mRNA_H-paniculata_contig4829.11933.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4829.11933.1
Unique NamemRNA_H-paniculata_contig4829.11933.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig4829.11933.1 vs. uniprot
Match: A0A6V1VDI3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VDI3_HETAK)

HSP 1 Score: 160 bits (405), Expect = 1.490e-44
Identity = 76/136 (55.88%), Postives = 98/136 (72.06%), Query Frame = 2 
Query:  335 RVDIPLELEGKLDSAREWEIEMELDGEVQVLTVKEGTSVLNAAKSVYDSPPHSCQQGICTTCAGFIREGKEGESYRVAVDALSNEQKSEGFTLTCQTYPCGPGLKVLLNQYDKVYERQYGQYEISEQKKQKKGFMG 742
            R+ +PLELEGKLD ++ WEIE+ LDG  +++TV E   VL AA+ V+D PP SC+ G+CTTC+  I EGKEGE+Y++AV  L     S+GFT++CQT+  GPG+K+ LNQYD VYE QYGQYE    K  KK F G
Sbjct:   33 RMGVPLELEGKLDPSKTWEIELTLDGVTKMVTVSEADCVLEAAEKVFDDPPFSCRNGVCTTCSCRIVEGKEGENYKLAVHGLGETALSQGFTMSCQTHVTGPGVKIELNQYDTVYEMQYGQYEKGTAKDTKKSFFG 168
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BLAST of mRNA_H-paniculata_contig4829.11933.1 vs. uniprot
Match: A0A835Z8W8_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8W8_9STRA)

HSP 1 Score: 159 bits (403), Expect = 4.150e-44
Identity = 78/135 (57.78%), Postives = 101/135 (74.81%), Query Frame = 2 
Query:  344 IPLELEGKLDSAREWEIEMELDGEVQVLTVKEGTSVLNAAKSVYDSPPHSCQQGICTTCAGFIREGKEGESYRVAVDALSNEQKSEGFTLTCQTYPCGPGLKVLLNQYDKVYERQYGQYEISEQKKQKKGFMGMF 748
            +PLELEGKLD ++ WE+E+ LDGE + +TV EGTSVL AA+ V+D PP SC+ G+CTTCAGFI EG++  S+ +AV  L  +  + GFTLTCQTYP GPGLKV LN+YD+VY  QYG++E SE  K+  G   +F
Sbjct:   45 VPLELEGKLDPSKSWEVELVLDGETKKVTVPEGTSVLEAAEMVFDDPPFSCRNGVCTTCAGFIEEGRD--SHLMAVHGLGRDILATGFTLTCQTYPTGPGLKVALNKYDEVYWEQYGKHEKSELDKRAAGERKVF 177
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BLAST of mRNA_H-paniculata_contig4829.11933.1 vs. uniprot
Match: A0A0G4EXA3_VITBC (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EXA3_VITBC)

HSP 1 Score: 140 bits (354), Expect = 1.600e-37
Identity = 62/124 (50.00%), Postives = 91/124 (73.39%), Query Frame = 2 
Query:  341 DIPLELEGKLDSAREWEIEMELDGEVQVLTVKEGTSVLNAAKSVYDSPPHSCQQGICTTCAGFIREGKEGESYRVAVDALSNEQKSEGFTLTCQTYPCGPGLKVLLNQYDKVYERQYGQYEISE 712
            ++P++LEG+LD +R W IE+  DG+++ + V EGTSVL AA++V++ PP  C+ G+CT+CAG I  GK GE+Y +  D+L    K +G+ LTCQTY CGPGLKV LN+ ++VY  QYG++E  +
Sbjct:    5 EVPVDLEGRLDPSRSWTIELNYDGDIETVEVPEGTSVLEAAETVWEDPPCDCRNGVCTSCAGRIVGGKLGEAYVINRDSLEEVTKDKGYVLTCQTYVCGPGLKVELNKNEEVYGMQYGRFEYGQ 128
[Close]
BLAST of mRNA_H-paniculata_contig4829.11933.1 vs. uniprot
Match: A0A835Z7P0_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7P0_9STRA)

