQPAWEELATDLKGKINVGQVDCDVEMSICNRFHVKGYPTL 122
            P +      VV++   NF S  K G+WF+KF+  WC+HC K+ P WEEL  +L+ K+N+G+VDC  +  +C RF V+GYPTL
Sbjct:  166 PAQANPLGTVVLLNASNFDSLTKTGIWFIKFFAPWCTHCQKLAPTWEELGHELQYKVNIGKVDCTADSGLCQRFKVQGYPTL 247          
BLAST of mRNA_H-paniculata_contig4904.12067.1 vs. uniprot
Match: A0A1D3CXF5_9EIME (Putative thioredoxin n=1 Tax=Cyclospora cayetanensis TaxID=88456 RepID=A0A1D3CXF5_9EIME)

HSP 1 Score: 95.5 bits (236), Expect = 2.520e-20
Identity = 61/149 (40.94%), Postives = 74/149 (49.66%), Query Frame = 0
Query:   49 DVVVITRENFSSTLK------EGLWFVKFYTRWCSHCNKMQPAWEELATDLKGKINVGQVDCDVEMSICNRFHVKGYPTLVHVGNRKARQYQESKIKDARSKAALYEFAVRGYRQTKTYNVLKSPFGPVESVKAAVVDLSVKAQYHFLD 191
            DV V+T  NF    +       G WFVKFY  WCSHC  M PAWEELA+ LKG+INV  +D         RF +KG+PTL+ +   K  Q  E K K  RS  ALY FA  G+R+         P  PV S    +    + A Y   D
Sbjct:   49 DVQVLTDANFERETQAVTGSTSGDWFVKFYAPWCSHCRSMTPAWEELASMLKGQINVADLDATANAHTATRFGIKGFPTLLFL---KDGQMYEHKGK--RSVDALYAFATGGWREATP-----QPIPPVMSFFDTMKGEILSAVYQLRD 187          
BLAST of mRNA_H-paniculata_contig4904.12067.1 vs. uniprot
Match: A0A812WAE0_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WAE0_SYMMI)

HSP 1 Score: 94.7 bits (234), Expect = 3.380e-20
Identity = 58/149 (38.93%), Postives = 78/149 (52.35%), Query Frame = 0
Query:   46 KGSDVVVITRENF------SSTLKEGLWFVKFYTRWCSHCNKMQPAWEELATDLKGKINVGQVDCDVEMSICNRFHVKGYPTLVHVGNRKARQYQESKIKDARSKAALYEFAVRGYRQTKTYNVLKSPFGPV--ESVKAAVVDLSVKAQ 186
            K S+VVV+T  NF      S+    G W V+FY  WC HC ++QP WEELAT+LKG  NVG+VD      + NRF +KG+PT+        RQ Q    K  RS  A   F   GY+   +   + +P  P   E+ K +V+   + AQ
Sbjct:   24 KASNVVVLTSANFEMETQASTGSTTGDWIVEFYAPWCGHCKRLQPVWEELATELKGIANVGKVDVTGNRDLGNRFDIKGFPTIKFF-----RQGQTYDYKGGRSLEAFVNFVKGGYKDAPS---VATPDQPTWFETTKKSVLTPFLAAQ 164          
BLAST of mRNA_H-paniculata_contig4904.12067.1 vs. uniprot
Match: A4UHA7_ALEFU (Protein disulfide-isomerase n=1 Tax=Alexandrium fundyense TaxID=2932 RepID=A4UHA7_ALEFU)

HSP 1 Score: 94.4 bits (233), Expect = 3.550e-20
Identity = 54/144 (37.50%), Postives = 77/144 (53.47%), Query Frame = 0
Query:   48 SDVVVITRENF------SSTLKEGLWFVKFYTRWCSHCNKMQPAWEELATDLKGKINVGQVDCDVEMSICNRFHVKGYPTLVHVGNRKARQYQESKIKDARSKAALYEFAVRGYRQTK----TYNVLKSPFGPVESVKAAVVDL 181
            SDVV +T +NF      +S    G WFVKFY  WC HC  + P WE++AT+LKG +NV +VD  V   +  RF +  YPTL+    +K  +Y   + KDA     L  +A  G+R  +    T +V K P    E+++  V D+
Sbjct:   24 SDVVELTDDNFEHDTQAASGATTGDWFVKFYAPWCGHCKSIAPIWEQVATELKGLVNVAKVDATVHQKLAKRFKIGSYPTLILFSQQKMYKYSGGRDKDA-----LISYASVGFRADEAGPDTSSVPKVPSLLDETLEPLVADV 162          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4904.12067.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L1H4_9PHAE1.030e-5744.19Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A7S2WDG4_9STRA1.970e-2435.87Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A0G4FAB9_VITBC6.800e-2438.18Thioredoxin domain-containing protein n=2 Tax=Vitr... [more]
UPI000644C2D51.480e-2338.28hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A397TPC9_9GLOM1.530e-2146.99Thioredoxin-like protein n=1 Tax=Glomus cerebrifor... [more]
A0A0G4J6I7_PLABS3.350e-2136.30Thioredoxin domain-containing protein n=1 Tax=Plas... [more]
A0A015KIY8_RHIIW1.840e-2046.34Protein disulfide isomerase EPS1 n=11 Tax=Rhizopha... [more]
A0A1D3CXF5_9EIME2.520e-2040.94Putative thioredoxin n=1 Tax=Cyclospora cayetanens... [more]
A0A812WAE0_SYMMI3.380e-2038.93Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
A4UHA7_ALEFU3.550e-2037.50Protein disulfide-isomerase n=1 Tax=Alexandrium fu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 50..149
e-value: 2.3E-22
score: 78.9
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 31..157
score: 11.721
NoneNo IPR availableGENE3D3.40.30.10coord: 38..181
e-value: 1.6E-31
score: 111.2
NoneNo IPR availablePANTHERPTHR45815FAMILY NOT NAMEDcoord: 19..158
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 199..224
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 225..231
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..198
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..32
score: 0.69
NoneNo IPR availableTMHMMTMhelixcoord: 202..224
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 47..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4904contigH-paniculata_contig4904:1610..11545 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4904.12067.1mRNA_H-paniculata_contig4904.12067.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4904 1442..11694 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4904.12067.1 ID=prot_H-paniculata_contig4904.12067.1|Name=mRNA_H-paniculata_contig4904.12067.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=232bp
MVACVWSKRHRLSRFFGASLMALLLRLNDVRGATVTEPSIPLEGGKGSDV
VVITRENFSSTLKEGLWFVKFYTRWCSHCNKMQPAWEELATDLKGKINVG
QVDCDVEMSICNRFHVKGYPTLVHVGNRKARQYQESKIKDARSKAALYEF
AVRGYRQTKTYNVLKSPFGPVESVKAAVVDLSVKAQYHFLDQLERGTSMG
VLCLGVIAMLVVGTSVVSLFLLLVSGKPKHE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf