prot_H-paniculata_contig48307.11939.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig48307.11939.1
Unique Nameprot_H-paniculata_contig48307.11939.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length69
Homology
BLAST of mRNA_H-paniculata_contig48307.11939.1 vs. uniprot
Match: A0A6H5JV56_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV56_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 9.220e-9
Identity = 25/49 (51.02%), Postives = 38/49 (77.55%), Query Frame = 0
Query:    1 LHLAANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQLADILTK 49
            L L +N  +SNRS+HI++R+ ALR W+ S+++ +DHV S+  L+DILTK
Sbjct:  815 LSLFSNGTFSNRSRHISVRYEALRGWVSSSRIALDHVPSSHMLSDILTK 863          
BLAST of mRNA_H-paniculata_contig48307.11939.1 vs. uniprot
Match: A0A6H5K9R3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9R3_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 1.720e-8
Identity = 28/67 (41.79%), Postives = 43/67 (64.18%), Query Frame = 0
Query:    1 LHLAANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQLADILTKHCERVVFTQLRSKVLTFG 67
            L LAAN+ +S+R+KHIA+RF  L++ I+   + + HV +   LADI TKH +R  F  +  ++  FG
Sbjct:  792 LSLAANTMFSSRTKHIALRFFVLQESIKPRHIAVHHVPTQAMLADIATKHLDRNKFNSIIHQIKDFG 858          
BLAST of mRNA_H-paniculata_contig48307.11939.1 vs. uniprot
Match: A0A085MHH4_9BILA (Uncharacterized protein n=2 Tax=Trichuris suis TaxID=68888 RepID=A0A085MHH4_9BILA)

HSP 1 Score: 54.3 bits (129), Expect = 4.000e-8
Identity = 27/58 (46.55%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    3 LAANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQLADILTKHCERVVFTQLR 60
            L  N  +  R+KHIA+++  +R+   +  L I+HVAS DQLADI+TK   RV F +LR
Sbjct:   12 LVRNPEFHKRTKHIAVKYHFVREKFLNGDLDIEHVASMDQLADIMTKPLGRVRFRELR 69          
BLAST of mRNA_H-paniculata_contig48307.11939.1 vs. uniprot
Match: A0A6H5JRF1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF1_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 1.110e-7
Identity = 30/64 (46.88%), Postives = 39/64 (60.94%), Query Frame = 0
Query:    4 AANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQLADILTKHCERVVFTQLRSKVLTFG 67
            A NS +  RSK I+ R+  LR  +    +V+  V S +QLADILTKH ERV F +LR+ V   G
Sbjct:  457 AGNSMFRGRSKFISTRYWLLRQNVNKGNIVLKFVRSEEQLADILTKHLERVQFVKLRTLVQEHG 520          
BLAST of mRNA_H-paniculata_contig48307.11939.1 vs. uniprot
Match: A0A6H5J897_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J897_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 1.120e-7
Identity = 30/64 (46.88%), Postives = 39/64 (60.94%), Query Frame = 0
Query:    4 AANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQLADILTKHCERVVFTQLRSKVLTFG 67
            A NS +  RSK I+ R+  LR  +    +V+  V S +QLADILTKH ERV F +LR+ V   G
Sbjct:  640 AGNSMFRGRSKFISTRYWLLRQNVNKGNIVLKFVRSEEQLADILTKHLERVQFVKLRTLVQEHG 703          
BLAST of mRNA_H-paniculata_contig48307.11939.1 vs. uniprot
Match: A0A1Y1K7G3_PHOPY (Uncharacterized protein (Fragment) n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1K7G3_PHOPY)

HSP 1 Score: 55.8 bits (133), Expect = 1.390e-7
Identity = 28/65 (43.08%), Postives = 42/65 (64.62%), Query Frame = 0
Query:    3 LAANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQLADILTKHCERVVFTQLRSKVLTFG 67
            LA N ++  RSKHI +R   +R+ +++ ++ I HVAS DQ+ADILTK   ++ F  LR K+  F 
Sbjct:  176 LARNPSFHKRSKHIDVRAHFVRERVQNKEMNIVHVASEDQVADILTKPIPKIQFQHLREKLGMFS 240          
BLAST of mRNA_H-paniculata_contig48307.11939.1 vs. uniprot
Match: A0A438DUA3_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438DUA3_VITVI)

