prot_H-paniculata_contig48197.11913.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig48197.11913.1
Unique Nameprot_H-paniculata_contig48197.11913.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length95
Homology
BLAST of mRNA_H-paniculata_contig48197.11913.1 vs. uniprot
Match: A0A6H5K4Y9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4Y9_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 4.820e-8
Identity = 35/83 (42.17%), Postives = 42/83 (50.60%), Query Frame = 0
Query:    7 WVADSGATAHMIPSNGLMFDYETCSNFLVTVANGETLPIEGYDKMLVWTKGRGEIHKFSLSRVAHVPGLDTNLFSLQIVVKRG 89
            +VAD+GAT HM+ ++     YE C    V VA GET P  GY  + V    R       L RVAH P LD NL SL  +   G
Sbjct:  395 YVADTGATTHMLANSDGFVRYEECDR-RVRVAAGETFPTVGYGDVSVTLSSRDGTTDLILKRVAHTPRLDYNLISLTSLFDDG 476          
BLAST of mRNA_H-paniculata_contig48197.11913.1 vs. uniprot
Match: A0A535F6U2_9CHLR (DDE-type integrase/transposase/recombinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535F6U2_9CHLR)

HSP 1 Score: 55.8 bits (133), Expect = 5.890e-7
Identity = 28/87 (32.18%), Postives = 48/87 (55.17%), Query Frame = 0
Query:    7 WVADSGATAHMIPSNGLMFDYETCSNFL-VTVANGETLPIEGYDKMLVWTKGRGEIHKFSLSRVAHVPGLDTNLFSLQIVVKRGLTV 92
            W+ DSGA+ H  P   ++ DY+T    + V  A G+   I G   + +  +G+G     +L +V HVPG+D+NL S  +++ +G  +
Sbjct:  306 WILDSGASEHFTPYKHVLIDYKTLDKPVEVNTAKGKLFGI-GTGNVHLTVEGQGGFTPITLHKVLHVPGMDSNLLSSNVLLGKGFEI 391          
BLAST of mRNA_H-paniculata_contig48197.11913.1 vs. uniprot
Match: A0A2P4YE33_9STRA (Polyprotein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YE33_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 6.780e-6
Identity = 30/77 (38.96%), Postives = 43/77 (55.84%), Query Frame = 0
Query:    7 WVADSGATAHMIPSNGLMFDYETCS-NFLVTVANGETLPIEGYDKM-LVWTKGRGEIHKFSLSRVAHVPGLDTNLFS 81
            W+ DSGATAHM P  G +F+Y   S    VT+A+G+ + + G   + LV   G    ++  +  V H+PGLD  L S
Sbjct:  169 WLIDSGATAHMTPHRGDLFEYTEMSVEMHVTIADGKKIRVAGTGSVRLVGIDG----NRIEMVEVLHIPGLDRRLLS 241          
BLAST of mRNA_H-paniculata_contig48197.11913.1 vs. uniprot
Match: Q967L5_AEDAE (Uncharacterized protein n=1 Tax=Aedes aegypti TaxID=7159 RepID=Q967L5_AEDAE)

HSP 1 Score: 52.8 bits (125), Expect = 7.130e-6
Identity = 29/87 (33.33%), Postives = 46/87 (52.87%), Query Frame = 0
Query:    7 WVADSGATAHMIPSNGLMFDYETCSNFLVTVANGETLPIEGYDK-MLVWTKGRGEIHKFSLSRVAHVPGLDTNLFSLQIVVKRGLTV 92
            W+ DSGA+AHM         +E      +T+A+G+   I G    +L    G  E+ +  +S V +VPGL TNL S++ + ++ L V
Sbjct:  275 WIIDSGASAHMTCDKSFFITFEESCGGYITLADGKKTQILGEGAGVLHGIDGDDEVIRIDISGVKYVPGLSTNLISVEKLAQKKLDV 361          
BLAST of mRNA_H-paniculata_contig48197.11913.1 vs. uniprot
Match: A0A7J0D6S2_9ERIC (Uncharacterized protein n=1 Tax=Actinidia rufa TaxID=165716 RepID=A0A7J0D6S2_9ERIC)

HSP 1 Score: 50.4 bits (119), Expect = 4.260e-5
Identity = 32/82 (39.02%), Postives = 39/82 (47.56%), Query Frame = 0
Query:    7 WVADSGATAHMIPS-NGLMFDYETCSNFLVTVANGETLPIEGYDKMLVWTKGRGEI----HKFSLSRVAHVPGLDTNLFSLQ 83
            W+ DSGAT H+    N L   +       VTV NG TLPI           G G +    H F L  V HVPG+ +NL S+Q
Sbjct:  226 WLLDSGATNHITGDLNNLHLHHPYQGTDQVTVGNGNTLPIHN--------TGNGPLPTPSHSFQLRNVLHVPGIQSNLLSVQ 299          
BLAST of mRNA_H-paniculata_contig48197.11913.1 vs. uniprot
Match: A0A7J0D6V2_9ERIC (Uncharacterized protein n=1 Tax=Actinidia rufa TaxID=165716 RepID=A0A7J0D6V2_9ERIC)

HSP 1 Score: 50.4 bits (119), Expect = 4.460e-5
Identity = 32/82 (39.02%), Postives = 39/82 (47.56%), Query Frame = 0
Query:    7 WVADSGATAHMIPS-NGLMFDYETCSNFLVTVANGETLPIEGYDKMLVWTKGRGEI----HKFSLSRVAHVPGLDTNLFSLQ 83
            W+ DSGAT H+    N L   +       VTV NG TLPI           G G +    H F L  V HVPG+ +NL S+Q
Sbjct:  159 WLLDSGATNHITGDLNNLHLHHPYQGTDQVTVGNGNTLPIHN--------TGNGPLPTPSHSFQLRNVLHVPGIQSNLLSVQ 232          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig48197.11913.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5K4Y9_9PHAE4.820e-842.17Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A535F6U2_9CHLR5.890e-732.18DDE-type integrase/transposase/recombinase n=1 Tax... [more]
A0A2P4YE33_9STRA6.780e-638.96Polyprotein n=1 Tax=Phytophthora palmivora var. pa... [more]
Q967L5_AEDAE7.130e-633.33Uncharacterized protein n=1 Tax=Aedes aegypti TaxI... [more]
A0A7J0D6S2_9ERIC4.260e-539.02Uncharacterized protein n=1 Tax=Actinidia rufa Tax... [more]
A0A7J0D6V2_9ERIC4.460e-539.02Uncharacterized protein n=1 Tax=Actinidia rufa Tax... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig48197contigH-paniculata_contig48197:228..512 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig48197.11913.1mRNA_H-paniculata_contig48197.11913.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig48197 228..512 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig48197.11913.1 ID=prot_H-paniculata_contig48197.11913.1|Name=mRNA_H-paniculata_contig48197.11913.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=95bp
NGCEEFWVADSGATAHMIPSNGLMFDYETCSNFLVTVANGETLPIEGYDK
MLVWTKGRGEIHKFSLSRVAHVPGLDTNLFSLQIVVKRGLTVCLK
back to top