prot_H-paniculata_contig4854.11975.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4854.11975.1
Unique Nameprot_H-paniculata_contig4854.11975.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length427
Homology
BLAST of mRNA_H-paniculata_contig4854.11975.1 vs. uniprot
Match: A0A6H5KCC9_9PHAE (PSII_BNR domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCC9_9PHAE)

HSP 1 Score: 647 bits (1668), Expect = 3.940e-231
Identity = 336/427 (78.69%), Postives = 365/427 (85.48%), Query Frame = 0
Query:    3 TAPLASACIVLILNGAGAFVPSLHGTLTQSSRQTVRIA---SEVHSISRRPMSVSMSVDVSKSRIGFLEDSATVSMAAGALVLGTSTGLASPAEAAQVSAWEQISLPVASVLYDIAFDPVVPDHGLVVGAQGTFLETFDGGNKWGVRTFGNLDEEEEINYRFQKVSMFKDEIFIVGKPPILLHSKDSGKSWERVPLSPKLPGEPSNIVALGDGKAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAEDGSYLAVSSRGNFYLTWQPGQDFWIPHNRGTSRRIQNMGFVKESAADGLWMTLNGGAMALSTQPPEGTTDPVFGDVAIKSGGYGIIDVAWKDEKEVWAVGGGGSLWYSTDSGKSFKFSSGANNIGANLYDVKFFGGDKGFVIGSDGVLLKYIPDQL 426
            TA  +   ++  L G  AFVP  HG LT++++Q V+         + S RPM +S+  DVS+SR GFL+DSA + +A GA+ +G STG    AEAA VSAWEQI LPVASVLYDIAFDP  PDHGLVVGAQGTFLETFDGG KW VRTFGNLDEEEEINYRFQKVSM+ DEIFI+GKPPILLHSKD+GK+WERVPLSPKLPGEPSNIVALG  KAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAEDGSYLAVSSRGNFYLTW PGQDFWIPHNRGTSRRIQNMGFV+  AA+GLWMTLNGGAM +S   PEGT DPVF + AIKSGGYGIIDVAWK++ E WAVGGGGSLWYSTD G++FKFSSGA NIGANLYDVKFFGGDKGF IGSDGVLLKYIPDQL
Sbjct:    2 TASKSGCALLAALAGVSAFVP--HG-LTKTAQQQVKGGFGHEHTSAASSRPMRMSLD-DVSESRGGFLKDSA-LGLAVGAVAVGASTGAPPAAEAATVSAWEQIQLPVASVLYDIAFDPEHPDHGLVVGAQGTFLETFDGGYKWSVRTFGNLDEEEEINYRFQKVSMYNDEIFIIGKPPILLHSKDAGKTWERVPLSPKLPGEPSNIVALGGAKAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAEDGSYLAVSSRGNFYLTWSPGQDFWIPHNRGTSRRIQNMGFVRGRAAEGLWMTLNGGAMQMSKTLPEGTNDPVFSETAIKSGGYGIIDVAWKNDNEAWAVGGGGSLWYSTDGGETFKFSSGATNIGANLYDVKFFGGDKGFAIGSDGVLLKYIPDQL 423          
BLAST of mRNA_H-paniculata_contig4854.11975.1 vs. uniprot
Match: A0A836CNS8_9STRA (Photosynthesis system II assembly factor YCF48-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNS8_9STRA)

HSP 1 Score: 494 bits (1273), Expect = 3.980e-171
Identity = 253/373 (67.83%), Postives = 290/373 (77.75%), Query Frame = 0
Query:   56 SVDVSKSRIGFLEDSATVSMAAGALVLGTSTGLASP--AEAA--QVSAWEQISLPVASVLYDIAFDPVVPDHGLVVGAQGTFLETFDGGNKWGVRTFGNLDEEEEINYRFQKVSMFKDEIFIVGKPPILLHSKDSGKSWERVPLSPKLPGEPSNIVALGDGKAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAEDGSYLAVSSRGNFYLTWQPGQDFWIPHNRGTSRRIQNMGFVKESAADGLWMTLNGGAMALSTQPPEGT--TDPVFGDVAIKSGGYGIIDVAWKDEKEVWAVGGGGSLWYSTDSGKSFKFSSGANNIGANLYDVKFFGGDKGFVIGSDGVLLKYI 422
