prot_H-paniculata_contig4843.11959.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4843.11959.1
Unique Nameprot_H-paniculata_contig4843.11959.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length945
Homology
BLAST of mRNA_H-paniculata_contig4843.11959.1 vs. uniprot
Match: D7FPM4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPM4_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 3.130e-14
Identity = 123/442 (27.83%), Postives = 161/442 (36.43%), Query Frame = 0
Query:  215 LYTLILQAAEPKDWRKASDLVNGIFEEDFGFEPG-PHHRAMAAILCWRAGASSRAARHLDDMGGIEGVL--------------------------AARYPLHLLPSSKPSTQVDTCRSLLTAMDIYGRAGRWAKVAEAFSAL-----------------------------------------------------ANSKPPADSPVGAANG----------SASAADSAVAVDLLSAHHSTPLAFAVTAYLKLGHVNVAAAALSIMRATLSSDGAAMGAMRSVVAPRRSPGVTMGTEPGKGQNGGDHEAESRAVEKQTLLDGVGGDNTEEELVYMGRHPDVAWINSTVRAFVRKERWDLAAAVLSPEICEWACIDLVV---LGEVGQPSSNCAASEDVRGEREKLRQSLGPFLEKKATVKRLANGTVEGAKACIRALEMAVG 563
            L  L+L      + RK S LV+      FG +   P   A+AA+  WR G  + AARHLD+M      L                          AA   +   PS  P  Q       L A+DIYGRA RWA  AEAF A                                                      A    P   P+    G           A    S + +    + H + +A A+TAYLKLG V  AA  LS ++A++ + GA      +  A   SPG   G+E G G  G       RA    +L     G  T           D  W+  TVR F R  +WD+A  VLS +I  W   +       G+ G  +   AASE           SL  FLE K   K+ A+G V G+KAC+  L++A G
Sbjct:  244 LMALVLSKVPVGNSRKISRLVSNKGSRAFGLQASTPDMLAVAAVAHWREGVVTGAARHLDEMFARIKKLNKEMVASPSSLVQEWLAADRQRIRDAAAAAAVETPPSHPPERQWPW---RLVAVDIYGRANRWAAAAEAFDAFIGDMGFPSSRNGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHVSARIAKPTRLPLPEEFGXXXXXXXXXXKAGEFSSPLPLQAWLSFHPSAIAHAITAYLKLGRVEEAAEVLSFLKASVRAGGA------TPAAGGLSPGYVGGSEEGGGYGG-------RAGSDPSLS----GPPTV----------DPGWMEGTVRGFTRAGKWDMALEVLSTDIVAWFSAETGGDRRSGDGGGGARLVAASE-----------SLEAFLEAKLXAKKPASGQVAGSKACLELLKVAAG 644          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4843.11959.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FPM4_ECTSI3.130e-1427.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4843contigH-paniculata_contig4843:7001..13077 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4843.11959.1mRNA_H-paniculata_contig4843.11959.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4843 6481..13115 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4843.11959.1 ID=prot_H-paniculata_contig4843.11959.1|Name=mRNA_H-paniculata_contig4843.11959.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=945bp
MLRCRSKIRRATIVPGIFESLVRSRCLGTGGNALRAPTADRSITSERIGA
RKTNRSSSSRRTGVKAFAGEPRQRPTSASRAVGAKAVAREEIAGKDAGWK
SMAERFQDLLNREENSWFDGDAKHFASVATDMSRQARKGFYKHIVRAAAK
LVTADLFGPTSLDHFAKRSLFPAWSKFSETDVSQLCVRRCSQIVREMLNS
SSLRESDLKISRMFLYTLILQAAEPKDWRKASDLVNGIFEEDFGFEPGPH
HRAMAAILCWRAGASSRAARHLDDMGGIEGVLAARYPLHLLPSSKPSTQV
DTCRSLLTAMDIYGRAGRWAKVAEAFSALANSKPPADSPVGAANGSASAA
DSAVAVDLLSAHHSTPLAFAVTAYLKLGHVNVAAAALSIMRATLSSDGAA
MGAMRSVVAPRRSPGVTMGTEPGKGQNGGDHEAESRAVEKQTLLDGVGGD
NTEEELVYMGRHPDVAWINSTVRAFVRKERWDLAAAVLSPEICEWACIDL
VVLGEVGQPSSNCAASEDVRGEREKLRQSLGPFLEKKATVKRLANGTVEG
AKACIRALEMAVGTMSTRGPASPFGTAESVVAGAEVSEDAGQDLSFKYPS
EAGLDTATGESGKARTRTELVSAEALRWLASSKIQRETSGIAEEASNTTS
SEQLDLLNSLPPSLPADFTKTINSPDRVADELLRSRAACLPTEVILTAVR
RAWASDLCRADEEVHDVGKWAALALYEAGVGAGKLSVGVQWASAAAGVVD
LSGGNFSKNQAVGICALHVALKDMLWQYAYEEEIGRHVHNPCTDLIVIVD
VTVSSSAVSSARNILWLLSSAFSRFENGALNPPELVGLGARNMKKMASKP
LLKMKQITERPHSTGVVLCLPRLQLQRWLLAEGRAWRGDRGKLWSPPWLE
FEVDAPPLLPVHFELEAVTNSNGGINHSGSDRFESNASSTSVWS*
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