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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 573 |
| Cds size | 441 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4832.11942.1 >prot_H-paniculata_contig4832.11942.1 ID=prot_H-paniculata_contig4832.11942.1|Name=mRNA_H-paniculata_contig4832.11942.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=147bp
MFRSLDSQNECQDYKCPHRWSPLKDYKDKKCYDGCERDDCCEKMDDEKCD
DYKCPNGWRWMKDYKGKKCYEECDQDECCEKERDDGKCDDYECPDGWTWM
KDYKGKKCYEECDQDDCCEKERDDEKCDDYECPDGWMWTKDYKGKKC back to topmRNA from alignment at H-paniculata_contig4832:2063..9798- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig4832.11942.1 ID=mRNA_H-paniculata_contig4832.11942.1|Name=mRNA_H-paniculata_contig4832.11942.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7736bp|location=Sequence derived from alignment at H-paniculata_contig4832:2063..9798- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGTTTGTGCACGTAGGTCATGTCTTGTGTCTTCAACACGCATTGTTTTCA
TGTACGCTTGACCTTGTCTAGGCACTGCAGCGGTGGTTGCGAAGGACAGT
ACCAGCAAACAGGGCTGGGGCCTTCGCGGGATGTTCCGCAGCCTTGACAG
CCAAAACGAGGTAATGATATAATGTTGCACACGTGACCAGAGGCTACCTT
GTTGCGGGTATTGCGACGTCCACGCTGTGATGAGGTTGGCAACATATTAG
GACGTTGTGGTGAGGTCCTAAGACGTTTTATACACATTGCCAACCTCACC
GCAATGTGGGATATTGTAATATCCGCAGCGAGGTACCCACAATGTACCCC
CTGGCCACATGTGTGTTTATTGGGTTTGGGCGTAGAAAACATATGCGCTG
ACGCTGATATAGCGTCACTGTTGACTGCACACGTGGCCAGAGAGATACCT
TGTTGCGGATATTGCAATGTCCACGCTGTGGTGAGGTTAACAATGTGTAC
ACGCCATGATACGTTTCAAGGATATTGTCAACCTCCTGCAAGGTGGGAAC
GTCGTTATGTCGGCAACAAGGTGCTCACAAGGTACCCTCTGGTCACGGGT
GTGAATTCGTCAGCACTCAGCACAATGTTTCGGAACAGTATCTTCACTTT
GGTGAATTCTAGTTTTCCGAACTATTGGCGAGAATATATGCTACAAGATG
GCCTCATAGGTAAGTCAAACTAGTCCTGGTTTGGATTCTCATGAATACCA
ACATGATTCAGCGCGCGAGTTCAGGATAATGTCGCATATTCTGACCAAAA
CTATTCCTTGTCAGGCAACTGGCAAATTCCCATCTTCACCTTTGGTATTC
TTTTACTTACGTTAAGTATATGAAACTGAGGAAAACTCAGGATGCAACCA
GAGGCGTGTGAAGAGTGGAAGGTGTTAGATCGTATTTTTCTTCGCTCTAG
TCCTGAGCCGCGTGATAGATGGACGGATGACACACACATAACACGCATGC
ACATGTGCTATAATCATAGTCAGATGATCAGTCCCCGTAGTTCCGTGAAT
CCCAGTGAACCCACTGTCGTTACGGTTGTTACCGACCGTAACCTGCCTGG
TGGTACGTACTATCTCTGACCCACAATGTAAGGGGCGTTTGACGTGCGCA
CAATACCAGGGTCGTATACGCGTTGGCGAGTTGGAGATAATGCCCCGACG
ACCAAACCACCGAAATGTGTCTGCACACGAGTAAGAGGGGTGCTCACACA
AAAACACAATGGTTTCAACCCGGAGTTGCGCGGATATTATCCCCGGAGCT
AATCCGGGTTTGAAGTCGCCCTTGCGGAGAACCCCTCGGTTGCTGTGTTT
CACCGGCATCCTCATTCGGAGACATGGCCAACAGGTAATATTGAAATCGC
CAAAAAGTAGATTTCCACCTGGAGGTCAGTTTGCCCCTCTAAATACGGGT
GTCATATAATGATACCTTAAGGGCATATATCGCTACATACTCTGCTGTCG
ATATGTAAGGTTGATACGTGACCGTGTGGTAAATGAAACACACAATGAAC
TAGAAGATCTGAGTCTTGTTCTGACAGTTGTCACCGACGTGTGCGTATAC
GAGCAGTGCCAGGACTACAAGTGCCCACACCGTTGGAGCCCGCTGAAGGA
CTACAAGGACAAAAAATGCTACGATGGGTGCGAGAGAGATGACTGCTGTG
AGAAGATGGGTAAGTGCTGCGAGAATAAAGTTTGGGTGTGACTCCCTCAA
ACCAAAGGTGTCTCGTAACCGCTCTGAGTTGTCCAGCCGTTGTGAAAAGA
TCAGCTTGTTCGGTGGACGGTGTGAATCCCATCGAGCCAGTTGGACACTG
AAATATCAAGTATCCGCATGATGTCTGCCGGCGTGACCCGGACATTATAC
GTGGCCGCATCCCTACAGACGACGAGAAGTGCGACGACTACAAGTGCCCC
AACGGCTGGAGGTGGATGAAGGACTACAAGGGCAAGAAGTGCTACGAGGA
GTGCGACCAGGACGAATGTTGCGAGAAGGAAAGGGGTGAGTTGGGTGTGA
TTATTGGTCGGCGACTGTTGAGGATGGAGATGAAGACTGTATCTGGGCGT
ATACCTCGAGAGGTATGGAGCTGTGGTTTGAATCAACGTTCTTCCCTTAT
TCAGTCGCATTAACTATATGTTGTGGAAACTCGGCGTAATACCACCAGGA
TCTTTTGCTGTAGATTCGATGAGTCGCATGGTTGATCTATTCGTACACTG
CGATATCAAGTGTCCGTACGATATCTACGGGTGTTACCGGTGTCGTCGTG
TGTGGGTGCATCTCCACAGACGACGGGAAGTGCGACGACTACGAGTGCCC
CGACGGCTGGACGTGGATGAAGGACTACAAGGGCAAGAAGTGCTACGAAG
AGTGCGACCAGGACGATTGTTGCGAGAAGGAAAGGGGTGAGTTGGGTGTG
ATTATTGGTCGGCGACTGTTGAGGATGGAGATGAAGACTGTATCTGGGCA
TATACGTCGAGAAGCAGGCAGCTGGTGGGTTTCGCTATTTTTGTCGGCTG
CATTGGTGTATTCTTGTTCAAGGCACCGTCATACGGTCAGTTTGTTCTGC
GGTACATGCCGTAAAACGTTCGAGTGGTCTAGTCGTACACTGCAACGTGA
AGGTTATCATGAAATCCACAGCCGTCGCGAAGTGACGTCGCATGTGGCCT
TATCCCGACAGACGACGAGAAGTGCGACGACTACGAGTGCCCCGACGGCT
GGAGGTGGATGAAGGACTACAAGGGCAAGAAGTGCTATGAGGGATGCAAC
AAGGACGAATGTTGCGAGAAGGAAAGGGGTGAGTTGGGTGTAATTGTTCG
TCGGCGACTGAGGGGGATGAAAACTTCATTGGGGCGTATGCGTCGAGAGG
CAGGGAACTGTGGTTTGGATCGTCGCTCTTCCTTTATTCAGCCGCATCGA
CTATATGTTGTGAAACGTTGGCGTATTACCAACAGGGTGTTTGGCTATAA
TTTCGAGGAGTCGCATGGTTGGTCTATTCGTAGACTGCAATATCAAGTAT
CCGTATGTTCTACCGGTTGGACCGGTGTCGTCGTACGTGGCCGCATTTCC
ACAGACGACGAGAAGTGCGACGACTACGAGTGCCCCGACGGCTGGAGGTG
GACGAAGGCCTACAAGGGCAAGAAGTGCTACGAGGAGTGCGACAAAGACG
AATGTTGCGAGAAGGAGAGGGGTGAGCGCGGCGCGATGAGGTGTAGACGG
CGGTATACGGTACCATATGCATCGCTGCGCGTAGGTCGAGAAGCACGGAA
CTAAGCTTTGTTCTAAAACTCTCACGCCGTTGAGTGGCATCGAAATTGTC
TTGCCGAAAATTCCAGTAGTAGGATCAATTGCTTTTCCGGTAAATACTGT
GAATGCCGTGGTTGGTCCAGTCGCACGCTACCAGATGAAGTGTTCGAATG
ATGTCTATCGGTTGTACTGGGGCGCATTTCTTCAGACGACGAAAAGTGCG
ACGACTACGAGTGCCCCGACGGCTGGCGGTGGATGAAGGACTACAAGGGC
AAGAAGTGCTACGAGGAGTGCGACAAGGACGAATGTTGCGAGAAGGAACG
GGGTGAGCTGGGTGGGAGTATGTGTCGGCGGTTGTGCGGATAAACAGTTT
ATCGGGGCCCATATGACCAGAAGCAGGTAGCTGAGGTTTGGTTCATCATT
TTGTTTATTAGCGGCATTGGTTTCTCTCTGTGAAAGACGCCGTCATACAA
TCGATTTGTTCTGCGGTTTATGCGCTAAAACACATGTTTGGTCTCGTCGT
ACACTGCAACGTCAAGGTTCTTACGATATCTACCCCTGTAACGACGTGAC
GTTGCATGTGGCGTTGTCCATACAGACGACGAGAAGTGCGACGACTACGA
GTGCCCCGACGGCTGGAGGTGGACGAAGGACTACAAGGGCAAGAAGTGCT
ACGAGGAGTGCGACAAAGACGACTGCTGCGAGAAGGAAAGGGGTGAGTTT
GGTGGGACTATGTGTCGGCGGCTGTGCGAATAAACACTTTACCGGGGCCC
ATATGACCAGAAGCAGGCAGTTGAGGTTTGGGTCATAATTTTGTTTCTCA
GCGGCATTGGTTTCTCTCCGTGAAAGACGCCGTCGTACAACCGGTTTGTG
TTGCGGTTTATGCGCTAAAACACATTTTTGTTGTAGTCGTACACTGCAAC
GTGAAGGTTCTTACGAGATCTACCCCTGTAACGACGTGACGTCGCATGTG
GCGTTATCCATACAGACGATGAGAAGTGCGACGACTACAAGTGCCCCGAC
GGCTGGAGGTGGATGAAGGACTACAAGGGCAAGAAGTGCTACGAGGAGTG
CGACAAGGACGAATGTTGCGAGAAGGAAAGGGGTGAGTTGGGTGTAATTG
TTCGTCGGCGACTGAGGGGGATGAAAACTACATTGGGGCGTATGCGTCGA
GAAGCAGACAGCCGACATTTGGACGAAAGCTTCCATTTCATCCACTCGCA
TCGACTTCAGGTTGTGGAAATTCGGCGAAATATCACCACGATCGTTTGCC
GTAGATTCGAGGAGTCGCATGGTTGGTCTATTCGTACACTGCAATGTCGA
GTGTCCGTGCGATATCTACGAACGTGATCGGTGTCATCGTACGTGACCTT
ATCTCCGCAGACGACGAAAAGTGCGACGACTACGAGTGCCCCGATGGCTG
GAGGTGGACGAAGGACTACAGGGGCAAGAAGTGCTACGAGGGGTGCGACA
AGGACGAATGTTGCGAGAAGGAAAGGGGTGAGTTGGGTGTGATTATTCGT
CCGCGGTTGCGGGGGATGAAAACGGTATCGGGGCTCATACGACCAGAAAC
AGGTAGCGGAGGTTAAAATTAACGCTGCTCCCTTGTTTTATCGCATCGAT
TATGTGCTGTGGAAAGTCGGCGTAACACCACTAGGATCGTTTGCTGTAGG
TTCGAGGAGTCGCACGGGTGGTCTAGTCGTACACTGCAATGTCGAGTATC
CGTACGATACCTACGAGCGTGACTGGTGTCGTGTGTGGGCGCGTCTCTAC
AGACGACGAAAAGTGCGACGACTACAAGTGCCCCGACGGCTGGAGGTGGA
