mRNA_H-paniculata_contig479.11861.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig479.11861.1
Unique NamemRNA_H-paniculata_contig479.11861.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig479.11861.1 vs. uniprot
Match: D7FQ99_ECTSI (Trafficking protein particle complex subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ99_ECTSI)

HSP 1 Score: 264 bits (674), Expect = 3.080e-85
Identity = 137/153 (89.54%), Postives = 140/153 (91.50%), Query Frame = 3 
Query:   66 MFLQLFVVNKSGGLIYNQNLSAAAPRLTSNDWLRLGSTFHSLHAIASQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLQEIYELYTDYVLKNPFYELEMPIRCELFTSYLEELIERHS-AAGAPGG-----KKPSVQY 506
            MFLQLFVVNKSGGLIYNQNLS+AAPRL SNDWLRLGSTFHSLHAIA+QVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLG VLQEIYELYTDYVLKNPFYELEMPIRCELFT YLEELIERHS A GAP       KKP+ QY
Sbjct:    1 MFLQLFVVNKSGGLIYNQNLSSAAPRLNSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGGVLQEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIERHSNAGGAPXXXXXXXKKPAGQY 153
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BLAST of mRNA_H-paniculata_contig479.11861.1 vs. uniprot
Match: A0A835ZDL6_9STRA (Trafficking protein particle complex subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDL6_9STRA)

HSP 1 Score: 210 bits (535), Expect = 1.760e-64
Identity = 103/135 (76.30%), Postives = 121/135 (89.63%), Query Frame = 3 
Query:   66 MFLQLFVVNKSGGLIYNQNLSAAAPRLTSNDWLRLGSTFHSLHAIASQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLQEIYELYTDYVLKNPFYELEMPIRCELFTSYLEELIERHSAA 470
            MFLQLF++NKSG LI++Q+LS AAPRL+SND LRLGSTFHSLHAIA+QVAP+ SSGIEKLET T++L+  QTLTG KFVITA+  TP+L  VLQ IYELYTDYVLKNPFYELEMPIRCELFT +LE+L+ER++AA
Sbjct:    1 MFLQLFIINKSGSLIFHQDLSPAAPRLSSNDSLRLGSTFHSLHAIAAQVAPIASSGIEKLETATYRLRCLQTLTGAKFVITAQPNTPELEVVLQGIYELYTDYVLKNPFYELEMPIRCELFTQHLEKLVERYNAA 135
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BLAST of mRNA_H-paniculata_contig479.11861.1 vs. uniprot
Match: A0A7S2RJT7_9STRA (Trafficking protein particle complex subunit n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJT7_9STRA)

HSP 1 Score: 204 bits (518), Expect = 9.740e-62
Identity = 98/147 (66.67%), Postives = 116/147 (78.91%), Query Frame = 3 
Query:   66 MFLQLFVVNKSGGLIYNQNLSAAAPRLTSNDWLRLGSTFHSLHAIASQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLQEIYELYTDYVLKNPFYELEMPIRCELFTSYLEELIERHSAAGAPGGKKPSVQY 506
            MFL LF++++SGGLI+NQ+LS  APRL +NDWLRLGSTFH  HAIASQ+APV SSGIEKLETD+F L+ FQ  TG+KFVITAEAGT DL  VLQ +Y+ YTDYVLKNPFYELEMPIRCELFT  +  +I+ H +    G    + QY
Sbjct:    1 MFLHLFIISRSGGLIFNQDLSELAPRLNANDWLRLGSTFHGFHAIASQIAPVVSSGIEKLETDSFVLRCFQPPTGIKFVITAEAGTQDLEVVLQRVYQAYTDYVLKNPFYELEMPIRCELFTEAIARVIQSHGSQTGKGSSSRAHQY 147
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BLAST of mRNA_H-paniculata_contig479.11861.1 vs. uniprot
Match: K8Z5G7_NANGC (Trafficking protein particle complex subunit (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8Z5G7_NANGC)

HSP 1 Score: 197 bits (501), Expect = 3.070e-59
Identity = 96/135 (71.11%), Postives = 114/135 (84.44%), Query Frame = 3 
Query:   60 GSMFLQLFVVNKSGGLIYNQNLSAAAPRLTSNDWLRLGSTFHSLHAIASQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLQEIYELYTDYVLKNPFYELEMPIRCELFTSYLEELIERHS 464
            G MFL LFV+++SGGLIYN++LS++APRLT N+WL LGSTFH LH+IA+QVAP+ SSGIEKLE D  KLQ FQ+ TGVKFV+TAE GTPDL  VL  IYELY DYVLKNPFYE++MPIRC+LF   +E LIER+S
Sbjct:    2 GVMFLHLFVISRSGGLIYNKDLSSSAPRLTVNEWLVLGSTFHGLHSIAAQVAPLASSGIEKLECDNLKLQCFQSRTGVKFVLTAEPGTPDLDNVLHGIYELYADYVLKNPFYEMDMPIRCDLFQQGVERLIERNS 136
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BLAST of mRNA_H-paniculata_contig479.11861.1 vs. uniprot
Match: K3WRL1_GLOUD (Trafficking protein particle complex subunit n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRL1_GLOUD)

HSP 1 Score: 186 bits (471), Expect = 1.010e-54
Identity = 89/134 (66.42%), Postives = 109/134 (81.34%), Query Frame = 3 
Query:   66 MFLQLFVVNKSGGLIYNQNLSAAAPRLTSNDWLRLGSTFHSLHAIASQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLQEIYELYTDYVLKNPFYELEMPIRCELFTSYLEELIERHSA 467
            M   L+++NKSGGL+Y Q+LS+AAP+L+SND LRLGSTFHS+HAIA   +PV S GIE LETDTF+LQ FQT TG+KF +TA  GTPDL AVL+ +YELY DYVLKNPFYELEMPIRC LF S L+  +++ +A
Sbjct:    1 MLHSLYIINKSGGLVYQQDLSSAAPKLSSNDHLRLGSTFHSMHAIAVLASPVASGGIETLETDTFRLQCFQTPTGLKFFLTAALGTPDLDAVLRTVYELYVDYVLKNPFYELEMPIRCSLFNSGLKTFVDKFNA 134
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BLAST of mRNA_H-paniculata_contig479.11861.1 vs. uniprot
Match: A0A2D4CAE8_PYTIN (Trafficking protein particle complex subunit n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CAE8_PYTIN)

HSP 1 Score: 184 bits (467), Expect = 4.000e-54
Identity = 91/137 (66.42%), Postives = 107/137 (78.10%), Query Frame = 3 
Query:   66 MFLQLFVVNKSGGLIYNQNLSAAAPRLTSNDWLRLGSTFHSLHAIASQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLQEIYELYTDYVLKNPFYELEMPIRCELFTSYLEELIERHSAAGA 476
            M   L+++NKSGGLIY  +LS+AAPRL+SND LRLGSTFHS+HAIA   APV S GIE LETDTF+LQ FQT TG+KF ITA  GTPDL   L+ IYELY DYVLKNPFYELEMPIRC LF + L+  +++ +A  A
Sbjct:    1 MLHSLYIINKSGGLIYQLDLSSAAPRLSSNDHLRLGSTFHSMHAIAVLAAPVASGGIESLETDTFRLQCFQTPTGIKFFITAALGTPDLDHALRTIYELYVDYVLKNPFYELEMPIRCSLFNAGLKSFVDKFNADSA 137
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BLAST of mRNA_H-paniculata_contig479.11861.1 vs. uniprot
Match: F0WDB3_9STRA (Trafficking protein particle complex subunit n=3 Tax=Albugo TaxID=65356 RepID=F0WDB3_9STRA)

HSP 1 Score: 179 bits (454), Expect = 3.320e-52
Identity = 87/131 (66.41%), Postives = 105/131 (80.15%), Query Frame = 3 
Query:   66 MFLQLFVVNKSGGLIYNQNLSAAAPRLTSNDWLRLGSTFHSLHAIASQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLQEIYELYTDYVLKNPFYELEMPIRCELFTSYLEELIER 458