            S+D  +SR  F + S+   +  GA  +    G+ +P  AEAA  +V AWEQI+LPVA+ LYDIAFD     HG VVGA+GTFLET DGG  W  RTFGNLD EEEINYRF+KVS    E FI+GKPPILLH+KD G+SWERVPLSPKLPGEPSNIVALG GKAEMTTS+GA+YYT NAG+NW AQVKET+DATLNRISSSGVSGASYFTGSIIGT R + G+YLAVSSRGNFYLTWQPGQDFWIPHNRGTSRRIQNMGFV+     G+WMTLNGG M +S      +  TDP F  V IK+GGYGIID AWKD KE WAVGGGG+LW S D GK++K+   A+ I  NLY +KFF  + GFV+GSDGVLL+Y+
Sbjct:   45 SLDTVESRRDFFKSSSA--LVGGAAAVAGLAGVTAPSAAEAAPVKVKAWEQIALPVATTLYDIAFDTADTQHGFVVGAKGTFLETRDGGKTWDPRTFGNLDAEEEINYRFEKVSFVDGEAFIIGKPPILLHTKDKGESWERVPLSPKLPGEPSNIVALGSGKAEMTTSTGAVYYTNNAGLNWKAQVKETIDATLNRISSSGVSGASYFTGSIIGTLRDKSGAYLAVSSRGNFYLTWQPGQDFWIPHNRGTSRRIQNMGFVEGDINKGVWMTLNGGVMQISKSGDSLSVATDPTFEPVDIKTGGYGIIDAAWKDAKEAWAVGGGGNLWVSMDGGKTYKYDKVADKIPGNLYTIKFFSPESGFVLGSDGVLLRYL 415          
BLAST of mRNA_H-paniculata_contig4854.11975.1 vs. uniprot
Match: A0A7S3XNC3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNC3_HETAK)

HSP 1 Score: 456 bits (1174), Expect = 8.870e-156
Identity = 217/325 (66.77%), Postives = 259/325 (79.69%), Query Frame = 0
Query:   99 AWEQISLPVASVLYDIAFDPVVPDHGLVVGAQGTFLETFDGGNKWGVRTFGNLDEEEEINYRFQKVSMFKDEIFIVGKPPILLHSKDSGKSWERVPLSPKLPGEPSNIVALGDGKAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAEDGSYLAVSSRGNFYLTWQPGQDFWIPHNRGTSRRIQNMGFVKESAADGLWMTLNGGAMALSTQPPE--GTTDPVFGDVAIKSGGYGIIDVAWKDEKEVWAVGGGGSLWYSTDSGKSFKFSSGANNIGANLYDVKFFGGDKGFVIGSDGVLLKY 421
            AWE++ LP  + L+DI FD   PDHG +VGA+GTFLETF+GG  WGVRTF NLDE+EEINYRF+KVS    E +I+GKPPILLH++D GKSWER+PLSPKLPGEPS I+A G+ +AEMTTS+GAIYYT N   NW AQ+KET+DATLNR+SSSGVSGAS+F+G+I    R  +G+YLAVSSRGNFYLTW PGQDFWIPHNRGT RRIQNMGF+++   +G+WM+LNGG + L+    E  G  D  F D  IKSGGYGI+D  WKDEKEVWAVGGGG+++YS D G  FKF S A+ I  NLY  KFFG +KGFV+GSDGVLL+Y
Sbjct:  113 AWEKVELPSGATLFDIDFDTKNPDHGFLVGAKGTFLETFNGGKSWGVRTFSNLDEDEEINYRFEKVSFLDGEAWIIGKPPILLHTRDDGKSWERIPLSPKLPGEPSGIIATGNEQAEMTTSTGAIYYTGNQARNWKAQLKETIDATLNRVSSSGVSGASFFSGTINDCKRDVNGNYLAVSSRGNFYLTWVPGQDFWIPHNRGTPRRIQNMGFIQDDIKNGVWMSLNGGLLQLTEPGQEINGINDAKFKDAKIKSGGYGILDCTWKDEKEVWAVGGGGTMYYSRDGGNEFKFDSSADKIPGNLYTCKFFGPNKGFVLGSDGVLLRY 437          
BLAST of mRNA_H-paniculata_contig4854.11975.1 vs. uniprot
Match: A0A7S2XVG6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVG6_9STRA)

HSP 1 Score: 453 bits (1166), Expect = 6.350e-155
Identity = 242/408 (59.31%), Postives = 290/408 (71.08%), Query Frame = 0
