prot_H-paniculata_contig4806.11891.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4806.11891.1
Unique Nameprot_H-paniculata_contig4806.11891.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length278
Homology
BLAST of mRNA_H-paniculata_contig4806.11891.1 vs. uniprot
Match: D7G372_ECTSI (Sodium/hydrogen exchanger family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G372_ECTSI)

HSP 1 Score: 316 bits (809), Expect = 5.270e-95
Identity = 182/279 (65.23%), Postives = 210/279 (75.27%), Query Frame = 0
Query:    1 MTDMMLGLSFRATYTTTSFVHLFFFDRRAFLKECARNEDLNRALWRTVGVSVLRKFYGFHRMRLQDLQKMVQNSEFVDMGEDGVGEDMNKIEYKVEAMRAKAASRVESKQQSGSLDGMISVGSGVGGAVAMASKVTSSPGDDSDDDDGRIHVHKLCPDERGVSLAKTLSNMGLYNMGS--IPDATLAAAASALTPHSMAAKKASNSSSATQTLKVVDVEPRRLVLLVKGQLLPRPTTNSLPGVEMHTAPCLLTDVSGRLVFTKDTKMFLIPVGVVERSR 277
            MTD MLGL FRATYT+TSFVHLFFFDR +FL E   NEDLNR+LWRTVGVSVLRKFYGFH +RLQ+LQKMVQN+EFVD+ ++GVG    + EYKVEA+RAKAASR      + SL  + S   G       A +V +S   DS DDDGRIH+H+L  +ERG  +AKTLSNMGLYNM    + D +LA AA+ LTPHS          S+ QTLKVVDVEP+RLVLLVKGQLLPRP T+S P VEMH APCLLTDV GRLVF+KDTKMFLIPV VVE+S+
Sbjct: 1158 MTDSMLGLPFRATYTSTSFVHLFFFDRTSFLFEALANEDLNRSLWRTVGVSVLRKFYGFHCLRLQELQKMVQNAEFVDVMQEGVGVVTTQNEYKVEALRAKAASRAGLSHSNSSLSELNSAAEGA------APEVFNSAFQDSTDDDGRIHIHQLKENERG-GIAKTLSNMGLYNMDMDRMTDESLAEAATLLTPHS----------SSNQTLKVVDVEPKRLVLLVKGQLLPRPPTDSHPAVEMHMAPCLLTDVCGRLVFSKDTKMFLIPVSVVEKSK 1419          
BLAST of mRNA_H-paniculata_contig4806.11891.1 vs. uniprot
Match: A0A835Z8G2_9STRA (Sodium/hydrogen exchanger family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G2_9STRA)

HSP 1 Score: 211 bits (536), Expect = 2.640e-58
Identity = 134/296 (45.27%), Postives = 171/296 (57.77%), Query Frame = 0
Query:    1 MTDMMLGLSFRATYTTTSFVHLFFFDRRAFLKECARNEDLNRALWRTVGVSVLRKFYGFHRMRLQDLQKMVQNSEFVDMGEDGVGEDMNKIEYKVEAMRAKAASRVESKQQSGSLDGMISVGSGVGGAVAMASKVTSSPGDDSDDDDGRIHVHKLCPDERGVSLAKTLSNMGLYN-------MGSIPDATLAAAAS------------ALTPHSMAAKKASNSSSATQTLKVVDVEPRRLVLLVKGQLLPRPTTNSLPGVEMHTAPCLLTDVSGRLVFTKDTKMFLIPVGVVERSR 277
            MTD MLG  FR  YTT SFVH+F+FD+   L E AR +DLNR+LWRTVGV+VLRKF GF+RMRL +L K+V +SEFVD+   GVGE+ +++  +VE +RA+  +   S    G   G IS  +G  G    A+   +        DDG IH+ K+  D  G SL + L  MGLY         G    A +A+  S            A +P  +   KA+    A  +LK+VDV+    VLLV GQLLPRP T++ P VE   APCLLTDV GRLV T  TK+FLIPV  + R R
Sbjct: 1184 MTDQMLGRPFRGAYTTASFVHVFYFDKDRLLAEAARCDDLNRSLWRTVGVTVLRKFVGFNRMRLNELHKLVYSSEFVDLSRAGVGEETSEVALRVEQIRARMTA---SSSVGGMRHGSISGSTGDAGTPTSAAAAAA--------DDGAIHIKKMSRDPSGTSLKQALRQMGLYEGDFDDYLQGQQRHAHVASGGSVAGSGSSGGIAQARSPPMLQGPKAA----AHTSLKIVDVDASYYVLLVTGQLLPRPATDTAPAVEAQDAPCLLTDVEGRLVVTTATKLFLIPVSAISRVR 1464          
BLAST of mRNA_H-paniculata_contig4806.11891.1 vs. uniprot
Match: A0A836CH43_9STRA (Sodium/hydrogen exchanger family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH43_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 9.860e-7
Identity = 30/67 (44.78%), Postives = 41/67 (61.19%), Query Frame = 0
Query:    3 DMMLGLSFRATYTTTSFVHLFFFDRRAFLKECARNEDLNRALWRTVGVSVLRKFYGFHRMRLQDLQK 69
            D +L + + +TYTT SF HLFFFD+   L       +LNR LW ++ VSV+R   GF RM L+  Q+
Sbjct: 1202 DQLLEIPYHSTYTTASFAHLFFFDKAQILAMAEDMPELNRGLWWSLAVSVMRHHRGFRRMTLKVCQR 1268          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4806.11891.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G372_ECTSI5.270e-9565.23Sodium/hydrogen exchanger family n=1 Tax=Ectocarpu... [more]
A0A835Z8G2_9STRA2.640e-5845.27Sodium/hydrogen exchanger family n=1 Tax=Tribonema... [more]
A0A836CH43_9STRA9.860e-744.78Sodium/hydrogen exchanger family-domain-containing... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4806contigH-paniculata_contig4806:1769..5105 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4806.11891.1mRNA_H-paniculata_contig4806.11891.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4806 1769..14984 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4806.11891.1 ID=prot_H-paniculata_contig4806.11891.1|Name=mRNA_H-paniculata_contig4806.11891.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=278bp
MTDMMLGLSFRATYTTTSFVHLFFFDRRAFLKECARNEDLNRALWRTVGV
SVLRKFYGFHRMRLQDLQKMVQNSEFVDMGEDGVGEDMNKIEYKVEAMRA
KAASRVESKQQSGSLDGMISVGSGVGGAVAMASKVTSSPGDDSDDDDGRI
HVHKLCPDERGVSLAKTLSNMGLYNMGSIPDATLAAAASALTPHSMAAKK
ASNSSSATQTLKVVDVEPRRLVLLVKGQLLPRPTTNSLPGVEMHTAPCLL
TDVSGRLVFTKDTKMFLIPVGVVERSR*
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