            M   L+++NKSGGLIY Q+LS AAP+L+SND LRLGSTFHS+HAIA+  APV S GI  LETDTF+LQ FQTLTG+KF ITA+ GT D+   L+ IYELY DYVLKNPFYELEMPIRC LF + L+  +++
Sbjct:    1 MLHALYIINKSGGLIYQQDLSPAAPKLSSNDHLRLGSTFHSMHAIAALAAPVASGGINSLETDTFRLQCFQTLTGIKFFITAQLGTLDIDNALKTIYELYVDYVLKNPFYELEMPIRCTLFNAGLKLFVDK 131
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BLAST of mRNA_H-paniculata_contig479.11861.1 vs. uniprot
Match: A0A7S4A735_9STRA (Trafficking protein particle complex subunit n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A735_9STRA)

HSP 1 Score: 174 bits (441), Expect = 3.430e-50
Identity = 83/136 (61.03%), Postives = 104/136 (76.47%), Query Frame = 3 
Query:   66 MFLQLFVVNKSGGLIYNQNLSAAAPRLTSNDWLRLGSTFHSLHAIASQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLQEIYELYTDYVLKNPFYELEMPIRCELFTSYLEELIERHSAAG 473
            M+LQL ++NKSGGL+YNQ+LS  A +L SNDWLR+GSTFHSLH IA  + P  SSGI  LET +F L+  +T+TG+KFV+TAE GT  L  VL+ +YELY+DYVLKNPF++LEMPIRC LFT ++ EL E     G
Sbjct:    1 MYLQLMIINKSGGLVYNQDLSPQAAQLDSNDWLRIGSTFHSLHEIARSIPPGRSSGIVALETSSFALRCLETITGIKFVLTAERGTQVLEPVLRMVYELYSDYVLKNPFHDLEMPIRCRLFTEHVTELFESFHTTG 136
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BLAST of mRNA_H-paniculata_contig479.11861.1 vs. uniprot
Match: M4BAF1_HYAAE (Trafficking protein particle complex subunit n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BAF1_HYAAE)

HSP 1 Score: 173 bits (439), Expect = 7.510e-50
Identity = 83/137 (60.58%), Postives = 102/137 (74.45%), Query Frame = 3 
Query:   66 MFLQLFVVNKSGGLIYNQNLSAAAPRLTSNDWLRLGSTFHSLHAIASQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLQEIYELYTDYVLKNPFYELEMPIRCELFTSYLEELIERHSAAGA 476
            M   L+++NK+GGLIY Q+LS AAP+L+SND LRLGSTFHS+HAIA+  AP  S GI+ LET TF+LQ  QT TG KF +TA  GTP +   LQ +YELY DYVLKNPFYELEMPIRC LF + L+  ++R +   A
Sbjct:    1 MLHSLYIINKAGGLIYQQDLSPAAPKLSSNDHLRLGSTFHSMHAIAALAAPTNSGGIDSLETGTFRLQCLQTPTGTKFFLTAALGTPSVDVTLQTVYELYVDYVLKNPFYELEMPIRCSLFNTRLKNFVDRFNLESA 137
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BLAST of mRNA_H-paniculata_contig479.11861.1 vs. uniprot
Match: A0A6G0XR37_9STRA (Trafficking protein particle complex subunit n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XR37_9STRA)

HSP 1 Score: 172 bits (437), Expect = 1.020e-49
Identity = 87/133 (65.41%), Postives = 106/133 (79.70%), Query Frame = 3 
Query:   66 MFLQLFVVNKSGGLIYNQNLSAAAPRLTSNDWLRLGSTFHSLHAIASQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITA--EAGTPDLGAVLQEIYELYTDYVLKNPFYELEMPIRCELFTSYLEELIER 458
            M L L+V+NK+GGLIY Q+LS+ AP+L+SND+LRLGSTFHS+HAIA+  APV S GI  +ETD+F+LQ FQ +TG KF ITA     + +L AVL +IYELY DYVLKNPFYELEMPIRC LF S L+ L+ER
Sbjct:    1 MLLSLYVINKAGGLIYQQDLSSEAPKLSSNDYLRLGSTFHSMHAIAALAAPVLSKGILSMETDSFRLQCFQAMTGTKFFITALPVLSSAELDAVLLQIYELYADYVLKNPFYELEMPIRCHLFHSNLQLLVER 133
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig479.11861.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ99_ECTSI3.080e-8589.54Trafficking protein particle complex subunit n=2 T... [more]
A0A835ZDL6_9STRA1.760e-6476.30Trafficking protein particle complex subunit n=1 T... [more]
A0A7S2RJT7_9STRA9.740e-6266.67Trafficking protein particle complex subunit n=1 T... [more]
K8Z5G7_NANGC3.070e-5971.11Trafficking protein particle complex subunit (Frag... [more]
K3WRL1_GLOUD1.010e-5466.42Trafficking protein particle complex subunit n=1 T... [more]
A0A2D4CAE8_PYTIN4.000e-5466.42Trafficking protein particle complex subunit n=2 T... [more]
F0WDB3_9STRA3.320e-5266.41Trafficking protein particle complex subunit n=3 T... [more]
A0A7S4A735_9STRA3.430e-5061.03Trafficking protein particle complex subunit n=1 T... [more]
M4BAF1_HYAAE7.510e-5060.58Trafficking protein particle complex subunit n=1 T... [more]
A0A6G0XR37_9STRA1.020e-4965.41Trafficking protein particle complex subunit n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig479contigH-paniculata_contig479:23854..27542 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score266.2
Seed ortholog evalue9.4e-69
Seed eggNOG ortholog2880.D7FQ99
Preferred nameTRAPPC4
KEGG koko:K20303
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005085,GO:0005088,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005793,GO:0005794,GO:0005795,GO:0005829,GO:0005886,GO:0006810,GO:0006886,GO:0006888,GO:0006900,GO:0006901,GO:0006903,GO:0006996,GO:0007275,GO:0007399,GO:0008021,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016358,GO:0017016,GO:0017112,GO:0017137,GO:0019899,GO:0022008,GO:0022607,GO:0030008,GO:0030030,GO:0030133,GO:0030154,GO:0030182,GO:0030425,GO:0031175,GO:0031267,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032800,GO:0032991,GO:0033036,GO:0034613,GO:0036477,GO:0042886,GO:0042995,GO:0043005,GO:0043112,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044260,GO:0044422,GO:0044424,GO:0044431,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045184,GO:0045202,GO:0045212,GO:0045213,GO:0046907,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048468,GO:0048666,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0051020,GO:0051179,GO:0051234,GO:0051276,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0061024,GO:0065003,GO:0065007,GO:0065009,GO:0070382,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0090114,GO:0097447,GO:0097458,GO:0097708,GO:0098772,GO:0098791,GO:0098793,GO:0099023,GO:0099503,GO:0120025,GO:0120036,GO:0120038,GO:1901576,GO:1990070,GO:1990071,GO:1990072
EggNOG free text desc.Rab guanyl-nucleotide exchange factor activity
EggNOG OGsCOG5122@1,KOG3369@2759
Ec32 ortholog descriptionSybindin-like protein
Ec32 orthologEc-01_006940.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons4
Model size1108
Cds size444
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig479.11861.1prot_H-paniculata_contig479.11861.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig479 24453..27477 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930419.8550901-UTR-H-paniculata_contig479:23853..244521622930419.8550901-UTR-H-paniculata_contig479:23853..24452Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig479 23854..24452 -
1691481283.8302262-UTR-H-paniculata_contig479:23853..244521691481283.8302262-UTR-H-paniculata_contig479:23853..24452Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig479 23854..24452 -
1622930419.9283454-UTR-H-paniculata_contig479:27477..275421622930419.9283454-UTR-H-paniculata_contig479:27477..27542Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig479 27478..27542 -
1691481283.8781996-UTR-H-paniculata_contig479:27477..275421691481283.8781996-UTR-H-paniculata_contig479:27477..27542Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig479 27478..27542 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930419.8734686-CDS-H-paniculata_contig479:24452..245781622930419.8734686-CDS-H-paniculata_contig479:24452..24578Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig479 24453..24578 -
1691481283.8422687-CDS-H-paniculata_contig479:24452..245781691481283.8422687-CDS-H-paniculata_contig479:24452..24578Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig479 24453..24578 -
1622930419.8865912-CDS-H-paniculata_contig479:25939..261131622930419.8865912-CDS-H-paniculata_contig479:25939..26113Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig479 25940..26113 -
1691481283.8513238-CDS-H-paniculata_contig479:25939..261131691481283.8513238-CDS-H-paniculata_contig479:25939..26113Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig479 25940..26113 -
1622930419.897984-CDS-H-paniculata_contig479:26363..264531622930419.897984-CDS-H-paniculata_contig479:26363..26453Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig479 26364..26453 -
1691481283.8597894-CDS-H-paniculata_contig479:26363..264531691481283.8597894-CDS-H-paniculata_contig479:26363..26453Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig479 26364..26453 -
1622930419.9109473-CDS-H-paniculata_contig479:27423..274771622930419.9109473-CDS-H-paniculata_contig479:27423..27477Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig479 27424..27477 -
1691481283.8691459-CDS-H-paniculata_contig479:27423..274771691481283.8691459-CDS-H-paniculata_contig479:27423..27477Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig479 27424..27477 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig479.11861.1

>prot_H-paniculata_contig479.11861.1 ID=prot_H-paniculata_contig479.11861.1|Name=mRNA_H-paniculata_contig479.11861.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=148bp
MFLQLFVVNKSGGLIYNQNLSAAAPRLTSNDWLRLGSTFHSLHAIASQVA
PVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLQEIYELY
TDYVLKNPFYELEMPIRCELFTSYLEELIERHSAAGAPGGKKPSVQY*
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mRNA from alignment at H-paniculata_contig479:23854..27542-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig479.11861.1 ID=mRNA_H-paniculata_contig479.11861.1|Name=mRNA_H-paniculata_contig479.11861.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3689bp|location=Sequence derived from alignment at H-paniculata_contig479:23854..27542- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CATCGCAATGCTCGGTAAGGCGCAAACAATAGCTAACTTCACTCAACGTA
AGGGCGTACGGATCCATGTTTCTCCAGCTATTCGTCGTAAACAAATCTGG
AGGCTTGATCTATAACCAGGTGAATGCGAAGAGCCTACTTTTCTCACAAC
TCCCAGTGCAGTCCAGTGTCATATCACTGCGGCGTAAATGCACCCGGCGT
TGCGGTTCAGCAGCAGTGCAGGCATTATGCTTTAGTTTTTGTTCTTCACC
TTTATATTGAATACACGGCACACACAAACAACCTAGATCGTGTTCAATGG
AAACAATTTTGCGGTGAGAATCTAGGAGTGAGCCTAAGGCTAACAGTACT
GCCTGTTCTCCATGGAATATATAGGTGCGTATAGAGATCTTGTCGGAATA
TTCTGAACACGAAAGTGCCGGCACAGCACTCAGTGAGATGCGCACGGAGA
TGTGGCCCGCTCCATGGACGTTGCATGTTGCAATCCTTATGGGATTTTGT
GATGTGTGCTTGATCAGTCTATCCATTGTATTCATCAAAAGCAGAACACA
AATAATTGCTCATCTGTACGGTATTGCCGGACGCAGAACACCCGCACATC
AGCTGGGGACGGGAGCACATGTGTATGGTGCTGTGCTGTTGTCCATACGC
AGTGCCTGACCTACTTTTTTTCTCGATATCTCAAGACATGTAAATTTTCA
CGGGTAGTCATAAGACAGTACTCCGATTTTCCTCAATATGCAAGTATACA
GTAAACATGTGTGCTACCGTGCGACAGCATGCCGCCCTGCGAAAGGATTT
GACCCATTCGACAGACGTCGCATTTCCCTACATTTTTGTGTTGGCGGTTG
GTACTTCGGGCTGCAGGTCGTGTGTACCAAAGCCAAAGCGCATTTTTTTA
TGCGCTCATCTATGCCTGTGTGTATATTTTGCTGTCGTGTCTGTAGATTG
GTTGACTTCGGTGTCACGTAAACTTTTACTATATCTAACATTTCGGTACC
TTTAGATGCCACTCAGCACGATAGTGATACTTCGCGATCAATGCCATGTA
TTGCCCTGGTCCCATCTGTCCTTGGCTGCCCGTCACCAGAACTTGTCAGC
TGCAGCACCGCGGCTTACCAGCAACGACTGGCTCCGACTGGGGTCGACCT
TCCACAGCTTGCACGCCATCGCGTCCCAGGTACAGTACGCATTAAGCATG
AAGTTTTACTTGCGTTGGAACTGAAGCGATGAACCCTTGCGAGGACCCTC
TGAGACTCGAGCAGTACGATCCCGCGTACTACGTACAGTGGCGGTGGATA
CCCCTAGTTCATCCTGTGACATGTCAGTAGAGGCAATTGAGTGTTACTCA
GCATCTCAAAATCGAGCACCCAAAATCTCCGCTGTATTTTGTGTCTGTTT
GTCCGTTCTCCCTTGACCGTCCATTAAAGGTTGCACCCGTGCCGTCTTCG
GGCATCGAGAAGCTTGAGACAGACACCTTCAAACTACAAAGCTTTCAGAC
ATTGACAGGAGTGAAGTTTGTCATCACGGCAGAGGCCGGGACCCCGGACC
TGGGTGCCGTCCTACAAGAAATTTACGAGCTATACACCGACTACGTGCTC
AAGGTGTGGACCTACAAACTGGCTCGGAGAAGAGCGCTGGAAAAGTGTCT
TCCAACGATTTCTCGATATATAGCGATGCAATTTAGACAGACGAAGTATC
TGAGTAATCCTCCGAAGTTAGGCAATCTGAAGGCGTCGCCAGATTGGCAG
CACTAACCTTTGATGGGCTGCTAGCGGGGTGTGAATCAGATTGGTACAAA
ACATATAGGAAACAAAGAGACAACCCTGAAAAATCTAATGTCACATGGAG
TTATACCGCATTTGGTAGATGCGCCGCTTTCTATACTATTATTTAAGCGC
GAACACCAGTACAGCAGCCACAGCGGTGGTACGCCAATTTAGAATTGTCC
GTTAAGTTAGGGGCACACCAGGTCACCGTCGCGTATTTACCCGGTTTCTG
TACTTATTTTAGTTTATTACTATAATAAGTGCATGTAGGTGGTCTGAATT
ACCTTTACCCATTTTCTCACGGCATTTTTGTTTTTTTCAAATGAAAATTT
GCACATGAATTAAAATCTGGCCTATAGAGGACCAGTGATAAAAGCCAAAC
AAAGAAAAGACTAGAGATTGATGGCTCCGTAATAAAGTGAGGAGCACGAG
TGCAAAAATTTGAATGAAAATTCGAAAAACGGCGGTCAGAAAATGCCCCA
