mRNA_H-paniculata_contig4854.11976.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4854.11976.1
Unique NamemRNA_H-paniculata_contig4854.11976.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig4854.11976.1 vs. uniprot
Match: A0A7S3NFY8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NFY8_9STRA)

HSP 1 Score: 299 bits (765), Expect = 3.080e-101
Identity = 150/192 (78.12%), Postives = 168/192 (87.50%), Query Frame = 1
Query:    1 MGIDLVAGGRRVGHKVRSAPVSKNVYLGLLVKLFRFLARRTDSDFAKVVLKRLYMSKTNRAPLSISRLARYMRGKEASTAVIVGAVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITLDQLALRAPKGSNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDGVKPYVRSKGRKFEKARGRRRSNGFKV 576
            MGIDL AGGRRVGHK RS P+S NVYL LLVKL+RFLARRTDS F KVVLKRLYMS+TNR PLS+SRLAR+M+ K+  TAVIVG VTDD RLLEVPK+SVCALRFTETARARIL +GGEC+T DQLALRAPKGS TVLLRGPK  RE  +HFGHR+T  ++ THD VKPYVRSKGRKFE+ARGRR++NGFK+
Sbjct:    1 MGIDLKAGGRRVGHKARSEPLSDNVYLKLLVKLYRFLARRTDSKFVKVVLKRLYMSRTNRPPLSVSRLARFMKDKDEKTAVIVGTVTDDPRLLEVPKMSVCALRFTETARARILKSGGECLTFDQLALRAPKGSGTVLLRGPKKVREVYKHFGHRSTPTSVKTHDHVKPYVRSKGRKFERARGRRKTNGFKI 192          
BLAST of mRNA_H-paniculata_contig4854.11976.1 vs. uniprot
Match: A0A7S2UVJ6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVJ6_9STRA)

HSP 1 Score: 298 bits (764), Expect = 4.370e-101
Identity = 152/192 (79.17%), Postives = 169/192 (88.02%), Query Frame = 1
Query:    1 MGIDLVAGGRRVGHKVRSAPVSKNVYLGLLVKLFRFLARRTDSDFAKVVLKRLYMSKTNRAPLSISRLARYMRGKEASTAVIVGAVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITLDQLALRAPKGSNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDGVKPYVRSKGRKFEKARGRRRSNGFKV 576
            MGIDL AGGRRVGHKVR++P SKNVYL LLV+L+RFLARRTDS F KVVLKRLYMSKTN  P+SISRL RYM+GKE  TAVIVG VTDD RLL++P L VCAL+FTE ARARIL AGGE +T DQLAL+ PKG+ TVLLRGPKNAREAVRHFGHR+T++++HTH GVKPYVRSKGRKFEKARGRR S GFKV
Sbjct:    1 MGIDLKAGGRRVGHKVRTSPKSKNVYLNLLVRLYRFLARRTDSKFVKVVLKRLYMSKTNSPPMSISRLTRYMKGKEDQTAVIVGTVTDDSRLLKLPALKVCALKFTEAARARILKAGGEVLTFDQLALQQPKGAGTVLLRGPKNAREAVRHFGHRSTLDSVHTHCGVKPYVRSKGRKFEKARGRRGSRGFKV 192          
BLAST of mRNA_H-paniculata_contig4854.11976.1 vs. uniprot
Match: A0A835ZAE3_9STRA (Cytoplasmic ribosomal protein L18 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAE3_9STRA)

HSP 1 Score: 298 bits (764), Expect = 4.370e-101
Identity = 150/192 (78.12%), Postives = 168/192 (87.50%), Query Frame = 1
Query:    1 MGIDLVAGGRRVGHKVRSAPVSKNVYLGLLVKLFRFLARRTDSDFAKVVLKRLYMSKTNRAPLSISRLARYMRGKEASTAVIVGAVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITLDQLALRAPKGSNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDGVKPYVRSKGRKFEKARGRRRSNGFKV 576
            MGIDLVAGGRRVGHK RSAP S NVYLGLL KL++FLARRT+S+F   VLKRLYMSKTNR PL + RL+++M GK+  TAV+V  VTDD RLLEVPK++VCALRFTE+AR+RI+AAGGEC+T DQLAL+ P GSN VLLRGPKNAREA RHFGHRTTV N HTH+GVKPYVRSKGRKFEKARGRR SNGFKV
Sbjct:    1 MGIDLVAGGRRVGHKARSAPKSDNVYLGLLSKLYKFLARRTNSNFVATVLKRLYMSKTNRPPLGLGRLSKFMIGKDGLTAVVVATVTDDNRLLEVPKMTVCALRFTESARSRIVAAGGECLTFDQLALKVPTGSNCVLLRGPKNAREANRHFGHRTTVTNPHTHNGVKPYVRSKGRKFEKARGRRASNGFKV 192          
BLAST of mRNA_H-paniculata_contig4854.11976.1 vs. uniprot
Match: F0Y951_AURAN (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y951_AURAN)