HSP 1 Score: 142 bits (357), Expect = 2.120e-37
Identity = 72/142 (50.70%), Postives = 97/142 (68.31%), Query Frame = 2 
Query:  335 RVDIPLELEGKLDSAREWEIEMELDGEVQVLTVKEGTSVLNAAKSVYDSPPHSCQQGICTTCAGFIREGKEGESYRVAVDALSNEQKSEGFTLTCQTYPCGPGLKVLLNQYDKVYERQYGQYEISEQKKQKKG----FMGMF 748
            R  +P ELE +LD AR WE+E+ L+GE +V+T+ EGTSVL AA+ V+D PP+SC+ G+C+TCAG I  G    S R AV  L  +   EG+ LTCQTYP GPG+KV LN+ D+VY +QYG++   EQ+++  G      GMF
Sbjct:   33 RSAMPQELETELDPARTWEVELTLNGETKVVTIPEGTSVLEAAELVFDDPPNSCRNGVCSTCAGHIDGG--ANSVRYAVSGLGQDLLGEGYALTCQTYPAGPGVKVSLNKMDEVYMQQYGKHSEEEQERKMSGGKTKVFGMF 172
[Close]
BLAST of mRNA_H-paniculata_contig4829.11933.1 vs. uniprot
Match: A0A4D9D4I2_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4I2_9STRA)

HSP 1 Score: 141 bits (356), Expect = 3.990e-37
Identity = 66/136 (48.53%), Postives = 97/136 (71.32%), Query Frame = 2 
Query:  335 RVDIPLELEGKLDSAREWEIEMELDGEVQVLTVKEGTSVLNAAKSVYDSPPHSCQQGICTTCAGFIREGKEGESYRVAVDALSNEQKSEGFTLTCQTYPCGPGLKVLLNQYDKVYERQYGQYEIS--EQKKQKKGF 736
            ++D+P +LEG+LD  R W++ M L+GE + ++V EGTS+L+AA+  +  PP  C+ G+CTTCA  +  G  G S+  A+++LS EQ+  GF L+CQTYPCGPGL+V LN  ++VYE QY +YE    E+ ++KKGF
Sbjct:   44 KIDVPPDLEGRLDPKRHWDVVMSLNGETKTVSVSEGTSLLDAAEEAFGDPPCMCRNGVCTTCAAEVTRGGHG-SWVAAIESLSPEQQESGFILSCQTYPCGPGLEVRLNAQEEVYESQYAKYETKAHEELEKKKGF 178
[Close]
BLAST of mRNA_H-paniculata_contig4829.11933.1 vs. uniprot
Match: A0A7S2XX00_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX00_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.010e-34
Identity = 64/135 (47.41%), Postives = 99/135 (73.33%), Query Frame = 2 
Query:  344 IPLELEGKLDSAREWEIEMELDGEVQVLTVKEGTSVLNAAKSVYDSPPHSCQQGICTTCAGFIREGKEGESYRVAVDALSNEQKSEGFTLTCQTYPCGPGLKVLLNQYDKVYERQYGQYEISEQKKQKKGFMGMF 748
            +P+ELEG+L+ A +W++ +  +GE +V+TV E  ++L A++ ++   P SC+ GICTTCA  +  G+E  S  +AV  LS EQ+ +G+TL CQ+Y  GPGLKV L +YD+VYE QYG+YE ++Q+++KK F+G+F
Sbjct:    9 VPVELEGQLNPANKWDVSITFNGETKVITVPEDQNILEASEELFGDVPCSCRNGICTTCAAMVTGGEE--SLTLAVHGLSAEQREKGYTLCCQSYATGPGLKVELGKYDEVYEDQYGKYERNQQEEKKK-FLGIF 140
[Close]
BLAST of mRNA_H-paniculata_contig4829.11933.1 vs. uniprot
Match: A0A4D9D796_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D796_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.990e-33
Identity = 68/131 (51.91%), Postives = 86/131 (65.65%), Query Frame = 2 
Query:  344 IPLELEGKLDSAREWEIEMELDGEVQVLTVKEGTSVLNAAKSVYDSPPHSCQQGICTTCAGFIREGKEGESYRVAVDALSNEQKSEGFTLTCQTYPCGPGLKVLLNQYDKVYERQYGQYEISEQKKQKKGF 736
            +PLELEG+LD  + W+++M   GE +VLTV E T +L AA+  +D P  SC+ GICTTCAG +    +  S + A+  LS EQ   GF LTCQT+PCGPGL+V L  YD VYE QYGQYE     +QK  F
Sbjct:   41 VPLELEGQLDPTKTWDVKMTYKGETKVLTVSEDTCILEAAEKEWDVPC-SCRNGICTTCAGRVIANPD--SKKEAIHGLSAEQSKNGFVLTCQTHPCGPGLEVELGMYDTVYESQYGQYEKKATTEQKSKF 168
[Close]
BLAST of mRNA_H-paniculata_contig4829.11933.1 vs. uniprot
Match: A0A482SJE6_9ARCH (2Fe-2S iron-sulfur cluster binding domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJE6_9ARCH)

HSP 1 Score: 63.9 bits (154), Expect = 3.660e-9
Identity = 26/62 (41.94%), Postives = 44/62 (70.97%), Query Frame = 2 
Query:  347 PLELEGKLDSAREWEIEMELDGEVQVLTVKEGTSVLNAAKSVYDSPPHSCQQGICTTCAGFI 532
            P+EL  +LD  R+W +++   G+ + +T++E TS+L AA+ ++   P+SC+ GICTTCAG +
Sbjct:   44 PIELVNRLDPNRKWTVKLIYKGQEKEVTIRETTSILEAAEKIWKDVPNSCRNGICTTCAGQV 105
[Close]
BLAST of mRNA_H-paniculata_contig4829.11933.1 vs. uniprot
Match: UPI0018D520C1 (2Fe-2S iron-sulfur cluster-binding protein n=1 Tax=Mycolicibacterium chitae TaxID=1792 RepID=UPI0018D520C1)

HSP 1 Score: 58.9 bits (141), Expect = 1.380e-7
Identity = 30/81 (37.04%), Postives = 48/81 (59.26%), Query Frame = 2 
Query:  398 MELDGEVQVLTVKEGTSVLNAAKSVYDSPPHSCQQGICTTCAGFIREGKEGESYRVAVDALSNEQKSEGFTLTCQTYPCGP 640
            ++LDG+   + +++G ++L AA+    +PP SC+ G C TC   +  G    + RV  DAL +++  EG+ LTCQ  P GP
Sbjct:    3 IQLDGKTAQVPLRDGETILEAARRAGMTPPFSCEAGNCGTCMAKLTSGTA--TMRVN-DALDDDEVEEGYVLTCQGTPDGP 80
[Close]
BLAST of mRNA_H-paniculata_contig4829.11933.1 vs. uniprot
Match: A0A448I3L6_MYCCI (Ferredoxin n=1 Tax=Mycolicibacterium chitae TaxID=1792 RepID=A0A448I3L6_MYCCI)

HSP 1 Score: 59.3 bits (142), Expect = 1.740e-7
Identity = 30/83 (36.14%), Postives = 49/83 (59.04%), Query Frame = 2 
Query:  392 IEMELDGEVQVLTVKEGTSVLNAAKSVYDSPPHSCQQGICTTCAGFIREGKEGESYRVAVDALSNEQKSEGFTLTCQTYPCGP 640
            + ++LDG+   + +++G ++L AA+    +PP SC+ G C TC   +  G    + RV  DAL +++  EG+ LTCQ  P GP
Sbjct:   23 VTIQLDGKTAQVPLRDGETILEAARRAGMTPPFSCEAGNCGTCMAKLTSGTA--TMRVN-DALDDDEVEEGYVLTCQGTPDGP 102
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4829.11933.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V1VDI3_HETAK1.490e-4455.88Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835Z8W8_9STRA4.150e-4457.782Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A0G4EXA3_VITBC1.600e-3750.002Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A835Z7P0_9STRA2.120e-3750.702Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A4D9D4I2_9STRA3.990e-3748.532Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S2XX00_9STRA1.010e-3447.41Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9D796_9STRA1.990e-3351.912Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A482SJE6_9ARCH3.660e-941.942Fe-2S iron-sulfur cluster binding domain-containi... [more]
