mRNA_H-paniculata_contig4855.11980.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4855.11980.1 vs. uniprot
Match: D7FLL5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLL5_ECTSI) HSP 1 Score: 242 bits (617), Expect = 1.790e-76 Identity = 123/139 (88.49%), Postives = 134/139 (96.40%), Query Frame = 1
Query: 1 IKSGKVVVMLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKAKVTKRTKLKPFVKYVNVNHLMPTRYQVDMDLKKAVDETALKTSRPEVKKAIKKIFEDRYVNQKDVKSEKKATGVKYFFEKLRF 417
IKSGKVVV+LAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSK K+ KRTKLKPFVKYVNVNH+MPTRYQVD+DLKKAVDETA+K S +V+KA++KIFE+RY+NQKDVKSEKKATGVKYFFEKLRF
Sbjct: 24 IKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDETAIKASPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 162
BLAST of mRNA_H-paniculata_contig4855.11980.1 vs. uniprot
Match: A0A836CBN1_9STRA (60S ribosomal protein L27 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN1_9STRA) HSP 1 Score: 203 bits (516), Expect = 1.540e-61 Identity = 101/139 (72.66%), Postives = 121/139 (87.05%), Query Frame = 1
Query: 1 IKSGKVVVMLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKAKVTKRTKLKPFVKYVNVNHLMPTRYQVDMDLKKAVDETALKTSRPEVKKAIKKIFEDRYVNQKDVKSEKKATGVKYFFEKLRF 417
IK+GKVV+MLAGRYAGRKAIVVK +D GS +RKF HA+VAGIDRYPR+VTK+MSK KV KR+K KPFVK+VNVNHLMPTRY D++LK V+E+A K SRPEV+KA+KK+FE+RY+NQ +KSEKKA+G KYFF KL F
Sbjct: 4 IKAGKVVIMLAGRYAGRKAIVVKAYDSGSADRKFTHALVAGIDRYPRKVTKSMSKVKVAKRSKCKPFVKFVNVNHLMPTRYTADIELKTVVEESAFKASRPEVRKAVKKVFEERYLNQGQIKSEKKASGSKYFFAKLAF 142
BLAST of mRNA_H-paniculata_contig4855.11980.1 vs. uniprot
Match: A0A7S4SWS4_9DINO (60S ribosomal protein L27 (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SWS4_9DINO) HSP 1 Score: 190 bits (483), Expect = 1.440e-56 Identity = 93/133 (69.92%), Postives = 115/133 (86.47%), Query Frame = 1
Query: 1 IKSGKVVVMLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKAKVTKRTKLKPFVKYVNVNHLMPTRYQVDMDLKKAVDETALKTSRPEVKKAIKKIFEDRYVNQKDVKSEKKATGVKYF 399
IKSGKVVV+LAGRYAGRKA+VVK +D+GS +RKF HA+V GIDRYP++VTK M+K K+TKR+K+KPF+K +N+NHLMPTRY VDMDLKK VDE A K ++ E +K +KKIFEDRY+NQ KSEKKA+GV+YF
Sbjct: 11 IKSGKVVVVLAGRYAGRKAVVVKTYDDGSIDRKFSHAMVVGIDRYPKKVTKGMTKTKITKRSKMKPFLKCINLNHLMPTRYSVDMDLKKTVDEAAFKEAKKETRKTVKKIFEDRYLNQASGKSEKKASGVQYF 143
BLAST of mRNA_H-paniculata_contig4855.11980.1 vs. uniprot
Match: A0A397BII5_9STRA (Uncharacterized protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A397BII5_9STRA) HSP 1 Score: 189 bits (479), Expect = 8.750e-56 Identity = 96/141 (68.09%), Postives = 118/141 (83.69%), Query Frame = 1
Query: 1 IKSGKVVVMLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKAKVTKRTKLKPFVKYVNVNHLMPTRYQVDMDLKKAVDETALKT--SRPEVKKAIKKIFEDRYVNQKDVKSEKKATGVKYFFEKLRF 417
+K+GKVVV+L GRYAGRKAIVVK +DEG +RKFGHAIVAGIDRYPR++T++M K KVTKR+K+KPFVKYVN NH++PTRY D++LKK VD+ L T +R E +K IKK+FEDRY+NQ KSEKKA GV +FF+KLRF