TGGACGACTACAAGGGCAAGAAGTGCTACGAGGAGTGCGACAAGGAAGAA
TGCTGCGAGAAGGAAAGGGGTGAGTTGGGTGTGATTACTCGTCGGCGGCT
GTTGCAGATAAACATTTTATCGGGGCCCGTATGACCAGAAGCAGGTAGCT
GAGGTTTGGGTCATCGTTTTTTTTCTCAGCGGCATTGGTTTCTCTCTGTG
AAAGTCGCCGTCATACAATCGATTTGTTGTGCGCATTTATGCGCTAAAAC
GCATAGTTGGTCTAGTCGTACACTGCAACGTCAAGGTCCTTACGAGATAT
ACCCCGGTAACGAGGTGACGTCGCATGTGGCCTTATCCCGACAGACGACG
AGAAGTGCGACGACTACAAGTGCCCCGACGGCTGGAGGTGGACGAAGGAC
TACAAGGGCAAGAAGTGCTACGAGGAGTGCGACAAGGACGAATGTTGCGA
GAAGGAGAGGGGTGAGTTGGGTGTGATTATTCGTCGGCGACTGAGGGGGA
TGAAAACTTCATTGGGGCATATGCGTCGAGAGGCAGGGAACTGTGGTTCG
GATTATCCCCCTTCCTTTATTCAGCCGCATCGACTATATGTTGTGGAAAG
TTGGCGTAATACCAACAGGGTGTTTGGCTATAAGTTCGATGAGTCGCATG
GTTGGTCTATTCGTAGACTGCAATATCAAGTATCCGTATGTTCTACCGGT
TGGACCGGTGTCGTCGTACGTGACCTTATCCCGACAGACGACGAGAAGTG
CGACGACTACGAGTGCCCCGACGGCTGGAGGTGGACGAAGGACTACAAGG
GCAAGAAGTGCTATGAAGGATGCGACACAGACGAATGTTGCGAGAAGGAA
AGGGGTGAGTGCGCCGCGATGGGATGTCGCTGGTAGCAGGGTGTGAAACG
TTTGTCGCGGTGCATACGTCGAGAAAACGAAAAGAACGGTTCACCCCACA
ACACTCTCTGTATTCAGCAGCGTCGATACTGTGGTTTCGAAACTCGCCGT
CGAATAATCAATTTCGTTTTCGGTGATTGCTGTGGGAGGCATTTTTGGTC
CAGTCGTAGACTGTAATATGGAGTATCCGTATGGTCTACCGACGTGACCC
AGGACATTATGTGTTTCTGTATCCCTACAGACGACGAGAAGTGCGACGAC
TACGAGTGCCCCGACGGCTGGATGTGGAGGAAGGACTACAAGGGCAAGAA
GTGCTACGAGGAGTGCGACAAGGACGAATGTTGCGAGAAGGAGAGGGGTG
AGCGCGGCGCGATAAGGTGTAGACGGCGGTATACGATACCACATGCATCG
CTGCGCGTAGGTCGAGAAGCACGGAACTAAGCTTTGTTCTAAACCTCTCA
CGCCGTTGAGTGGCATCGAAATTGTCTTGCCGAAAATTCCAGTAGTAGGA
TCAATTGCTTTTCCGGTAAATACTGTGAATGCCGTGGTTGGTCCAGTCGC
ACGCTACCAGATGAAGTGTTCGAATGATGTCTATCGGTTGTACTGGGGCG
CATTTCTTCAGACGACGAAAAGTGCGACGACTACAAGTGCCCCGACGGCT
GGCGCTGGATGAAGGACTACAAGGGCAAGAAGTGCTACGAGGAGTGCGAC
AAGGACGAATGTTGCGAGAAGGAACGGGGTGAGTTGGGTGTGATTACTCG
TCGGCGACTGTTGAGGATGAAAACTGCATGTGGGCGTATGCGTCGAGAGG
CAGGGAGGTGAAGTTTGGGTTATCGCTCTCACGTTATGCAGCCACATTGA
TTGGTATCGTACGTTGCCTCATCTCCACAGGCGACGAGAAGTGCGACGAC
TTCGAGTGCCCGGATGGCTGGAGGTGGACAAAGGACTACAAGGGCAAGAA
GTGCTACGAGGGGTGCGACAAGGATGAATGTTGCGAGAAGGAGAGGGGTG
AGTGCACCGCGATGGGATGACGCTGGCAGCAGGGTGTGAAACGTTGTCGC
GGTGCGTACGTCGAGAAAACGGAAGGAATGATTCACCCTACAACACTCTG
TATTCAGCAGCGTCGATACTGTGGTTTCGAAACTCGCCGTCGAATAAATA
ATTTCATTTCCGGTGATTGCTGCGAAGGCATTTTTGGTCCAGTCGTAGAC
TGCAATATGGAGTATCCGTACGGTCTACCGACGTGACCCAGGACATTATG
TGTTTCTGTATCCCTTCAGACGACGAGAAGTGCGACGACTACAAGTGCCC
CGACGGCTGGAGGTGGATGAAGGACTACAAGGGCAAGAAGTGCTACGAGG
AGTGCGACAAGGACGAATGTTGCGAGAAGGAAAGGGGTGAGTTGGGTGTG
ATTATTGGTCGGCGACTATTGAGGATGAAACCTGTATCGGGGCGTACACC
TCGAGAGGCAGGGAACTGTGGTTTGGATCGTCGCTCTTCCTTTATTCAGC
CGCATCGACTATATGTTGTAGAAAGTCGGCGTAATACCAACAGGGTGTTT
GGCTATAATTTCGAGGAGTCGCATGGTTGGTCTATTCGTAGACTGCAATA
TCAAGTATCCGTATGTTCTACCGGTTGGACCGGTGTCGTCGTACGTGGCC
GCATTTCCACAGACGACGAGAAGTGCGACGACTACGAGTGCCCCGACGGC
TGGATGTGGACGAAAGACTACAAGGGCAAGAAGTGC back to topCoding sequence (CDS) from alignment at H-paniculata_contig4832:2063..9798- >mRNA_H-paniculata_contig4832.11942.1 ID=mRNA_H-paniculata_contig4832.11942.1|Name=mRNA_H-paniculata_contig4832.11942.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=882bp|location=Sequence derived from alignment at H-paniculata_contig4832:2063..9798- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTCCGCAGCCTTGACAGCCAAAACGAGATGTTCCGCAGCCTTGACAG
CCAAAACGAGTGCCAGGACTACAAGTGCCCACACCGTTGGAGCCCGCTGA
AGGACTACAAGGACAAAAAATGCTACGATGGGTGCGAGAGAGATGACTGC
TGTGAGAAGATGGTGCCAGGACTACAAGTGCCCACACCGTTGGAGCCCGC
TGAAGGACTACAAGGACAAAAAATGCTACGATGGGTGCGAGAGAGATGAC
TGCTGTGAGAAGATGGACGACGAGAAGTGCGACGACTACAAGTGCCCCAA
CGGCTGGAGGTGGATGAAGGACTACAAGGGCAAGAAGTGCTACGAGGAGT
GCGACCAGGACGAATGTTGCGAGAAGGAAAGGGACGACGAGAAGTGCGAC
GACTACAAGTGCCCCAACGGCTGGAGGTGGATGAAGGACTACAAGGGCAA
GAAGTGCTACGAGGAGTGCGACCAGGACGAATGTTGCGAGAAGGAAAGGG
ACGACGGGAAGTGCGACGACTACGAGTGCCCCGACGGCTGGACGTGGATG
AAGGACTACAAGGGCAAGAAGTGCTACGAAGAGTGCGACCAGGACGATTG
TTGCGAGAAGGAAAGGGACGACGGGAAGTGCGACGACTACGAGTGCCCCG
ACGGCTGGACGTGGATGAAGGACTACAAGGGCAAGAAGTGCTACGAAGAG
TGCGACCAGGACGATTGTTGCGAGAAGGAAAGGGACGACGAGAAGTGCGA
CGACTACGAGTGCCCCGACGGCTGGATGTGGACGAAAGACTACAAGGGCA
AGAAGTGCACGACGAGAAGTGCGACGACTACGAGTGCCCCGACGGCTGGA
TGTGGACGAAAGACTACAAGGGCAAGAAGTGC back to top
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