HSP 1 Score: 283 bits (725), Expect = 3.810e-95
Identity = 143/192 (74.48%), Postives = 163/192 (84.90%), Query Frame = 1
Query:    1 MGIDLVAGGRRVGHKVRSAPVSKNVYLGLLVKLFRFLARRTDSDFAKVVLKRLYMSKTNRAPLSISRLARYMRGKEASTAVIVGAVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITLDQLALRAPKGSNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDGVKPYVRSKGRKFEKARGRRRSNGFKV 576
            MGID+VAGGRRVGHK R+   S+NVYL LLVKL+RFLARRTDS F K VLKRL+MS+TNR PLS+S LAR+MR K+   AV+VG +TDD R+L VPK++VCALRFTETARARI+ AGGEC+T DQLALRAPKGSNTVLLRGPK ARE   HFGHR+T  ++ TH GVKPYVR+KGRKFEKARGRR S GFKV
Sbjct:    1 MGIDIVAGGRRVGHKARTDTKSENVYLKLLVKLYRFLARRTDSAFVKTVLKRLFMSRTNRPPLSLSALARFMREKDDKIAVLVGTITDDPRMLTVPKMTVCALRFTETARARIVKAGGECLTFDQLALRAPKGSNTVLLRGPKKAREVYSHFGHRSTTTSVKTHCGVKPYVRAKGRKFEKARGRRHSRGFKV 192          
BLAST of mRNA_H-paniculata_contig4854.11976.1 vs. uniprot
Match: A0A7S2BC13_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BC13_9STRA)

HSP 1 Score: 284 bits (726), Expect = 4.040e-95
Identity = 148/194 (76.29%), Postives = 164/194 (84.54%), Query Frame = 1
Query:    1 MGIDLVAGGRRVGHKVRSAPVSKNVYLGLLVKLFRFLARRTDSDFAKVVLKRLYMSKTNRAPLSISRLARYMRGKEAS--TAVIVGAVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITLDQLALRAPKGSNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDGVKPYVRSKGRKFEKARGRRRSNGFKV 576
            MGIDLVAGGRRVGHKVR+APVS NVYL LLVKL+ FLARRT SDF K V KRL+MSKTN+ P+S+S++A+YM  +E    TAVIVG VTDD+RL E+P L VCALRFTE ARARI+ AGGEC+T DQLAL APKGSN VLLRG  N REA++HFGHR TV NLHTHD VKPYVRSKGRKFEKARGRRRS GFKV
Sbjct:   12 MGIDLVAGGRRVGHKVRTAPVSDNVYLKLLVKLYAFLARRTGSDFCKTVTKRLFMSKTNKPPISVSKIAKYMTPQEGKGKTAVIVGTVTDDIRLSELPALRVCALRFTEGARARIVKAGGECLTFDQLALEAPKGSNCVLLRGSMN-REALKHFGHRCTVKNLHTHDNVKPYVRSKGRKFEKARGRRRSTGFKV 204          
BLAST of mRNA_H-paniculata_contig4854.11976.1 vs. uniprot
Match: A0A4D9D1Z3_9STRA (Ribosomal_L18e/L15P domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1Z3_9STRA)

HSP 1 Score: 280 bits (716), Expect = 8.630e-94
Identity = 142/192 (73.96%), Postives = 163/192 (84.90%), Query Frame = 1
Query:    1 MGIDLVAGGRRVGHKVRSAPVSKNVYLGLLVKLFRFLARRTDSDFAKVVLKRLYMSKTNRAPLSISRLARYMRGKEASTAVIVGAVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITLDQLALRAPKGSNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDGVKPYVRSKGRKFEKARGRRRSNGFKV 576
            MGIDL +GGRR GHK R+AP S NVYL LLVKL+RFLARRTDS+F  V+LKRL+MSK NR P++ISRL R+M+GKE  TAVIVG +TDD R+LEVPKLSV AL+ T TARARIL AGGE +T D+LALRAPKG+N VLLRGP + REA+ HFGHR+TV N+HTHD VKPY RSKGRKFEKARGRRRS GFK+
Sbjct:    1 MGIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDSNFNAVILKRLFMSKNNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHD-REALSHFGHRSTVGNVHTHDNVKPYTRSKGRKFEKARGRRRSTGFKI 191          
BLAST of mRNA_H-paniculata_contig4854.11976.1 vs. uniprot
Match: A0A5D6XV36_9STRA (Ribosomal_L18e/L15P domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=A0A5D6XV36_9STRA)

HSP 1 Score: 273 bits (699), Expect = 4.860e-91
Identity = 138/191 (72.25%), Postives = 161/191 (84.29%), Query Frame = 1
Query:    4 GIDLVAGGRRVGHKVRSAPVSKNVYLGLLVKLFRFLARRTDSDFAKVVLKRLYMSKTNRAPLSISRLARYMRGKEASTAVIVGAVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITLDQLALRAPKGSNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDGVKPYVRSKGRKFEKARGRRRSNGFKV 576
            GIDL+AGG+ VG K R+AP S+NVYL LLV+L+RFLARRT+S F  +VL+RLY S TN+AP+SI R+ARYM G E   AVIVG VTDD+RLL VPK+SV AL FTETARARI  AGGEC++ DQLALRAPKG+NTVLLRG + ARE  RHFGH++TVN++HTHD VKPYVRSKGRKFE ARGRR+S GFKV
Sbjct:   12 GIDLIAGGKVVGKKNRTAPKSENVYLNLLVRLYRFLARRTNSKFNSIVLRRLYQSNTNQAPMSIGRVARYMTGHEGKLAVIVGTVTDDIRLLNVPKVSVVALAFTETARARITNAGGECLSFDQLALRAPKGANTVLLRGRRTAREVYRHFGHKSTVNSVHTHDHVKPYVRSKGRKFEMARGRRKSRGFKV 202          
BLAST of mRNA_H-paniculata_contig4854.11976.1 vs. uniprot
Match: A0A2D4C5G9_PYTIN (60S ribosomal protein L182 putative n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4C5G9_PYTIN)

HSP 1 Score: 272 bits (695), Expect = 1.410e-90
Identity = 134/192 (69.79%), Postives = 163/192 (84.90%), Query Frame = 1
Query:    1 MGIDLVAGGRRVGHKVRSAPVSKNVYLGLLVKLFRFLARRTDSDFAKVVLKRLYMSKTNRAPLSISRLARYMRGKEASTAVIVGAVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITLDQLALRAPKGSNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDGVKPYVRSKGRKFEKARGRRRSNGFKV 576
            MGIDL+AGG+ VG K R+AP SK+VYL LLV+L+RFLARRTDS F  +VLKRLY S TN+ P+SI+R+ARYM+  E   AV+VG+VTDD+RL +VPKL++ ALRFTETARARI+ AGGEC+T DQLALRAPKG+NTVLLRG K ARE  +HFGH++T+ ++ TH G KPYVRSKGRKFE+ARGRR+S GFKV
Sbjct:    1 MGIDLIAGGKVVGKKSRTAPKSKDVYLNLLVRLYRFLARRTDSKFNSIVLKRLYQSNTNQVPMSIARVARYMKDHEGKIAVVVGSVTDDIRLFDVPKLTIAALRFTETARARIVKAGGECLTFDQLALRAPKGANTVLLRGRKTAREVYKHFGHKSTLESVGTHCGAKPYVRSKGRKFERARGRRKSRGFKV 192          
BLAST of mRNA_H-paniculata_contig4854.11976.1 vs. uniprot
Match: A0A8D0ZR79_PIG (Ribosomal_L18e/L15P domain-containing protein n=3 Tax=Eukaryota TaxID=2759 RepID=A0A8D0ZR79_PIG)

HSP 1 Score: 270 bits (691), Expect = 1.620e-90
Identity = 140/157 (89.17%), Postives = 146/157 (92.99%), Query Frame = 1
Query:  106 FLARRTDSDFAKVVLKRLYMSKTNRAPLSISRLARYMRGKEASTAVIVGAVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITLDQLALRAPKGSNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDGVKPYVRSKGRKFEKARGRRRSNGFKV 576
            FL RRTDS FAKVVLKRLYMSKTNRAPLS+SRL   +R KE STAV+VG VTDDVRLL VPKLSVCALRFTETARARILAAGGECIT DQLALRAPKG+NTVLLRGPKNAREAVRHFGH+TTVNNLHTHD VKPYVRSKGRKFEKARGRRRSNGFK+
Sbjct:    2 FLTRRTDSAFAKVVLKRLYMSKTNRAPLSLSRL---VRNKETSTAVLVGTVTDDVRLLAVPKLSVCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFGHKTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKI 155          
BLAST of mRNA_H-paniculata_contig4854.11976.1 vs. uniprot
Match: A0A7S2W9J6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W9J6_9STRA)

HSP 1 Score: 270 bits (691), Expect = 7.760e-90
Identity = 140/192 (72.92%), Postives = 160/192 (83.33%), Query Frame = 1
Query:    1 MGIDLVAGGRRVGHKVRSAPVSKNVYLGLLVKLFRFLARRTDSDFAKVVLKRLYMSKTNRAPLSISRLARYMRGKEASTAVIVGAVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITLDQLALRAPKGSNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDGVKPYVRSKGRKFEKARGRRRSNGFKV 576
            MGIDL AGGR+V HK R AP S+NVYL LLVKL+ FL+RRTDS F KVVLKRLYMSK N+ P+S+S++AR+M   E   AVIVG VTDDVRL E+PKL VCALRFT  ARARIL AGGEC+T DQLAL AP GS TVLLRG KN REA++HFGH+T+V + HTHD VKPY+R+KGRKFE+ARGRRRSNGFKV
Sbjct:   11 MGIDLKAGGRKVHHKERKAPKSQNVYLKLLVKLYSFLSRRTDSKFCKVVLKRLYMSKLNKPPISVSKIARFMGAHEDKIAVIVGPVTDDVRLTELPKLRVCALRFTAGARARILKAGGECLTFDQLALVAPSGSKTVLLRGSKN-REALKHFGHKTSVASPHTHDNVKPYIRAKGRKFERARGRRRSNGFKV 201          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4854.11976.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3NFY8_9STRA3.080e-10178.13Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2UVJ6_9STRA4.370e-10179.17Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835ZAE3_9STRA4.370e-10178.13Cytoplasmic ribosomal protein L18 n=1 Tax=Tribonem... [more]
F0Y951_AURAN3.810e-9574.48Ribosomal_L18e/L15P domain-containing protein n=1 ... [more]
A0A7S2BC13_9STRA4.040e-9576.29Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A4D9D1Z3_9STRA8.630e-9473.96Ribosomal_L18e/L15P domain-containing protein n=2 ... [more]
A0A5D6XV36_9STRA4.860e-9172.25Ribosomal_L18e/L15P domain-containing protein n=2 ... [more]
A0A2D4C5G9_PYTIN1.410e-9069.7960S ribosomal protein L182 putative n=2 Tax=Pythiu... [more]
A0A8D0ZR79_PIG1.620e-9089.17Ribosomal_L18e/L15P domain-containing protein n=3 ... [more]
A0A7S2W9J6_9STRA7.760e-9072.92Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4854contigH-paniculata_contig4854:11814..13476 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score349.7
Seed ortholog evalue8.5e-94
Seed eggNOG ortholog2880.D7FML2
Preferred nameRPL18
KEGG koko:K02883,ko:K18749,ko:K21442
KEGG Pathwayko03010,map03010
KEGG ModuleM00177,M00179
Hectar predicted targeting categoryother localisation
GOsGO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005840,GO:0005886,GO:0005911,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009506,GO:0009507,GO:0009536,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0030054,GO:0031090,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0055044,GO:0071704,GO:0071944,GO:0097159,GO:0098588,GO:0098805,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
EggNOG free text desc.ribosomal protein
EggNOG OGsCOG1727@1,KOG1714@2759
Ec32 ortholog descriptioncytoplasmic ribosomal protein L18
Ec32 orthologEc-23_000720.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011,ko03019,ko04131
Exons3
Model size582
Cds size582
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4854.11976.1prot_H-paniculata_contig4854.11976.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4854 11814..13476 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930436.8582766-CDS-H-paniculata_contig4854:11813..121111622930436.8582766-CDS-H-paniculata_contig4854:11813..12111Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4854 11814..12111 +
1691481291.7796555-CDS-H-paniculata_contig4854:11813..121111691481291.7796555-CDS-H-paniculata_contig4854:11813..12111Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4854 11814..12111 +
1622930436.8728988-CDS-H-paniculata_contig4854:12902..130741622930436.8728988-CDS-H-paniculata_contig4854:12902..13074Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4854 12903..13074 +
1691481291.7919247-CDS-H-paniculata_contig4854:12902..130741691481291.7919247-CDS-H-paniculata_contig4854:12902..13074Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4854 12903..13074 +
1622930436.8860066-CDS-H-paniculata_contig4854:13364..134761622930436.8860066-CDS-H-paniculata_contig4854:13364..13476Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4854 13365..13476 +
1691481291.8021276-CDS-H-paniculata_contig4854:13364..134761691481291.8021276-CDS-H-paniculata_contig4854:13364..13476Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4854 13365..13476 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4854.11976.1