Sbjct: 16 VKNGKVVVLLNGRYAGRKAIVVKTYDEGHGDRKFGHAIVAGIDRYPRKITRSMGKKKVTKRSKIKPFVKYVNYNHILPTRYVADIELKKVVDDEVLATPEARIESRKIIKKVFEDRYLNQGATKSEKKAAGVSFFFKKLRF 156
BLAST of mRNA_H-paniculata_contig4855.11980.1 vs. uniprot
Match: M4B173_HYAAE (Uncharacterized protein n=21 Tax=Oomycota TaxID=4762 RepID=M4B173_HYAAE) HSP 1 Score: 186 bits (473), Expect = 4.710e-55 Identity = 96/141 (68.09%), Postives = 118/141 (83.69%), Query Frame = 1
Query: 1 IKSGKVVVMLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKAKVTKRTKLKPFVKYVNVNHLMPTRYQVDMDLKKAVDETALKT--SRPEVKKAIKKIFEDRYVNQKDVKSEKKATGVKYFFEKLRF 417
+K+GKVVV+L GR+AGRKAIVVK FDEG +RKFGHAIVAGIDRYPR+VT++MSKAKV +R+K+KPFVKYVN NH+MPTRY D+DLKK +D+ L +R E +K IKK+FE+RY+NQ KSEKKA GV +FF+KLRF
Sbjct: 4 VKNGKVVVLLNGRFAGRKAIVVKTFDEGRGDRKFGHAIVAGIDRYPRKVTRSMSKAKVKQRSKVKPFVKYVNYNHIMPTRYVADIDLKKVLDDEVLGNPETRIESRKTIKKVFEERYLNQGSCKSEKKAAGVSFFFKKLRF 144
BLAST of mRNA_H-paniculata_contig4855.11980.1 vs. uniprot
Match: A0A1V9Z0C3_9STRA (60S ribosomal protein L27 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9Z0C3_9STRA) HSP 1 Score: 185 bits (469), Expect = 2.270e-54 Identity = 94/141 (66.67%), Postives = 116/141 (82.27%), Query Frame = 1
Query: 1 IKSGKVVVMLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKAKVTKRTKLKPFVKYVNVNHLMPTRYQVDMDLKKAVDETALKTS--RPEVKKAIKKIFEDRYVNQKDVKSEKKATGVKYFFEKLRF 417
+K+GKVVV+L GRYAGRKAIVVK +DEG+ +RKFGHAIVAGIDRYPR++T++M K KV KR+K+KPFVK +N NH+MPTRY D+DLKK +DE L + R E +K IKK+FEDRY+NQ KSEKKA GV +FF+KLRF
Sbjct: 10 VKNGKVVVVLNGRYAGRKAIVVKAYDEGNGDRKFGHAIVAGIDRYPRKITRSMGKKKVAKRSKIKPFVKAINYNHIMPTRYVADIDLKKVLDEEVLSKAEARVESRKTIKKVFEDRYLNQAACKSEKKAAGVSFFFKKLRF 150
BLAST of mRNA_H-paniculata_contig4855.11980.1 vs. uniprot
Match: A0A0W8DKH9_PHYNI (Platelet-activating factor acetylhydrolase IB subunit alpha n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8DKH9_PHYNI) HSP 1 Score: 186 bits (471), Expect = 2.310e-54 Identity = 96/141 (68.09%), Postives = 116/141 (82.27%), Query Frame = 1
Query: 1 IKSGKVVVMLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKAKVTKRTKLKPFVKYVNVNHLMPTRYQVDMDLKKAVDETALKT--SRPEVKKAIKKIFEDRYVNQKDVKSEKKATGVKYFFEKLRF 417
+K+GKVVV+L GR+AGRKAIVVK FDEG +RKFGHAIVAGIDRYPR+VT+AM K K+ KR+K+KPFVKYVN NH+MPTRY D+DLKK +D+ L SR E +K IKK+FE+RY+NQ KSEKKA GV +FF+KLRF
Sbjct: 32 VKNGKVVVLLNGRFAGRKAIVVKTFDEGKGDRKFGHAIVAGIDRYPRKVTRAMGKNKLKKRSKVKPFVKYVNYNHIMPTRYVADIDLKKVLDDEVLANPESRIESRKTIKKVFEERYLNQAACKSEKKAAGVSFFFKKLRF 172
BLAST of mRNA_H-paniculata_contig4855.11980.1 vs. uniprot
Match: A0A812X5C3_SYMMI (60S ribosomal protein L27 (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812X5C3_SYMMI) HSP 1 Score: 183 bits (465), Expect = 6.350e-54 Identity = 95/140 (67.86%), Postives = 116/140 (82.86%), Query Frame = 1
Query: 1 IKSGKVVVMLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKAKVTKRTKLKPFVKYVNVNHLMPTRYQVDMDLKKAVDETALKT-SRPEVKKAIKKIFEDRYVNQKDVKSEKKATGVKYFFEKLRF 417