UPI0018D520C11.380e-737.042Fe-2S iron-sulfur cluster-binding protein n=1 Tax... [more]
A0A448I3L6_MYCCI1.740e-736.14Ferredoxin n=1 Tax=Mycolicibacterium chitae TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4829contigH-paniculata_contig4829:8208..14571 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score74.7
Seed ortholog evalue5.1e-11
Seed eggNOG ortholog2880.D7FKV0
Hectar predicted targeting categorychloroplast
EggNOG free text desc.2Fe-2S iron-sulfur cluster binding domain
EggNOG OGs2T1YF@2759,COG0633@1
Ec32 ortholog description2Fe-2S ferredoxin-type domain
Ec32 orthologEc-06_010720.1
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1110
Cds size567
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4829.11933.1prot_H-paniculata_contig4829.11933.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4829 8392..14212 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930430.4035864-UTR-H-paniculata_contig4829:8207..83911622930430.4035864-UTR-H-paniculata_contig4829:8207..8391Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4829 8208..8391 +
1691481288.7462714-UTR-H-paniculata_contig4829:8207..83911691481288.7462714-UTR-H-paniculata_contig4829:8207..8391Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4829 8208..8391 +
1622930430.4852712-UTR-H-paniculata_contig4829:14212..145711622930430.4852712-UTR-H-paniculata_contig4829:14212..14571Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4829 14213..14571 +
1691481288.794278-UTR-H-paniculata_contig4829:14212..145711691481288.794278-UTR-H-paniculata_contig4829:14212..14571Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4829 14213..14571 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930430.4176335-CDS-H-paniculata_contig4829:8391..84921622930430.4176335-CDS-H-paniculata_contig4829:8391..8492Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4829 8392..8492 +
1691481288.7561185-CDS-H-paniculata_contig4829:8391..84921691481288.7561185-CDS-H-paniculata_contig4829:8391..8492Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4829 8392..8492 +
1622930430.434324-CDS-H-paniculata_contig4829:10855..109671622930430.434324-CDS-H-paniculata_contig4829:10855..10967Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4829 10856..10967 +