>prot_H-paniculata_contig4854.11976.1 ID=prot_H-paniculata_contig4854.11976.1|Name=mRNA_H-paniculata_contig4854.11976.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=194bp
MGIDLVAGGRRVGHKVRSAPVSKNVYLGLLVKLFRFLARRTDSDFAKVVL
KRLYMSKTNRAPLSISRLARYMRGKEASTAVIVGAVTDDVRLLEVPKLSV
CALRFTETARARILAAGGECITLDQLALRAPKGSNTVLLRGPKNAREAVR
HFGHRTTVNNLHTHDGVKPYVRSKGRKFEKARGRRRSNGFKVR*
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mRNA from alignment at H-paniculata_contig4854:11814..13476+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4854.11976.1 ID=mRNA_H-paniculata_contig4854.11976.1|Name=mRNA_H-paniculata_contig4854.11976.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1663bp|location=Sequence derived from alignment at H-paniculata_contig4854:11814..13476+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGTATCGATCTAGTAGCCGGAGGTCGTAGGGTTGGCCACAAGGTCCG TTCGGCCCCTGTGTCGAAGAATGTTTATCTTGGACTTCTTGTGAAGCTTT TTAGGTTTCTCGCCCGCAGGACCGACAGCGACTTCGCGAAGGTGGTCCTC AAGCGGCTGTACATGTCCAAGACGAACCGTGCGCCATTATCTATCTCGCG CCTGGCGAGGTACATGAGAGGCAAGGAGGCGAGCACGGCTGTGATTGTCG GAGCTGTGACTGATGACGTGCGCCTTCTTGAGGTGCCCAAGCTGTCCGGT GAGAGTCTGCCAAGTTTATTACAAAATGGTGAAAACGTTTGCTGCCACCA TAATAACCTGAGGGGCTGCTGAGGAACTGCGACAAGGCTCAGCTGTTACG CGGTCAACACCCCTGGCATTTGTGTCCGTAACATGTCTTCTTAGTTGTGA ATTATATCACACCACTGTGTATCATTTTGCCACGTTATGATTGCTTTGGT CTTCGGCAACGAGGATGTCTCAAAAGCAATTAAATACGAAGTGTGTAAAT CTCTATTGATTGGCTTATTACATCAATACAGGTATTTCTCACAAGCCCAT CATGCAAAGAAGCTTGTCGTTTGTTTCCATGCCAATATGTTATGGCGTGT ATCGTTCCAGTGGTTTATTCATGAGAAGAACAAGGTGATGATCGTATGCC AAGAGTTTTCTGGACAAATGACTTTAGTACCAGGATGTTACGTGTATCCC GCGTTACACCTTTGCAGGATCGTTCTCATCACACTTAATATTCGACCTTG CCAGTCAAGATCTAATGTGTATGACGAAAGAGTATTGATCTTGTGGGTGC ATGCTTCCATAGCGTGAGAATTGGACCCACATGAAGTCGAGCTTTCCTTA TTGACTGTTGCGTTTCATTCTTGAGTAAAGTATTGTCAGTCCAGACGAGT CTTATCTCTCACGTTGGGTTTTTTTCCCATCAGACACTTGCTCTGGCACT CTCTTCCACCAGTCATGTCTTGTATTCCTGAAATATAGGGTTGATTTCCA CTGACACAAGTAAAAAATCGTCCGCCTGGATGAGCCCAGTGTGCGCACTC AGGTTCACTGAGACTGCGCGCGCCCGGATTCTGGCTGCGGGCGGTGAGTG CATCACCTTGGACCAGCTTGCGCTACGGGCACCCAAGGGATCAAACACCG TCCTTCTTCGTGGACCCAAGAACGCGCGCGAGGCTGTCAGACACTTCGGT CACAGGACCACGTGAGTTGAACTAGTTATATGCAACGAGTTCGAAAACAC CTGGAGAACCTGACGTGATCATGTATTCTTCAAACGATACCAACATGCCC GTTGTGTGGTGAAACGAAATCCGTTACATGTGTGGAATATGACGGGGCAA ATGTGTTGGTAGTCAATTTTTGTTGTTCCATCTATTCAACCGTGGTCATC GATGTCCGAACTTTACCGCCACAAACCACGTGACGTTCAAGGTGATATCG TTCAAGTTTCTTGCTCCCTTTGCTACGTCATTGTTCGTCTCATTCTTTCA GTGTGAACAACTTGCACACACACGACGGTGTGAAGCCCTACGTGCGTTCC AAGGGACGTAAGTTCGAGAAGGCTCGTGGTCGCCGCAGGTCGAACGGCTT CAAGGTGAGATGA
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Coding sequence (CDS) from alignment at H-paniculata_contig4854:11814..13476+

>mRNA_H-paniculata_contig4854.11976.1 ID=mRNA_H-paniculata_contig4854.11976.1|Name=mRNA_H-paniculata_contig4854.11976.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1164bp|location=Sequence derived from alignment at H-paniculata_contig4854:11814..13476+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGTATCGATCTAGTAGCCGGAGGTCGTAGGGTTGGCCACAAGGTCCG
TTCGGCCCCTGTGTCGAAGAATGTTTATCTTGGACTTCTTGTGAAGCTTT
TTAGGTTTCTCGCCCGCAGGACCGACAGCGACTTCGCGAAGGTGGTCCTC
AAGCGGCTGTACATGTCCAAGACGAACCGTGCGCCATTATCTATCTCGCG
CCTGGCGAGGTACATGAGAGGCAAGGAGGCGAGCACGGCTGTGATTGTCG
GAGCTGTGACTGATGACGTGCGCCTTCTTGAGGTGCCCAAGCTGTCCGAT
GGGTATCGATCTAGTAGCCGGAGGTCGTAGGGTTGGCCACAAGGTCCGTT
CGGCCCCTGTGTCGAAGAATGTTTATCTTGGACTTCTTGTGAAGCTTTTT
AGGTTTCTCGCCCGCAGGACCGACAGCGACTTCGCGAAGGTGGTCCTCAA
GCGGCTGTACATGTCCAAGACGAACCGTGCGCCATTATCTATCTCGCGCC
TGGCGAGGTACATGAGAGGCAAGGAGGCGAGCACGGCTGTGATTGTCGGA
GCTGTGACTGATGACGTGCGCCTTCTTGAGGTGCCCAAGCTGTCCGTGTG
CGCACTCAGGTTCACTGAGACTGCGCGCGCCCGGATTCTGGCTGCGGGCG
GTGAGTGCATCACCTTGGACCAGCTTGCGCTACGGGCACCCAAGGGATCA
AACACCGTCCTTCTTCGTGGACCCAAGAACGCGCGCGAGGCTGTCAGACA
CTTCGGTCACAGGACCACTGTGCGCACTCAGGTTCACTGAGACTGCGCGC
GCCCGGATTCTGGCTGCGGGCGGTGAGTGCATCACCTTGGACCAGCTTGC
GCTACGGGCACCCAAGGGATCAAACACCGTCCTTCTTCGTGGACCCAAGA
ACGCGCGCGAGGCTGTCAGACACTTCGGTCACAGGACCACTGTGAACAAC
TTGCACACACACGACGGTGTGAAGCCCTACGTGCGTTCCAAGGGACGTAA
GTTCGAGAAGGCTCGTGGTCGCCGCAGGTCGAACGGCTTCAAGGTGAGAT
GATGTGAACAACTTGCACACACACGACGGTGTGAAGCCCTACGTGCGTTC
CAAGGGACGTAAGTTCGAGAAGGCTCGTGGTCGCCGCAGGTCGAACGGCT
TCAAGGTGAGATGA
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