ACAAGCCTGCACGCAATACTAGATGCGGGGAATTTTTCACAGAAATGTTA
GAAAGAATGGCATGCCGTACTTCTGATCAATTCGTCGGCTACGTACGGTG
ATGTGCTTCTCCGTCATGATAGCATCATTTCGTCCTTGTCGTACCGAACT
CCCAGTGCCGTCGCGTACCCACGTACCGCTCTATCAGCGTAGAATGTTCC
GTTGTCCGTTTTTCGAATATCGATGACGGAAGAGTCGCAAATCGCTGTAC
GGTAGTATTTCCCATCCGTAATCGCTCTTTGACCAATTCTAGGGGAGGCA
GTTGTTGCGCCAATCGCAAGCGAGTTTAGCACGGTGTGAGACTAAGAGCC
GTGGTAGAAACTGTGCTATTCTTTGCTCGTTTGATTCGCCGTGTGTAGGG
GTACCGTTGAACTTGCCGGTTCGAATAGCCATTTTGAGGAACGGCGCTTG
ATTGCGTCAGCAACTTTGCTTTGCTGTCCTCGCACACCGGGAAACTAGAA
GAGGGTAGTCGGCACGACGAAAATGCTTATCAAAACACTAAGTTCCCTTG
AATTCCTCTTCCATCCCCTGCCATCTTTGCGTCACAATCTTTTCTCCTCT
CTCTCTCACGCGGAAACAAAAATGAATGGTGCTTTTTCTCCATTTTACTG
GATGCACGTTTGTGGCGGCTGTTGATGCTGAAACGACCGATGGACGGGCG
GGTGGGCGGAGCAGAATCCATTTTATGAGCTGGAAATGCCCATTCGTTGC
GAGTTGTTCACGTCCTACCTGGAAGAACTGATCGAACGGCATAGTGCGGC
GGGGGCGCCAGGAGGGAAAAAGCCCTCCGTTCAATATTAGGGTTGTGTGT
GCACTTACGAGCTAATGCAGTTGTGCCGGTAAAATACCTGTTGTCTTTGC
TGCTGCGGAAGGGTACGTAGCGAAAAGGAGGAATTGTTGAATGGCTACAT
CGATGGCGTGAGGGCAAGAGAAATTTATTTATTCGCTTGCTGTTGACCGT
GCGCTCTCTAAGCAACGTCTTACTCTTGTGGCTGGGGTAGGGGGATGCGG
GGCAGAGGTGACACGCACTGACCCTCTCTCTCTCTCTCTTATATATATAT
ATATATATATATTCAGGGTCGGTTCCCATGTGCGGCTGATTTCGTTGGTC
TGTGTTGATGATCCAAGGAGTAGTGGCGATCTGAACGCGAAAAGCTTTGT
TCATGTGCAAAACTACGCACGCAACTGTTGTACGCCGTGGTCGGCGGCGG
CGACGGCGGCGGCTGCTGCTGCCGCTGTTTACCTCGAGTATATTTATTTC
AACGCTGGCGCTATTTGATGAATTGGCGGATTTTCACCCACAGTGTTCGA
CTTCCTCGCCATCAATGTCTCGACGCGTCAGACGTCACGAAAATGTTTGT
TCCGTAGAAAAATAATTCCGTGTTGATACATTCAGCCAC
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Coding sequence (CDS) from alignment at H-paniculata_contig479:23854..27542-

>mRNA_H-paniculata_contig479.11861.1 ID=mRNA_H-paniculata_contig479.11861.1|Name=mRNA_H-paniculata_contig479.11861.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=888bp|location=Sequence derived from alignment at H-paniculata_contig479:23854..27542- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTTCTCCAGCTATTCGTCGTAAACAAATCTGGAGGCTTGATCTATAA
CCAGATGTTTCTCCAGCTATTCGTCGTAAACAAATCTGGAGGCTTGATCT
ATAACCAGAACTTGTCAGCTGCAGCACCGCGGCTTACCAGCAACGACTGG
CTCCGACTGGGGTCGACCTTCCACAGCTTGCACGCCATCGCGTCCCAGAA
CTTGTCAGCTGCAGCACCGCGGCTTACCAGCAACGACTGGCTCCGACTGG
GGTCGACCTTCCACAGCTTGCACGCCATCGCGTCCCAGGTTGCACCCGTG
CCGTCTTCGGGCATCGAGAAGCTTGAGACAGACACCTTCAAACTACAAAG
CTTTCAGACATTGACAGGAGTGAAGTTTGTCATCACGGCAGAGGCCGGGA
CCCCGGACCTGGGTGCCGTCCTACAAGAAATTTACGAGCTATACACCGAC
TACGTGCTCAAGGTTGCACCCGTGCCGTCTTCGGGCATCGAGAAGCTTGA
GACAGACACCTTCAAACTACAAAGCTTTCAGACATTGACAGGAGTGAAGT
TTGTCATCACGGCAGAGGCCGGGACCCCGGACCTGGGTGCCGTCCTACAA
GAAATTTACGAGCTATACACCGACTACGTGCTCAAGAATCCATTTTATGA
GCTGGAAATGCCCATTCGTTGCGAGTTGTTCACGTCCTACCTGGAAGAAC
TGATCGAACGGCATAGTGCGGCGGGGGCGCCAGGAGGGAAAAAGCCCTCC
GTTCAATATTAGAATCCATTTTATGAGCTGGAAATGCCCATTCGTTGCGA
GTTGTTCACGTCCTACCTGGAAGAACTGATCGAACGGCATAGTGCGGCGG
GGGCGCCAGGAGGGAAAAAGCCCTCCGTTCAATATTAG
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