1691481288.7641156-CDS-H-paniculata_contig4829:10855..109671691481288.7641156-CDS-H-paniculata_contig4829:10855..10967Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4829 10856..10967 +
1622930430.4539263-CDS-H-paniculata_contig4829:11450..116541622930430.4539263-CDS-H-paniculata_contig4829:11450..11654Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4829 11451..11654 +
1691481288.7732673-CDS-H-paniculata_contig4829:11450..116541691481288.7732673-CDS-H-paniculata_contig4829:11450..11654Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4829 11451..11654 +
1622930430.4708195-CDS-H-paniculata_contig4829:14062..142121622930430.4708195-CDS-H-paniculata_contig4829:14062..14212Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4829 14063..14212 +
1691481288.7828348-CDS-H-paniculata_contig4829:14062..142121691481288.7828348-CDS-H-paniculata_contig4829:14062..14212Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4829 14063..14212 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4829.11933.1

>prot_H-paniculata_contig4829.11933.1 ID=prot_H-paniculata_contig4829.11933.1|Name=mRNA_H-paniculata_contig4829.11933.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=189bp
MKMHTTLAVLAAAGSGVQTSCAFVTPFVGKPFVSSAVERSTVGTPSMVAP
RVDIPLELEGKLDSAREWEIEMELDGEVQVLTVKEGTSVLNAAKSVYDSP
PHSCQQGICTTCAGFIREGKEGESYRVAVDALSNEQKSEGFTLTCQTYPC
GPGLKVLLNQYDKVYERQYGQYEISEQKKQKKGFMGMF*
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mRNA from alignment at H-paniculata_contig4829:8208..14571+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4829.11933.1 ID=mRNA_H-paniculata_contig4829.11933.1|Name=mRNA_H-paniculata_contig4829.11933.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6364bp|location=Sequence derived from alignment at H-paniculata_contig4829:8208..14571+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAGAGAGCGAAAAATAGAGCGATTCTGGGTAATACTGGCAAGGTGACACA
GCCAGAGAGAAAGAGAGTGAGACAGAAACCAAAAGGCTCTGTGTCGAGAC
CACCTCTGTTGTTGGTGTGTCTCTTTTGTATGTTCTCTGTGCATTGTTCG
TGAGGCTTTTCATCACTTCTGTCACCCCGGGATCATGAAGATGCATACTA
CTCTGGCGGTACTGGCTGCGGCAGGTAGCGGCGTGCAAACGTCTTGCGCC
TTCGTTACACCTTTCGTTGGCAAGCCTTTCGTCAGGTGAGACACAGATGC
GCAAGCTTGCGCTTCTTCCATCAAGTGTATGCAGCTCTATGTGATTCCCT
CGTAGGGTTCGTTGTCTGGCTTGTAACGTGACTTCTCTGAAGCATGTGCA
ACATAGAAATTGAGGATGCTAACCTAATAAAACACCATCATTTGAGCGCG
TCCCCATCGAGCACGTGTACCTGCTGCCCGGACGAATGATAGACCTGCAT
GTATCGTTGATGTTGTGCTCATAATTCGAAAGCTTGAGACGCTATCTATT
TGTATGCCCCCAAGTTTCGATTCCCTGTTTTTGCATTGGGGTTCTGCCGC
GCCCACTCAGCGTTGACTTTCAGCCTGAGACGCACAACCCAAAACAAACA
TGAAAAAAGATTGTGCGGTTGCTAGATTCATTTCAAGTTTGACCATTTGT
TATTAATAGGATGCAAACATGATGTTTGGAGCCCGCGAATTGTGGGCGGC
AACCTGACATGAAGGAATATATCAGCATCGTCATCCTATGTTGTCTGTCT
TCGAAAGGTCCGACTCCAATATCTTGTCATTCAGGTTATAGAGATAGAGA
TGAACGTGGTGTCTGATAAATCCACATCGTTAACATCCCACCTGTCTCTG
CACAGTAATGAAATACTTGTACAGGATAAGTTACATGGCTGTGTCACTGA
TTTTTCAGATTTAATCCTTAAATCCTAGAAAAAAATATTCATCGTTCGTT
AGATAATAGTATGTTTGTTGTCATCATCAACCCCTTTTAGGCCACTTCTT
ATGAGACTTGAATTCTTCTTCAAAATAGGATTGTTGAAAATATTTCAAGT
AAAGAATCCAAGTGCTCTTTTCGGAACTTGGATTCTATAAATCGGAAGAA
CATGACCTAAGACAAGAGCGGCATCATCTGGACCCCCAAAACACGGCAGC
AATTATCTGATTGTCCAACGGTACTGTACTGTGAGGTACAACAGACAAGT
TCGGAAGCCGTCTTTAGAAAGTAGATATCTGTCTGTGACCAAATGAAAGC
CGACGAAAGTGTTTGCAATGTTGCTGGATGCGATGGGGCAACTGGGGTGT
GTTCACAGTTGTTTCCGTCAGTGTGCGGCACGCCTCTCGTCAAGGAGCAT
GGGTGTGGCGACCATCTCCAAAACAATGCGATAGCCTTCGATATCAATAT
ACATTTGTTGCAGTAAGACTTCGTTACTAGAAACAGCCTAAATACAGAGT
TTTACCCTAAATATCAACTTCCAGCTGCGTACTTGCAAAACAGTGTCATA
AACGAAAAATGCAACCCGCCTTATGGAGGCGTATACCCGTAGACACGAAT
ATACGTACCCTCACATCACACACAGGCCGAAAAAAAGGGAAGACGGGGCG
AAGCTGCAACTGCAACGGGATCCAATTTCACACGACAACCAAAACGAAAC
ACGCGTTATAAGATACAAGGTAGGTTACCGCAATCTGCACGTCGACAGCG
CAAAGAGTGAAGTACACGCTAGACATGAGTAACTCCCTCCATCGCGACAA
AAACAACGCGAGTCATTCAGTGTAGCGACACAAGTACACGGTGTGCAAAA
CACGCCAAGAACCGAAAATTACAGCAAGAAACCTCACAGTCACGAAGACG
CTACCGCCCATCCATGTTTTGAACACCTCAAGAATCCCAGTTTCCCATTA
GGAGTAGTAAATTGGATATTTCAATGGGATATTTGTAAAGTTAACAATTA
AAAGAATCATGTTTCCAATTTTTAAGGATCTAAGTCCCATAAGAAGTGGC
TTTGCATATGGAGGAAAAAACGTTGACGGGAACAAATATGTTGTCATGTC
CCGGCTGCCACGGCTGACTGTGGTATACCGTCTGCTGCTGTGGCTGTGGG
TACCATTACTCATAACAGGACTCTACACACGCAGTGGTTATCGTTTGCTA
CAGAAATCTCTTGATAATATGTGGGGGTGCCCGCCACCTCTTGTGTGCCG
CAAATATGGTGGTTCATCAAGCAGTATTGTCTGTATCTTTCGTCGCCGGA
CGCGAGCAAGTCTTCGACGTGATGCTGTTGTGCTGTGCAGCTGACTGCCA
CCGCTCGAGGGATCTAGTACAGTCTGTCAGCTGTATCACTTTTACATCAA
GTACACGGCGCTCCGGCTGTTGTGCCAGCCCTGACGTACGTGAATATTGC
CAAAGTGGCGAATGCCCTTTTACACCTAGCGTCGACATCTGATGTTCTAA
ATTCATATTTGCCATATGTTTGACGTTATAGGGGTTCAGATCGTTGTTAC
TAGAAATAGCTGAATTCTGTCCGCCCCACCTCCGCGCGTGCTCCTGCCTC
GGTTGCATGTATTTCTGTCTGACGCTGCGTCTTGTTCTGTTTGATCAGTT
CAGCGGTTGAGCGATCAACGGTCGGTACGCCCAGCATGGTGGCACCTCGC
GTCGATATCCCGCTGGAGTTGGAGGGGAAATTGGACTCTGCACGAGAGTG
GGAAATAGAGGTGAGCAGATCGTATGTACGGTATATTGTGGGCGCTCTGT
ATGCGGTACGGCATCTTTTTCAGTTGTTGCTTTACAGAACTTGGTTTCCT
AGTGAGTCTGTTCAGTGTTGTGCTTAATATTACTATAAAGAGTAGCAAGA
GCACGGATCAAGTTAACGTCTGAATGTAAATGTAAATCAGAATTGCCATT
TATTTCTAAATATCTTTTATCCGGTGAGCAATGTACACATTGGAAATATC
TGTGAATGTCGCCGTTGCGATAAGGATGAATCCTTTGGGCGTCGATTTCC
CTAATTTTCATCTGGAAAAAAAACAGGACAAACCATCCCCTATATCATGC
ATCATTTCAGAGATGGGAAGCTGCCGTGTTTCAGACAGGCAGGGACAGGG
AGTTGGTATGCGATTCTGTGCACATCGACTTCAATGCTTACAAACGTCGG
GGATCGATGAATCCTTGCCATATGACACCTCTGGACCTTTCAGATGGAAC
TAGACGGAGAAGTGCAGGTCCTGACAGTGAAGGAAGGGACGTCAGTGCTG
AACGCGGCGAAGTCGGTGTATGACTCCCCGCCGCACTCCTGCCAGCAAGG
GATTTGCACAACCTGCGCGGGCTTTATCCGGGAAGGGAAGGAGGGGGAGA
GCTACAGGGTGGCGGTGGATGCCTTGAGCAACGAGCAGAAAAGCGAGGTG
AGCCGGAAATTAGTATATCAAGCGCCAGGTGCCAAGTGGTAATTTTCGAT
GTTTTTTTTTATTATTCTCGTAGTGAACCAATGGCGTACGTAGCCCCAAA
CCCCCTCAAACTGTTCTGTGTTTCACAGGTGACATTTTGAAGACAGTTCT
TTGATAGTAGAATAGAATTGGAAATTATTCCGAGAGAAACGGACTGTATT
ACGGGCTTCAGCGCTGGTTCCCATTTAGCTCCTACCTCAACAATGGGGGA
AAACGAATCCTATGACATTGGTGCGAGGATGGGGAACCGCCGCTGTTGGG
GTGGACAGTCCATTGTGTACAGATAAAACACACCACAGCACCCAAGACAG
ATGGTGGCATGGTTCTGCCCAGAACGCCGGAATGACCACAGCGCCGCCCG
ACATTTGTTGTGAGATGCCTTTTTATCCCGAAACAACCTCCGGCATTAAA
CGGATTAAGATGCGGGTGAAATAGCTTCGAAGCCTGTCAGTTAACCAACG
AAAACACATCGTAAATCTATCACGTTTTCACTCCACTGAAAGAATTTATT
TAACCACTTTTCCCCGATTATTACGAAAATACACGTAGCCGTTGTGTACC
TCACCTATTTTGATTTGTTGACGTGCGATGCTGTGCATGATACTGACAGA
CAATCAAAAATTGTTGGTTTCCACTGTCCATTTTGTATGGGAAACGAAGG
ACAGGACTGTGAAATACCGTGGTCATTTTGCCGCAGTAGCTGTACCGGGG
AAAGCCGAGTAAAATTCATGGGTTGATAGAATCCCTCGCCGATTCGCAGT
ACACGGTTGTGTAAAGCTGTCGGTAGGACCGATACGATCTGCTCAATTTT
CGTCGTGAATGCTTGAAAAGTTTATATTCGTCTGACGGATGAAACTACGA
GTACTTTATGCCCTGTCCGTCTTAGCTATATAGGTATGTGTTTTATAATA
TAGTTTAGTCGGGGGTACAACTACTAAAACACAGCACCGATGCGCCTGCG
GAAGTGAACATGTAAAATATGATAATAAGATATGGGGATAGTATCCTAGA
GCTCCATATATGTAGAAAATTGAAAGACGTTCCCCCCCTGTGTCTGTACA
GGACAGACCACTTTTCGCAATAGCAATCGGATCACAGGAGATCGTGAGTT
CGAATCTGACCTCTCGACCACAGAAGAATTTTTTTTGCCAAAGTTGAGCT
GAAGCCGCAATATGGTACGGGATGTTGAGCACACTTGGTTGATATCTTGT
CTTCGATCCTGTTTTGGGATTTGTGGTGTGGAGTGCCTCGAGTTAGTACC
AAGCACGTTTGCGTATGTGTTCGTACACTATGTCTTCCGCTTTCATGTAC
GCAAACCAGATACGCTCATTTACGTGACCAAATTTCCGTCCGACTCCATC
AGAGATCGATGCGTGTCACTGCTGAATCTGCAAGTAATTTTCGCAGAAAA
TGTTACTTTTTTCGTCATGAAATATATCTGAATGTATCCAAAACGACTCG
AGACATGAAAATATGCCAAAATCAGTTGCATGAAAGGTTGTGCTGATGAA
TACACGTGGATGTGTTGATCCATATGCGTTATCGAAATTGATCAGGGGCA
TGTCGGCGTAATTGCCTTAAGTTGAAGTTCCGCGACGCTATTTAGCCCGC
CTGTTTGATTTCGAGGGGAACATACTCTAGCACGTAGCGGGCGAAGAGAA
ATCGTATTTTGAAGGTATGTATATATGCCCGAACCGAGCTACTGCAGAAA
TCCCTTTCCTCCACCCAGAAGCTTTCTGAAATATTTCGATTGTTTTGCGA
TATGTAGGTCGATTGGTTATTCCATGCGCAGCAACAGCAGCTATCTACTC
TAGGCGGTCAATAACTTTTTCTTTTTTTTTCAAATCAAGGAAGCATGGAG
GCCGGATAGTACCACCGTTGACTGAGGGAGATAAGATAACCTTATTGGGT
AATAGATTGCCAACAATTAAATTAATGAAAAGAGATCATTTTAATTGTTA
CCATATTATCACACTACCCTAAAGTAGTGGACCCAATTTCACGCCGCTAG
TGCCCGGGTAAAACAAATGGCCGCAAATGGGGTCCACAATTTGTACACTA
AAACCAAGTAAACAGTGATTTCTGAGCCCTGTTGTAAAAAAAGGCCGGAT
ATCAAAACGGTCGAACAATAAGTCCACTCCTGCTAGTGGGCGATTTGTGG
CACTAATGACCAATTGCTCTTCTAAATTCAAAATCGATTTTTGAGCTCGA
GTATCGTGCATTGTCTCCTTTCTCGCCGACGGTTATCATGCGTCTTATCA
CGCTATGGATAACTTTTACACGTCTCATGCTGTGCACGATGCCCAATTTT
GCTCCCGTTGCGCGACTTGCCGCGATGGCCCGTGTTTTGTTGTATCTTTG
TCCAGGGCTTCACGTTGACTTGCCAGACGTATCCGTGCGGACCGGGTCTC
AAAGTGTTGCTGAACCAGTACGACAAGGTGTACGAGAGGCAGTACGGTCA
ATACGAGATCAGCGAGCAAAAGAAGCAAAAGAAGGGCTTCATGGGCATGT
TTTAGACGAAAAGAAGACAGCTGTTCCTCTGATTATGGGATGGTGGAGTG
GACAGACGTTCTCATTTTATGCTGCTCCTGTTTTTTATTTCGTGTTGCAG
CGTAGATCGTTAGTACAGGTATTGTTGTCAGCTAAATCCAATTGTGTATG
TCCTGGGGTATGTTTTTTCAGCGAACCGCAGGGGAGTTATTTACCTCGGC
TGTCTTTTTCGGTCGATTGCTACAACGATCTCTCATCAGCACGAAGGAGA
TGTTCGACATGAAGGAGATTTACGATGTTGGCTTCAGTCAGTGATTGTAT
AGTTGCGGCCTGTTACTAAGAAATTGGCTAAATTTTTAAAAGCCACACTT
ACATTTGTTCAATC
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Coding sequence (CDS) from alignment at H-paniculata_contig4829:8208..14571+

>mRNA_H-paniculata_contig4829.11933.1 ID=mRNA_H-paniculata_contig4829.11933.1|Name=mRNA_H-paniculata_contig4829.11933.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1134bp|location=Sequence derived from alignment at H-paniculata_contig4829:8208..14571+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGATGCATACTACTCTGGCGGTACTGGCTGCGGCAGGTAGCGGCGT
GCAAACGTCTTGCGCCTTCGTTACACCTTTCGTTGGCAAGCCTTTCGTCA
GATGAAGATGCATACTACTCTGGCGGTACTGGCTGCGGCAGGTAGCGGCG
TGCAAACGTCTTGCGCCTTCGTTACACCTTTCGTTGGCAAGCCTTTCGTC
AGTTCAGCGGTTGAGCGATCAACGGTCGGTACGCCCAGCATGGTGGCACC
TCGCGTCGATATCCCGCTGGAGTTGGAGGGGAAATTGGACTCTGCACGAG
AGTGGGAAATAGAGTTCAGCGGTTGAGCGATCAACGGTCGGTACGCCCAG
CATGGTGGCACCTCGCGTCGATATCCCGCTGGAGTTGGAGGGGAAATTGG
ACTCTGCACGAGAGTGGGAAATAGAGATGGAACTAGACGGAGAAGTGCAG
GTCCTGACAGTGAAGGAAGGGACGTCAGTGCTGAACGCGGCGAAGTCGGT
GTATGACTCCCCGCCGCACTCCTGCCAGCAAGGGATTTGCACAACCTGCG
CGGGCTTTATCCGGGAAGGGAAGGAGGGGGAGAGCTACAGGGTGGCGGTG
GATGCCTTGAGCAACGAGCAGAAAAGCGAGATGGAACTAGACGGAGAAGT
GCAGGTCCTGACAGTGAAGGAAGGGACGTCAGTGCTGAACGCGGCGAAGT
CGGTGTATGACTCCCCGCCGCACTCCTGCCAGCAAGGGATTTGCACAACC
TGCGCGGGCTTTATCCGGGAAGGGAAGGAGGGGGAGAGCTACAGGGTGGC
GGTGGATGCCTTGAGCAACGAGCAGAAAAGCGAGGGCTTCACGTTGACTT
GCCAGACGTATCCGTGCGGACCGGGTCTCAAAGTGTTGCTGAACCAGTAC
GACAAGGTGTACGAGAGGCAGTACGGTCAATACGAGATCAGCGAGCAAAA
GAAGCAAAAGAAGGGCTTCATGGGCATGTTTTAGGGCTTCACGTTGACTT
GCCAGACGTATCCGTGCGGACCGGGTCTCAAAGTGTTGCTGAACCAGTAC
GACAAGGTGTACGAGAGGCAGTACGGTCAATACGAGATCAGCGAGCAAAA
GAAGCAAAAGAAGGGCTTCATGGGCATGTTTTAG
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