Query:   20 AFVPSLHGTLTQS-SRQTVRIASE----VHSISRRPMSVSMSVDVSKSRIGFLEDSATVSMAAGALVLGTSTGLASPAEAAQVSAWEQISLPVASVLYDIAFDPVVPDHGLVVGAQGTFLETFDGGNKWGVRTFGNLDEEEEINYRFQKVSMFKDEIFIVGKPPILLHSKDSGKSWERVPLSPKLPGEPSNIVALGDGKAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAEDGSYLAVSSRGNFYLTWQPGQDFWIPHNRGTSRRIQNMGFVKESAADGLWMTLNGGAMALS-TQPPEGTTDPVFGDVAIKSGGYGIIDVAWKDEKEVWAVGGGGSLWYSTDSGKSFKFSSGANNIGANLYDVKFFGGDKGFVIGSDGVLLKY 421
            AF+P + G +  S S     I S     V SI+R     +     S  R  FL +SA V+ A  A+     + L   A AA+  AW  + LP ++ L+D+ FD   P+HG +VG++GTFLETFD G  WGVRTF  LD EEEI YRF+KVS    E +I+GKP ILLHSKD G++WER+PLSPKLPGEP +IVA G   AEMTTS+GAIYYT NA  N+ AQVKET+DATLNRISSSGVSGASYFTGSIIGT R   G+YLAVSSRGNFYLTWQPG DFWIPHNRGTSRRIQ MGFV++  + GLWMTLNGG + +S T      +D  F    IK+GGYGI DVAWKDE EVWAVGGGG+++ S D GK+F F++ A++I  NLY+VKFF   KGFV+GSDG+LLKY
Sbjct:   10 AFIPLIAGAVIASVSNAFTNIPSPSIAGVRSIARPLRMTAEQAAGSADRREFLVNSAKVATAGAAI-----SALPGSASAARSQAWTAVELPASTTLFDLDFDTKDPNHGFLVGSKGTFLETFDAGETWGVRTFSQLDAEEEITYRFEKVSFLDGEAWIIGKPSILLHSKDEGRNWERIPLSPKLPGEPCDIVATGAETAEMTTSAGAIYYTSNAARNFKAQVKETIDATLNRISSSGVSGASYFTGSIIGTIRDSTGAYLAVSSRGNFYLTWQPGDDFWIPHNRGTSRRIQQMGFVQDDLSKGLWMTLNGGVLQISKTGQDVSNSDVEFKAANIKTGGYGITDVAWKDENEVWAVGGGGTMFVSVDGGKNFVFNNAADDIPGNLYNVKFFKNGKGFVLGSDGILLKY 412          
BLAST of mRNA_H-paniculata_contig4854.11975.1 vs. uniprot
Match: A0A7R9U3Z4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3Z4_9STRA)

HSP 1 Score: 437 bits (1124), Expect = 8.830e-149
Identity = 235/422 (55.69%), Postives = 293/422 (69.43%), Query Frame = 0
Query:    4 APLASACIVLILNGAGAFVPSLHGTLTQSSRQTVRIASEVHSISRRPMSVSMSVDVSKSRIGFLEDSATVSMAAGALVLGTSTGLASP-AEAAQVSAWEQISLPVASVLYDIAFDPVVPDHGLVVGAQGTFLETFDGGNKWGVRTFGNLDEEEEINYRFQKVSMFKDEIFIVGKPPILLHSKDSGKSWERVPLSPKLPGEPSNIVALGDGKAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAEDGSYLAVSSRGNFYLTWQPGQDFWIPHNRGTSRRIQNMGFVKESAADGLWMTLNGGAMALS-TQPPEGTTDPV-FGDVAIKSGGYGIIDVAWKDEKEVWAVGGGGSLWYSTDSGKSFKFSSGANNIGANLYDVKFFGGDKGFVIGSDGVLLKYI 422
            AP++   +   L  A AF  +    L +SSR+ +R+            S + +V+   SR G LE +A         + G    L  P A  A  + W ++ +     LYDI+FDP  P HG++VGA+G+F E+FDGG  W  R+F  LD +EEI YRF++VS+   E +I+GKP ILLH+KDSGKSWERVPLSPKLPGEPS I+ LG G AEMTTS+GAIYYT N G+NW AQVKET+DATLNRISSSGV GASYF+GSI  T R + G YLAVSSRGNFYLTW+PGQDFWIPHNRGTSRRIQNMGF+K    +G+WM+LNGG + L+ T P   +TD + F  V + SGGYGIID+AWK+++EVWAVGG GS++ S D G SF F   A+ I  NLY V FFG D+GFV+GSDGVLL+Y+
Sbjct:    2 APISQLILATALPLAAAFTAAPR--LQRSSRELLRL------------SAAENVETGDSRRGALERAA---------LAGVGAALVRPEASEAGDAFWRRVDVGTTETLYDISFDPSDPKHGMLVGAKGSFFESFDGGKSWQPRSFSALDPDEEITYRFEQVSLNGGEAYIIGKPAILLHTKDSGKSWERVPLSPKLPGEPSTIIGLGSGNAEMTTSTGAIYYTTNGGLNWKAQVKETIDATLNRISSSGVKGASYFSGSIALTHRDDQGKYLAVSSRGNFYLTWEPGQDFWIPHNRGTSRRIQNMGFIKGIQDNGVWMSLNGGEVQLTATAPDMASTDLIDFKKVNLNSGGYGIIDLAWKNDREVWAVGGSGSIFVSRDGGGSFSFDKSADKIPGNLYSVSFFG-DQGFVLGSDGVLLRYV 399          
BLAST of mRNA_H-paniculata_contig4854.11975.1 vs. uniprot
Match: A0A7S2S971_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S971_9STRA)

HSP 1 Score: 439 bits (1128), Expect = 1.420e-148
Identity = 216/323 (66.87%), Postives = 257/323 (79.57%), Query Frame = 0
Query:  100 WEQISLPVASVLYDIAFDPVVPDHGLVVGAQGTFLETFDGGNKWGVRTFGNLDEEEEINYRFQKVSMFKDEIFIVGKPPILLHSKDSGKSWERVPLSPKLPGEPSNIVALGDGKAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAEDGSYLAVSSRGNFYLTWQPGQDFWIPHNRGTSRRIQNMGFVKESAADGLWMTLNGGAMALSTQPPE-GTTDPVFGDVAIKSGGYGIIDVAWKDEKEVWAVGGGGSLWYSTDSGKSFKFSSGANNIGANLYDVKFFGGDKGFVIGSDGVLLKY 421
            W Q+   V + L+DIAFD   P HG VVGA+GTFLET DGG  W  R+F NLD E+EINYRFQ VS   +E +I+GKP ILLHSKD+GK+WERVPLSPKLPGEP+ IVALG GKAEMTTS+GAIYYT+NAG NW AQVKET+DATLNR+SSSGVSGASYFTGSI    R   GSYLAVSSRGNFYLT++PG +FWIPHNRGTSRRIQ+MGF  E   +GLWM+LNGG + +S +  +  + +P F   +IK+GGYGIIDVAW+++ EVWAVGGGG++  S D GK+FKF + A++I  NLY VKFF  D GFV+GSDGVLL+Y
Sbjct:  133 WTQVDAGVDTTLFDIAFDTADPSHGYVVGARGTFLETVDGGKSWFPRSFTNLDAEDEINYRFQTVSFENNEAWIIGKPAILLHSKDAGKNWERVPLSPKLPGEPNGIVALGPGKAEMTTSTGAIYYTENAGRNWKAQVKETIDATLNRVSSSGVSGASYFTGSISSIERDSSGSYLAVSSRGNFYLTYRPGDEFWIPHNRGTSRRIQSMGFANEKLEEGLWMSLNGGLLEVSNKNTDLNSQEPEFDPSSIKTGGYGIIDVAWRNKNEVWAVGGGGTMHVSKDGGKTFKFDNSADDIPGNLYSVKFFK-DTGFVLGSDGVLLRY 454          
BLAST of mRNA_H-paniculata_contig4854.11975.1 vs. uniprot
Match: A0A7S2UBA7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UBA7_9STRA)

HSP 1 Score: 426 bits (1096), Expect = 1.770e-144
Identity = 219/375 (58.40%), Postives = 274/375 (73.07%), Query Frame = 0
Query:   51 MSVSMSVDVSKSRIGFLEDSATVSMAAGALVLGTSTGLASPAEAAQVSAWEQISLPVASVLYDIAFDPVVPDHGLVVGAQGTFLETFDGGNKWGVRTFGNLDEEEEINYRFQKVSMFKDEIFIVGKPPILLHSKDSGKSWERVPLSPKLPGEPSNIVALGDGKAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAEDGSYLAVSSRGNFYLTWQPGQDFWIPHNRGTSRRIQNMGFVKESAADGLWMTLNGGAMALSTQPPEGTTDPV-FGDVAIKSGGYGIIDVAWKDEKEVWAVGGGGSLWYSTDSGKSFKFSSGANNIGANLYDVKFFG--GDKGFVIGSDGVLLKYI 422
            +S+S +   S+ R  F+  + + +  A    +  S GL  PAEAA    W+QI LP    LYD+ FD   P HG +VGA+G F ET DGGN W  R+F NLD EEE+ YRFQ VS    E +++GKP ++LH+KDSGK+WER+PLSPKLPGEP++I+A G GKAEMTTSSGA+Y T+NAG NW AQVKET+DATLNRISSSGVSGASYF+GSII   R ++G+YLAVSSRGNF+LTW+PGQDFWIPHNRG SRRIQ+MGFV+     GLWMTLNGG + ++ +  +   D   F +  IK+GGYGI DVAW++  EVWAVGG  +++ S D GKSFKF   ANNI  NLY+VKFF    + G+ +GS+G+LLKYI
Sbjct:   34 LSMSAADSGSEGRRTFVTKTGSAAAMASLATVTGSAGLPQPAEAAASKMWKQIQLPFEDTLYDVDFDS--PTHGYLVGARGAFAETNDGGNTWEARSFSNLDAEEEVTYRFQVVSFQDGEGWVLGKPTLMLHTKDSGKTWERIPLSPKLPGEPTSILAKGPGKAEMTTSSGAVYVTENAGRNWKAQVKETIDATLNRISSSGVSGASYFSGSIINQVRDDEGAYLAVSSRGNFFLTWEPGQDFWIPHNRGQSRRIQSMGFVEGDIHKGLWMTLNGGKLLVANKDIDLKKDDFPFVEADIKTGGYGITDVAWRNTDEVWAVGGSNTMYVSFDGGKSFKFDKSANNIPGNLYNVKFFKQFSNAGWAVGSNGLLLKYI 406          
BLAST of mRNA_H-paniculata_contig4854.11975.1 vs. uniprot
Match: A0A7S2SCF7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SCF7_9STRA)

HSP 1 Score: 421 bits (1083), Expect = 1.390e-142
Identity = 214/353 (60.62%), Postives = 259/353 (73.37%), Query Frame = 0
Query:   72 TVSMAAGALVLGTSTGLASPAEAAQVSAWEQISLPVASVLYDIAFDPVVPDHGLVVGAQGTFLETFDGGNKWGVRTFGNLDEEEEINYRFQKVSMFKDEIFIVGKPPILLHSKDSGKSWERVPLSPKLPGEPSNIVALGDGKAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAEDGSYLAVSSRGNFYLTWQPGQDFWIPHNRGTSRRIQNMGFVKESAADGLWMTLNGGAMALSTQPPEGTTDPV-FGDVAIKSGGYGIIDVAWKDEKEVWAVGGGGSLWYSTDSGKSFKFSSGANNIGANLYDVKFFG--GDKGFVIGSDGVLLKY 421
            T S  A   +   + G+A+PAEAA    W +  +P    +YDI FD   P HG VVGA+G+  ET DGG  W  R+F NLD EEEI YRFQ VS    E +++GKP +LLH+KDSGKSWER+PLSPKLPGEPS+I+ALG  KAEMTTSSGA+Y T NAG NW AQVKET+DATLNRISSSGVSGASYFTGSII   R +DG+YLAVSSRGNF+LTW+PGQDFWIPHNRGTSRRIQNMGFV+     GLWMTLNGG + +S + P+ + D   F +  IK+GGYG+ DVAW++E E WAVGG  +++ S D GK F F   ANN   NLY V+FF    + G+ +GS+G+LL+Y
Sbjct:   50 TASATAALSIASVTGGVAAPAEAAASKMWTKSKVPFEETVYDIDFDS--PTHGYVVGARGSLAETNDGGLTWEPRSFSNLDAEEEITYRFQVVSFKDGEGWVLGKPALLLHTKDSGKSWERIPLSPKLPGEPSSILALGPSKAEMTTSSGAVYVTDNAGRNWKAQVKETIDATLNRISSSGVSGASYFTGSIINQVRDDDGAYLAVSSRGNFFLTWEPGQDFWIPHNRGTSRRIQNMGFVEGDIHKGLWMTLNGGKVFVSPKDPDLSQDAFEFFEADIKTGGYGVTDVAWRNENEAWAVGGSNTMYVSMDGGKKFNFDKSANNFPGNLYSVRFFKEYNNMGWALGSNGMLLRY 400          
BLAST of mRNA_H-paniculata_contig4854.11975.1 vs. uniprot
Match: A0A7S1FY02_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FY02_9STRA)

HSP 1 Score: 421 bits (1082), Expect = 1.670e-142
Identity = 228/425 (53.65%), Postives = 288/425 (67.76%), Query Frame = 0
Query:    1 MATAPLASACIVLILNGAGAFVPSLHGTLTQSSRQTVRIASEVHSISRRPMSVSMSVDVSKSRIGFLEDSATVSMAAGALVLGTSTGLASPAEAAQVSAWEQISLPVASVLYDIAFDPVVPDHGLVVGAQGTFLETFDGGNKWGVRTFGNLDEEEEINYRFQKVSMFKDEIFIVGKPPILLHSKDSGKSWERVPLSPKLPGEPSNIVALGDGKAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAEDGSYLAVSSRGNFYLTWQPGQDFWIPHNRGTSRRIQNMGFVKESAADGLWMTLNGGAMALSTQPPEGTTDPVFG--DVAIKSGGYGIIDVAWKDEKEVWAVGGGGSLWYSTDSGKSFKFSSGANNIGANLYDVKFFG--GDKGFVIGSDGVLLKY 421
            +AT PL+     L+L+   AFVPS      QSS                       V ++ +R  F+ +SA+      A V+ T++    PA AA    W  I +P A  LYDI FD   P HG +VGA+GTF ET DGGN W  R+F NLD EEE+ YRFQ+VS    E +++GKP +LLH+KD+GKSWER+PLSPKLPG+P+ I+ALG  +AEMTT+SGAIY T+NAG NW AQVKET+DATLNR+SSSGVSGASYFTG+I+  TR   GSYLAVSSRGNF+LTW+ G DFWIPHNRGT RRIQ MGFV +S   GLWMTLNGG + +S  P +   +  +G  +  IK+GGYGI DVAW+ + EVWAVGG  +++ S D+GK+F F S AN I  NLY++KFF   G+ G+ +GS+G+LLKY
Sbjct:    5 LATLPLS-----LLLSNTAAFVPSSSSKCRQSSSL---------------------VQMANNRRTFVTESAST-----AAVVATASSFPLPASAASTKMWTPIEVPFADTLYDIDFDS--PTHGYLVGARGTFAETNDGGNTWEPRSFSNLDAEEEVTYRFQQVSFVDGEGWVLGKPTLLLHTKDAGKSWERIPLSPKLPGDPAKILALGPNRAEMTTTSGAIYITENAGRNWKAQVKETIDATLNRVSSSGVSGASYFTGNILQPTRDSSGSYLAVSSRGNFFLTWEKGGDFWIPHNRGTPRRIQAMGFVGDSIKKGLWMTLNGGKLLVSP-PLDAVNEDEYGFTEANIKTGGYGITDVAWRTDDEVWAVGGSNTMYRSVDNGKNFAFDSSANKIPGNLYNLKFFKEFGNMGWALGSNGILLKY 395          
BLAST of mRNA_H-paniculata_contig4854.11975.1 vs. uniprot
Match: A0A7S4WJL8_9STRA (Hypothetical protein n=4 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S4WJL8_9STRA)

HSP 1 Score: 416 bits (1070), Expect = 3.830e-140
Identity = 206/331 (62.24%), Postives = 250/331 (75.53%), Query Frame = 0
Query:   94 AAQVSAWEQISLPVASVLYDIAFDPVVPDHGLVVGAQGTFLETFDGGNKWGVRTFGNLDEEEEINYRFQKVSMFKDEIFIVGKPPILLHSKDSGKSWERVPLSPKLPGEPSNIVALGDGKAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAEDGSYLAVSSRGNFYLTWQPGQDFWIPHNRGTSRRIQNMGFVKESAADGLWMTLNGGAMALSTQPPEGTTDPV-FGDVAIKSGGYGIIDVAWKDEKEVWAVGGGGSLWYSTDSGKSFKFSSGANNIGANLYDVKFFG--GDKGFVIGSDGVLLKY 421
            AA    W Q+SLP    LYDI FD   P HG +VGA+G F ET DGG  W  R+F NLD EEE+ YRFQ VS    E +++GKP ++LH+KD+GK+WER+PLSPKLPGEP++++ALG  KAEMTTSSGA+Y T NAG NW AQVKET+DATLNRISSSGVSGASYFTGSII   R +DG+YLAVSSRGNF+LTW+PGQDFWIPHNRGT RRIQNMGFV+     GLWMTLNGG + +S   P  ++D   F +  IK+GGYGI DVAW+   EVWAVGG  +++ STD+GK+F F   AN+I  NLY+VKFF    + G+ +GS G+LL+Y
Sbjct:  104 AAASKMWTQVSLPFEDTLYDIDFDS--PTHGYLVGARGAFAETNDGGQTWEARSFSNLDAEEEVTYRFQVVSFKDGEGWVLGKPTLMLHTKDAGKTWERIPLSPKLPGEPTSVLALGPSKAEMTTSSGAVYVTDNAGRNWKAQVKETIDATLNRISSSGVSGASYFTGSIINQVRDDDGAYLAVSSRGNFFLTWEPGQDFWIPHNRGTPRRIQNMGFVEGDIHKGLWMTLNGGKLFVSPTDPNLSSDSFEFNEANIKTGGYGITDVAWRTANEVWAVGGSNTMYVSTDNGKNFSFDKSANSIPGNLYNVKFFKEYDNMGWALGSSGLLLRY 432          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4854.11975.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCC9_9PHAE3.940e-23178.69PSII_BNR domain-containing protein n=2 Tax=Ectocar... [more]