IKSGKVV++LAGRYAGRKA+VVK D+GS+ ++FGHAIVAGIDRYPR+V KAM KAK+ KRTK+KPFVK VN NH+MPTRY D DLKK VDE AL + +R + +K +KK+FE++Y NQ KSEKKA G +YFF+KLRF
Sbjct: 1 IKSGKVVILLAGRYAGRKAVVVKTNDDGSDGKRFGHAIVAGIDRYPRKVVKAMGKAKIEKRTKIKPFVKVVNFNHIMPTRYAADFDLKKVVDEKALSSEARVDTRKNLKKVFEEKYRNQSS-KSEKKAGGTQYFFKKLRF 139
BLAST of mRNA_H-paniculata_contig4855.11980.1 vs. uniprot
Match: A0A024GB05_9STRA (Uncharacterized protein n=3 Tax=Albugo TaxID=65356 RepID=A0A024GB05_9STRA) HSP 1 Score: 184 bits (467), Expect = 9.770e-54 Identity = 94/141 (66.67%), Postives = 117/141 (82.98%), Query Frame = 1
Query: 1 IKSGKVVVMLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKAKVTKRTKLKPFVKYVNVNHLMPTRYQVDMDLKKAVDETALKT--SRPEVKKAIKKIFEDRYVNQKDVKSEKKATGVKYFFEKLRF 417
IK+GKVVV+L GR+AGRKAIVVK FDEG +RK+G AIVAGIDRYPR+VT++M K K+ K++K+KPFVKYVN NH+MPTRY VD+DLKK +D+ + SR E +K IKK+FE+RY+NQ D SEKKATGV +FF+KLRF
Sbjct: 34 IKNGKVVVLLNGRFAGRKAIVVKAFDEGVGDRKYGFAIVAGIDRYPRKVTRSMGKNKIKKKSKIKPFVKYVNYNHMMPTRYIVDIDLKKVLDDDVMSKPESRVETRKTIKKVFEERYLNQADCSSEKKATGVSFFFKKLRF 174
BLAST of mRNA_H-paniculata_contig4855.11980.1 vs. uniprot
Match: A0A2D4BF17_PYTIN (60S ribosomal protein L27 n=3 Tax=Eukaryota TaxID=2759 RepID=A0A2D4BF17_PYTIN) HSP 1 Score: 183 bits (464), Expect = 1.050e-53 Identity = 93/141 (65.96%), Postives = 118/141 (83.69%), Query Frame = 1
Query: 1 IKSGKVVVMLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKAKVTKRTKLKPFVKYVNVNHLMPTRYQVDMDLKKAVDETALKT--SRPEVKKAIKKIFEDRYVNQKDVKSEKKATGVKYFFEKLRF 417
+K+GKVV+ML GR+AGRKA+VVK DEG +RKFGHAIVAGIDRYPR+VT+AMSK K+ K++K+KPF+K VN++H+MPTRY VD+DLKK +D+ L SR E +K IKK+FE+RY+NQ VKSEKKA GV +FF+KLRF
Sbjct: 4 VKNGKVVIMLNGRFAGRKAVVVKTHDEGHGDRKFGHAIVAGIDRYPRKVTRAMSKTKLKKKSKVKPFIKVVNLSHVMPTRYVVDIDLKKVLDDEVLANPESRIESRKTIKKVFEERYLNQSAVKSEKKAAGVSFFFKKLRF 144 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4855.11980.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4855.11980.1 >prot_H-paniculata_contig4855.11980.1 ID=prot_H-paniculata_contig4855.11980.1|Name=mRNA_H-paniculata_contig4855.11980.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=132bp MLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKAKVback to top mRNA from alignment at H-paniculata_contig4855:9893..14039+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4855.11980.1 ID=mRNA_H-paniculata_contig4855.11980.1|Name=mRNA_H-paniculata_contig4855.11980.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4147bp|location=Sequence derived from alignment at H-paniculata_contig4855:9893..14039+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4855:9893..14039+ >mRNA_H-paniculata_contig4855.11980.1 ID=mRNA_H-paniculata_contig4855.11980.1|Name=mRNA_H-paniculata_contig4855.11980.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=792bp|location=Sequence derived from alignment at H-paniculata_contig4855:9893..14039+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |