mRNA_H-paniculata_contig11868.1198.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11868.1198.1 vs. uniprot
Match: D8LJJ1_ECTSI (Sir2-type regulatory transcription factor silent information regulator protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJJ1_ECTSI) HSP 1 Score: 104 bits (260), Expect = 6.120e-24 Identity = 55/77 (71.43%), Postives = 65/77 (84.42%), Query Frame = 3 Query: 3 IPPPRVQETYRMVDESELVMVAGSSLQVYSAFRLVDRAAKAGKPIAVINQGDTRAETSGIQILKVESGVSTVLPLLL 233 IP RV++TYR+VDESEL++ AGSSLQVYSA+RLV RAA AGK + VIN G+TRAE SG+ ILKVE+GVS VLP LL Sbjct: 422 IPRQRVEDTYRIVDESELLIAAGSSLQVYSAYRLVKRAADAGKKVVVINLGETRAERSGLDILKVEAGVSNVLPKLL 498
BLAST of mRNA_H-paniculata_contig11868.1198.1 vs. uniprot
Match: A0A835YXH7_9STRA (NAD-dependent protein deacylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXH7_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.120e-14 Identity = 38/73 (52.05%), Postives = 54/73 (73.97%), Query Frame = 3 Query: 3 IPPPRVQETYRMVDESELVMVAGSSLQVYSAFRLVDRAAKAGKPIAVINQGDTRAETSGIQILKVESGVSTVL 221 +P RV++ + MV ++ ++V GSSL VYS FR V+ A K GKP+A++NQG TRAE +G+ ILK+E+G S VL Sbjct: 215 VPQARVRQCFDMVAAADGLLVVGSSLAVYSGFRFVEAAVKQGKPVAILNQGPTRAEKAGLPILKLEAGCSAVL 287
BLAST of mRNA_H-paniculata_contig11868.1198.1 vs. uniprot
Match: A0A4D9DDW2_9STRA (Deacetylase sirtuin-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DDW2_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 1.530e-13 Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = 3 Query: 3 IPPPRVQETYRMVDESELVMVAGSSLQVYSAFRLVDRAAKAGKPIAVINQGDTRAETSGIQILKVESGVSTVL 221 +P VQE + VD ++ V+VAG+SL VYS++R V +AK GKPI V+NQG TRAE G+ LK+E G VL Sbjct: 135 VPSAVVQEAFAAVDAADAVLVAGTSLMVYSSWRFVLDSAKKGKPILVVNQGQTRAEREGVPHLKIEKGCGEVL 207
BLAST of mRNA_H-paniculata_contig11868.1198.1 vs. uniprot
Match: W7TT51_9STRA (Nad-dependent deacetylase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TT51_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 2.080e-13 Identity = 39/73 (53.42%), Postives = 50/73 (68.49%), Query Frame = 3 Query: 3 IPPPRVQETYRMVDESELVMVAGSSLQVYSAFRLVDRAAKAGKPIAVINQGDTRAETSGIQILKVESGVSTVL 221 +P VQE + VD ++ V+VAG+SL VYS++R V AAK GKPI V+NQG TRAE G+ LK+E G VL Sbjct: 264 VPSAVVQEAFAAVDAADAVLVAGTSLMVYSSWRFVLDAAKKGKPILVVNQGQTRAEREGVPHLKIEKGCGEVL 336
BLAST of mRNA_H-paniculata_contig11868.1198.1 vs. uniprot
Match: A0A7I7ZMQ7_9MYCO (NAD-dependent protein deacetylase n=15 Tax=Mycolicibacterium TaxID=1866885 RepID=A0A7I7ZMQ7_9MYCO) HSP 1 Score: 73.2 bits (178), Expect = 4.820e-13 Identity = 37/76 (48.68%), Postives = 54/76 (71.05%), Query Frame = 3 Query: 3 IPPPRVQETYRMVDESELVMVAGSSLQVYSAFRLVDRAAKAGKPIAVINQGDTRAETSGIQILKVESGVSTVLPLL 230 +P RVQ+ Y +VD ++ ++VAGSSL VYS +R V AA AGKP+A+IN+G TR + + +K++SG S +L LL Sbjct: 205 VPKDRVQQAYALVDAADALVVAGSSLTVYSGYRFVRHAAAAGKPVAIINRGPTRGDD--LATVKIDSGCSEILALL 278
BLAST of mRNA_H-paniculata_contig11868.1198.1 vs. uniprot
Match: UPI000623E9D7 (NAD-dependent protein deacetylase n=1 Tax=Allosalinactinospora lopnorensis TaxID=1352348 RepID=UPI000623E9D7) HSP 1 Score: 72.8 bits (177), Expect = 5.890e-13 Identity = 37/77 (48.05%), Postives = 54/77 (70.13%), Query Frame = 3 Query: 3 IPPPRVQETYRMVDESELVMVAGSSLQVYSAFRLVDRAAKAGKPIAVINQGDTRAETSGIQILKVESGVSTVLPLLL 233 +P RV+E+YR+VDE+E ++VAGSSL V S R V AA+ GKP+ ++N+G+TR + + LKVE G S +L L+ Sbjct: 199 VPKDRVRESYRIVDEAESLLVAGSSLTVMSGLRFVKHAARQGKPVVILNRGETRGNS--VATLKVEGGCSPILRALI 273
BLAST of mRNA_H-paniculata_contig11868.1198.1 vs. uniprot
Match: A0A2S9G1L2_9MYCO (NAD-dependent deacetylase (Fragment) n=2 Tax=Mycobacterium sp. ITM-2017-0098 TaxID=2099692 RepID=A0A2S9G1L2_9MYCO) HSP 1 Score: 68.2 bits (165), Expect = 9.400e-13 Identity = 35/76 (46.05%), Postives = 53/76 (69.74%), Query Frame = 3 Query: 3 IPPPRVQETYRMVDESELVMVAGSSLQVYSAFRLVDRAAKAGKPIAVINQGDTRAETSGIQILKVESGVSTVLPLL 230 +P RV++ Y +VDE++ ++VAGSSL VYS +R V AA AG PIA+IN+G TR + + + +++G S +L LL Sbjct: 7 VPKERVEQAYSLVDEADALLVAGSSLTVYSGYRFVRPAAAAGMPIAIINRGQTRGDD--LATVTIDTGCSPMLTLL 80
BLAST of mRNA_H-paniculata_contig11868.1198.1 vs. uniprot
Match: A0A2S8MCC2_9MYCO (NAD-dependent deacetylase (Fragment) n=1 Tax=Mycobacterium sp. ITM-2016-00317 TaxID=2099694 RepID=A0A2S8MCC2_9MYCO) HSP 1 Score: 69.7 bits (169), Expect = 1.080e-12 Identity = 36/76 (47.37%), Postives = 54/76 (71.05%), Query Frame = 3 Query: 3 IPPPRVQETYRMVDESELVMVAGSSLQVYSAFRLVDRAAKAGKPIAVINQGDTRAETSGIQILKVESGVSTVLPLL 230 +P RV++ Y +VDE++ ++VAGSSL VYS +R V AA AG PIA+IN+G TR + + +K+++G S +L LL Sbjct: 62 VPKERVEQAYSLVDEADALLVAGSSLTVYSGYRFVRHAAAAGMPIAIINRGRTRGDD--LADVKIDNGCSPMLALL 135
BLAST of mRNA_H-paniculata_contig11868.1198.1 vs. uniprot
Match: A0A7K1JMA0_9MYCO (NAD-dependent protein deacetylase n=4 Tax=Mycolicibacterium TaxID=1866885 RepID=A0A7K1JMA0_9MYCO) HSP 1 Score: 71.6 bits (174), Expect = 1.610e-12 Identity = 35/76 (46.05%), Postives = 54/76 (71.05%), Query Frame = 3 Query: 3 IPPPRVQETYRMVDESELVMVAGSSLQVYSAFRLVDRAAKAGKPIAVINQGDTRAETSGIQILKVESGVSTVLPLL 230 +P RVQ+ Y +VD ++ ++VAGSSL V+S +R V AA AGKP+A+IN+G TR + + +K++SG S +L +L Sbjct: 194 VPKDRVQQAYSLVDNADALLVAGSSLTVFSGYRFVRHAAAAGKPVAIINRGPTRGDE--LATVKIDSGCSEILAML 267
BLAST of mRNA_H-paniculata_contig11868.1198.1 vs. uniprot
Match: A0A5N5UNC5_MYCPH (NAD-dependent protein deacetylase n=3 Tax=Mycolicibacterium phlei TaxID=1771 RepID=A0A5N5UNC5_MYCPH) HSP 1 Score: 71.2 bits (173), Expect = 2.130e-12 Identity = 38/76 (50.00%), Postives = 53/76 (69.74%), Query Frame = 3 Query: 3 IPPPRVQETYRMVDESELVMVAGSSLQVYSAFRLVDRAAKAGKPIAVINQGDTRAETSGIQILKVESGVSTVLPLL 230 +P RV + Y MVDE++ ++VAGSSL VYS +R V AA AG PIA+IN+G TR + + +KV++G S +L LL Sbjct: 193 VPKERVAQAYSMVDEADALLVAGSSLTVYSGYRFVRHAAAAGMPIAIINRGPTRGDE--LATVKVDAGCSPMLALL 266 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11868.1198.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11868.1198.1 >prot_H-paniculata_contig11868.1198.1 ID=prot_H-paniculata_contig11868.1198.1|Name=mRNA_H-paniculata_contig11868.1198.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=108bp TYLPRGFRRLTAWWTSRSWSWSPDRPSRYTRPFGLWIAPQRRESRSRLSTback to top mRNA from alignment at H-paniculata_contig11868:3098..7126- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11868.1198.1 ID=mRNA_H-paniculata_contig11868.1198.1|Name=mRNA_H-paniculata_contig11868.1198.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4029bp|location=Sequence derived from alignment at H-paniculata_contig11868:3098..7126- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11868:3098..7126- >mRNA_H-paniculata_contig11868.1198.1 ID=mRNA_H-paniculata_contig11868.1198.1|Name=mRNA_H-paniculata_contig11868.1198.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=648bp|location=Sequence derived from alignment at H-paniculata_contig11868:3098..7126- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |