prot_H-paniculata_contig4828.11930.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4828.11930.1
Unique Nameprot_H-paniculata_contig4828.11930.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length98
Homology
BLAST of mRNA_H-paniculata_contig4828.11930.1 vs. uniprot
Match: A0A7S2GX84_9STRA (COX assembly mitochondrial protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GX84_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.000e-25
Identity = 44/83 (53.01%), Postives = 64/83 (77.11%), Query Frame = 0
Query:    2 GGQDARLKWTKKAELRLQEELKYIARKKCDSAIANFAQCAEENGLLVIFRCNQQNKKMNECLGKYTNPQSFEDYKRSREEELM 84
            GG+D RLKW+ +AE  L+ EL  IARK C+  I +F++CA+  GL+V+F C  QN++MN+CL KYTN ++FE+Y++SRE EL+
Sbjct:   19 GGRDGRLKWSNRAEYHLKGELNLIARKNCNETIKHFSECAQVQGLMVVFNCRNQNQQMNDCLAKYTNDKAFEEYRKSRESELL 101          
BLAST of mRNA_H-paniculata_contig4828.11930.1 vs. uniprot
Match: A0A8K1C5Z8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5Z8_PYTOL)

HSP 1 Score: 82.8 bits (203), Expect = 1.170e-18
Identity = 40/78 (51.28%), Postives = 54/78 (69.23%), Query Frame = 0
Query:    6 ARLKWTKKAELRLQEELKYIARKKCDSAIANFAQCAEENGLLVIFRCNQQNKKMNECLGKYTNPQSFEDYKRSREEEL 83
            +RL W+ +AE +L++EL  IA  KC      FA CA E+GL+VIFRC +QNK MN+CL +YTN + F  YK  RE+E+
Sbjct:   17 SRLSWSNQAEHKLRQELNDIAIAKCRDTTEKFAVCARESGLMVIFRCREQNKAMNDCLHQYTNDEQFRVYKEKREKEI 94          
BLAST of mRNA_H-paniculata_contig4828.11930.1 vs. uniprot
Match: A0A7S2KED9_9STRA (COX assembly mitochondrial protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KED9_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 7.420e-18
Identity = 36/81 (44.44%), Postives = 61/81 (75.31%), Query Frame = 0
Query:    3 GQDARLKWTKKAELRLQEELKYIARKKCDSAIANFAQCAEENGLLVIFRCNQQNKKMNECLGKYTNPQSFEDYKRSREEEL 83
            G+DARL + K AE +++ E K  A KKC+  + NF QCA+E+GLLV+F+C + N+K+NEC+ ++ +P+ FE++ ++ ++EL
Sbjct:   51 GRDARLSFRKFAEHKMKREFKEEAIKKCEQPLKNFGQCAQESGLLVVFKCREFNRKINECMTEHNSPEKFEEFLKANQDEL 131          
BLAST of mRNA_H-paniculata_contig4828.11930.1 vs. uniprot
Match: W7TAA2_9STRA (COX assembly mitochondrial protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TAA2_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.280e-16
Identity = 36/78 (46.15%), Postives = 55/78 (70.51%), Query Frame = 0
Query:    2 GGQDARLKWTKKAELRLQEELKYIARKKCDSAIANFAQCAEENGLLVIFRCNQQNKKMNECLGKYTNPQSFEDYKRSR 79
            G ++ RL+++K+AE  L++EL   ARK+C   +A FA CA+ENG+ VIF+C   N  MN CL +YT+   FE++K++R
Sbjct:   18 GSREGRLRFSKRAEQHLRDELALHARKQCQEPMAAFAACAKENGMFVIFKCRALNNAMNACLSQYTSESKFEEWKQTR 95          
BLAST of mRNA_H-paniculata_contig4828.11930.1 vs. uniprot
Match: K3X183_GLOUD (Uncharacterized protein n=2 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X183_GLOUD)

HSP 1 Score: 82.0 bits (201), Expect = 4.080e-16
Identity = 38/79 (48.10%), Postives = 56/79 (70.89%), Query Frame = 0
Query:    6 ARLKWTKKAELRLQEELKYIARKKCDSAIANFAQCAEENGLLVIFRCNQQNKKMNECLGKYTNPQSFEDYKRSREEELM 84
            +RL W+ +AE +L++EL  IA  KC S    FA+CA+E GL+V+ RC +QNK MN CL +YTNP+ F+ Y+  R +E++
Sbjct:  825 SRLSWSNQAEHKLRQELNDIAIAKCRSITEKFAECAKEQGLMVVVRCREQNKAMNACLHEYTNPEQFQLYRERRSKEVL 903          
BLAST of mRNA_H-paniculata_contig4828.11930.1 vs. uniprot
Match: H3GT38_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GT38_PHYRM)

HSP 1 Score: 80.5 bits (197), Expect = 1.410e-15
Identity = 36/84 (42.86%), Postives = 60/84 (71.43%), Query Frame = 0
Query:    6 ARLKWTKKAELRLQEELKYIARKKCDSAIANFAQCAEENGLLVIFRCNQQNKKMNECLGKYTNPQSFEDYKRSREEELMGKSPQ 89
            +RL W+ +AE +L++EL  IA  KC +    FA+CA+ NGL+V+F+C + N+++N CL +YTN + FE Y++ RE+E++ +  Q
Sbjct:  719 SRLSWSNQAEHKLRQELSDIAIAKCRNVSEKFAECAKANGLMVVFKCRENNRELNACLHQYTNAEQFEIYRQRREKEMLEEDKQ 802          
BLAST of mRNA_H-paniculata_contig4828.11930.1 vs. uniprot
Match: A0A1V9Z786_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z786_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.850e-15
Identity = 37/78 (47.44%), Postives = 54/78 (69.23%), Query Frame = 0
Query:    6 ARLKWTKKAELRLQEELKYIARKKCDSAIANFAQCAEENGLLVIFRCNQQNKKMNECLGKYTNPQSFEDYKRSREEEL 83
            +RL+W+ +AE +L +EL  IA KKC      F  C+ E+GLLV+F+C QQN  +N CL +YTNP+++E +K S+ E L
Sbjct:  243 SRLQWSNQAEHKLHQELNTIALKKCYDKTKAFVDCSHEHGLLVVFKCRQQNADLNACLHEYTNPEAYEKFKASKTEAL 320          
BLAST of mRNA_H-paniculata_contig4828.11930.1 vs. uniprot
Match: A0A5D6XX76_9STRA (COX assembly mitochondrial protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XX76_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 2.200e-15
Identity = 34/79 (43.04%), Postives = 55/79 (69.62%), Query Frame = 0
Query:    6 ARLKWTKKAELRLQEELKYIARKKCDSAIANFAQCAEENGLLVIFRCNQQNKKMNECLGKYTNPQSFEDYKRSREEELM 84
            +RL W+ +AE +L++EL  IA  KC    A+FA CA+E GLLV+F+C   NK MN+CL ++T+ + F+ Y+  R ++++
Sbjct:   24 SRLSWSNQAEHKLRQELNDIAIAKCRDVTASFAACAQEQGLLVVFKCRALNKAMNDCLHQFTSDEQFQAYRDKRSKDVL 102          
BLAST of mRNA_H-paniculata_contig4828.11930.1 vs. uniprot
Match: A0A6G0WRQ8_9STRA (COX assembly mitochondrial protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WRQ8_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.540e-14
Identity = 30/67 (44.78%), Postives = 51/67 (76.12%), Query Frame = 0
Query:    7 RLKWTKKAELRLQEELKYIARKKCDSAIANFAQCAEENGLLVIFRCNQQNKKMNECLGKYTNPQSFE 73
            RL+W+ +AE +L++EL  IA +KC    + F +C++ENG++V+F+C +QN+ +NECL +YTN ++ E
Sbjct:   22 RLQWSNQAENKLKQELNAIALQKCREYTSAFVECSKENGMMVVFKCREQNRVLNECLHQYTNKEALE 88          
BLAST of mRNA_H-paniculata_contig4828.11930.1 vs. uniprot
Match: K0RCG8_THAOC (COX assembly mitochondrial protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RCG8_THAOC)

HSP 1 Score: 71.2 bits (173), Expect = 5.310e-14
Identity = 33/81 (40.74%), Postives = 54/81 (66.67%), Query Frame = 0
Query:    3 GQDARLKWTKKAELRLQEELKYIARKKCDSAIANFAQCAEENGLLVIFRCNQQNKKMNECLGKYTNPQSFEDYKRSREEEL 83
            G+D RL +   AE +++ E K  A +KC   +  F QCA++NGL+V+FRC + NKK+NEC+ ++ + ++FE Y +   +EL
Sbjct:   18 GRDGRLSFRNFAEHKMRREFKDAAVEKCSEHLRAFGQCAQDNGLMVVFRCRELNKKINECMHEHNSHEAFERYIKEHSDEL 98          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4828.11930.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A7S2GX84_9STRA1.000e-2553.01COX assembly mitochondrial protein n=1 Tax=Dictyoc... [more]
A0A8K1C5Z8_PYTOL1.170e-1851.28Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2KED9_9STRA7.420e-1844.44COX assembly mitochondrial protein n=1 Tax=Skeleto... [more]
W7TAA2_9STRA1.280e-1646.15COX assembly mitochondrial protein n=3 Tax=Monodop... [more]
K3X183_GLOUD4.080e-1648.10Uncharacterized protein n=2 Tax=Globisporangium ul... [more]
H3GT38_PHYRM1.410e-1542.86Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A1V9Z786_9STRA1.850e-1547.44Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A5D6XX76_9STRA2.200e-1543.04COX assembly mitochondrial protein n=1 Tax=Pythium... [more]
A0A6G0WRQ8_9STRA1.540e-1444.78COX assembly mitochondrial protein n=1 Tax=Aphanom... [more]
K0RCG8_THAOC5.310e-1440.74COX assembly mitochondrial protein n=1 Tax=Thalass... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013892Cytochrome c oxidase biogenesis protein Cmc1-likePFAMPF08583Cmc1coord: 19..80
e-value: 3.9E-14
score: 52.4
IPR013892Cytochrome c oxidase biogenesis protein Cmc1-likePANTHERPTHR22977COX ASSEMBLY MITOCHONDRIAL PROTEINcoord: 7..78
NoneNo IPR availablePANTHERPTHR22977:SF5COX ASSEMBLY MITOCHONDRIAL PROTEIN HOMOLOGcoord: 7..78
NoneNo IPR availablePROSITEPS51808CHCHcoord: 27..70
score: 11.134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4828contigH-paniculata_contig4828:7376..12913 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4828.11930.1mRNA_H-paniculata_contig4828.11930.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4828 6575..13155 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4828.11930.1 ID=prot_H-paniculata_contig4828.11930.1|Name=mRNA_H-paniculata_contig4828.11930.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=98bp
MGGQDARLKWTKKAELRLQEELKYIARKKCDSAIANFAQCAEENGLLVIF
RCNQQNKKMNECLGKYTNPQSFEDYKRSREEELMGKSPQERQAAMSD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013892Cyt_c_biogenesis_Cmc1-like