A0A836CNS8_9STRA3.980e-17167.83Photosynthesis system II assembly factor YCF48-dom... [more]
A0A7S3XNC3_HETAK8.870e-15666.77Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XVG6_9STRA6.350e-15559.31Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9U3Z4_9STRA8.830e-14955.69Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2S971_9STRA1.420e-14866.87Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2UBA7_9STRA1.770e-14458.40Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2SCF7_9STRA1.390e-14260.62Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S1FY02_9STRA1.670e-14253.65Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S4WJL8_9STRA3.830e-14062.24Hypothetical protein n=4 Tax=Lithodesmiaceae TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028203Photosynthesis system II assembly factor Ycf48/Hcf136-like domainPFAMPF14870PSII_BNRcoord: 93..421
e-value: 2.5E-123
score: 411.2
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 93..386
e-value: 1.0E-6
score: 29.9
NoneNo IPR availablePANTHERPTHR47199FAMILY NOT NAMEDcoord: 42..422
NoneNo IPR availablePANTHERPTHR47199:SF2PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTICcoord: 42..422
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..426
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.701
NoneNo IPR availableSUPERFAMILY110296Oligoxyloglucan reducing end-specific cellobiohydrolasecoord: 99..423

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4854contigH-paniculata_contig4854:3322..8314 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4854.11975.1mRNA_H-paniculata_contig4854.11975.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4854 3226..8995 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4854.11975.1 ID=prot_H-paniculata_contig4854.11975.1|Name=mRNA_H-paniculata_contig4854.11975.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=427bp
MATAPLASACIVLILNGAGAFVPSLHGTLTQSSRQTVRIASEVHSISRRP
MSVSMSVDVSKSRIGFLEDSATVSMAAGALVLGTSTGLASPAEAAQVSAW
EQISLPVASVLYDIAFDPVVPDHGLVVGAQGTFLETFDGGNKWGVRTFGN
LDEEEEINYRFQKVSMFKDEIFIVGKPPILLHSKDSGKSWERVPLSPKLP
GEPSNIVALGDGKAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISS
SGVSGASYFTGSIIGTTRAEDGSYLAVSSRGNFYLTWQPGQDFWIPHNRG
TSRRIQNMGFVKESAADGLWMTLNGGAMALSTQPPEGTTDPVFGDVAIKS
GGYGIIDVAWKDEKEVWAVGGGGSLWYSTDSGKSFKFSSGANNIGANLYD
VKFFGGDKGFVIGSDGVLLKYIPDQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028203PSII_CF48-like_dom
IPR015943WD40/YVTN_repeat-like_dom_sf