HSP 1 Score: 56.2 bits (134), Expect = 1.540e-7
Identity = 30/62 (48.39%), Postives = 39/62 (62.90%), Query Frame = 0
Query:    2 HLAANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQLADILTKHCERVVFTQLRSKV 63
            HLAANS + +RSKHI +    +R+ +   +L I +V S DQLADI TKH     F  LRSK+
Sbjct:  888 HLAANSVFHSRSKHIELDLHFIREKVLRQELQICYVPSGDQLADIFTKHLPITQFCNLRSKL 949          
BLAST of mRNA_H-paniculata_contig48307.11939.1 vs. uniprot
Match: A0A5N6NNG9_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NNG9_9ASTR)

HSP 1 Score: 55.1 bits (131), Expect = 2.010e-7
Identity = 26/62 (41.94%), Postives = 41/62 (66.13%), Query Frame = 0
Query:    2 HLAANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQLADILTKHCERVVFTQLRSKV 63
            +L AN  Y +R KH+A+ +  +R+ +   +L + H+ SADQLAD+LTK   R  F +LR+K+
Sbjct:  125 YLCANPVYHSRMKHVALDYHFVREKVVGGELQVQHIHSADQLADVLTKPLGRGPFQRLRAKI 186          
BLAST of mRNA_H-paniculata_contig48307.11939.1 vs. uniprot
Match: A0A834HNH3_RHOSS (CCHC-type domain-containing protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834HNH3_RHOSS)

HSP 1 Score: 55.5 bits (132), Expect = 2.850e-7
Identity = 29/62 (46.77%), Postives = 39/62 (62.90%), Query Frame = 0
Query:    2 HLAANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQLADILTKHCERVVFTQLRSKV 63
            ++ AN  + +R KHIAI F  +RD +    L + HVA+ADQLAD LTK   R   + LRSK+
Sbjct:  537 YVCANPVFHSRMKHIAIDFHFVRDLVSKGILTVSHVATADQLADALTKPLSRQRLSLLRSKI 598          
BLAST of mRNA_H-paniculata_contig48307.11939.1 vs. uniprot
Match: A0A8J6LGP6_TENMO (Integrase catalytic domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6LGP6_TENMO)

HSP 1 Score: 55.5 bits (132), Expect = 2.890e-7
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 0
Query:    3 LAANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQLADILTKHCERVVFTQLRSKV 63
            LA N  +  RSKHI +R   +R+ +   +L+I+H+AS DQ+AD+LTK      F +LR K+
Sbjct:  635 LAKNPIFHKRSKHIDVRAHFVRELVEEGKLIIEHIASKDQVADLLTKPIPSTQFRRLRDKI 695          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig48307.11939.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JV56_9PHAE9.220e-951.02Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K9R3_9PHAE1.720e-841.79Integrase catalytic domain-containing protein n=1 ... [more]
A0A085MHH4_9BILA4.000e-846.55Uncharacterized protein n=2 Tax=Trichuris suis Tax... [more]
A0A6H5JRF1_9PHAE1.110e-746.88Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5J897_9PHAE1.120e-746.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1Y1K7G3_PHOPY1.390e-743.08Uncharacterized protein (Fragment) n=1 Tax=Photinu... [more]
A0A438DUA3_VITVI1.540e-748.39Retrovirus-related Pol polyprotein from transposon... [more]
A0A5N6NNG9_9ASTR2.010e-741.94Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
A0A834HNH3_RHOSS2.850e-746.77CCHC-type domain-containing protein n=1 Tax=Rhodod... [more]
A0A8J6LGP6_TENMO2.890e-742.62Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig48307contigH-paniculata_contig48307:855..1061 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig48307.11939.1mRNA_H-paniculata_contig48307.11939.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig48307 855..1061 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig48307.11939.1 ID=prot_H-paniculata_contig48307.11939.1|Name=mRNA_H-paniculata_contig48307.11939.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=69bp
LHLAANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQLADILTKH
CERVVFTQLRSKVLTFGK*
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