mRNA_H-paniculata_contig4781.11847.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4781.11847.1 vs. uniprot
Match: A0A6H5K6L1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L1_9PHAE) HSP 1 Score: 694 bits (1791), Expect = 8.140e-230 Identity = 364/568 (64.08%), Postives = 443/568 (77.99%), Query Frame = 2
Query: 95 MGREKILLWALVAVLSLSIAHGQDNDTCSADSCGISTCAAGYELEVEIDSDSLMISCNPCNEDYYKSGEGAEACEACPDGLVSEVGATTCSLEEGYWRTSNTSTTAYKCPNFDACIGGSDEASYCEEGFEGPLCAVCTDDYYPSGSYECLECTTANSASTIXXXXXXXXXXXXXXXXXIKAAEKMEEKARENGEDKLADNANEAATAKLTSGGSNRGAKVLEFVKKWKDTLLVRFKIIVAHFQVVATFPSVLDVQWPEAFNRYADKVSIVSLDIWGILSQGCYFRSDFLKQLIFTTILPLGIVAVLLALYFRSVRSQTSNPQQRQAAYDRTTGGILLTGFFFYIITSTLVLEAFDCQNFDDGTSYLKADYDMNCDSNRYTFVKWYSIIMVFIFPVGIPLTYLAALYRGRTKINPDPRNPKHGAVVREDDPTIQKTKFLWGTYRPSVYWYECWECVRKLLLTGLLVYFKEGTPTQVVIAMLITLMGLRVLAGLQPYLREDENALAEASLWVTFLTLFVGLLIKAEVATDDGYDEVALGVVLSFMNMAIVGLAGFQLVWTTSMWFREKLG 1798
MGR + L +L S Q N++C+ ++CG+STC G ELEV ++ SL ISCN C E++YK+ EGA+ C AC DGLVSEVGA CSLE G+WRTSNTS Y+CPN DAC+GG+ +YC +GF+GPLCAVC +DYYPSGSYECLEC+ N+A XXXXXXXXXXXXXXXXX AN+AA + + + G+N +KV +FVK+WKDTL+VRFKI+V HFQ+V TFP VLDVQWPEAFNRYADKVS++SLD WG+LSQ C+F+ DFLK+L+FTT+LPLGIVAVL+A Y ++VR++ S R+AA+D T GG+LLTGFFFYI+TSTL++EAFDCQ+FDDG+SYLKAD+ ++C+SN+YTF+ Y+IIM IFP GIP+TYLA LY G+ +INPDP NP+ RE D TI+KTKFLWGTYRP+VY+YE WECVRKL LTGLLVYF+EGT TQVVIAMLITL GLRVLAGLQPY REDEN LAEASLWVTFLTLF GLLIKA+VA +DGYD VALGV+LS MN A+ LA FQ++WTTS F++ G
Sbjct: 1 MGRADVALAGWTILLCFSSVAAQ-NESCTTETCGVSTCEPGSELEVSLEGTSLEISCNLCLENFYKAEEGADPCLACGDGLVSEVGAVVCSLEAGFWRTSNTSDIVYECPNADACVGGATAETYCSDGFKGPLCAVCENDYYPSGSYECLECSGGNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXANDAAASNVMAVGTN--SKVFKFVKQWKDTLVVRFKILVTHFQIVTTFPVVLDVQWPEAFNRYADKVSVISLDFWGLLSQSCWFQPDFLKRLVFTTLLPLGIVAVLMAQYAKTVRTR-STEASRRAAFDNTAGGVLLTGFFFYIVTSTLIMEAFDCQDFDDGSSYLKADFRISCNSNKYTFIYAYAIIMAIIFPAGIPVTYLAVLYLGKERINPDPVNPEVSIKKRESDATIKKTKFLWGTYRPAVYYYEVWECVRKLFLTGLLVYFEEGTSTQVVIAMLITLAGLRVLAGLQPYQREDENNLAEASLWVTFLTLFAGLLIKADVADEDGYDTVALGVILSIMNAALFALAAFQILWTTSQLFKDTCG 559
BLAST of mRNA_H-paniculata_contig4781.11847.1 vs. uniprot
Match: D7G9D7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9D7_ECTSI) HSP 1 Score: 538 bits (1386), Expect = 5.540e-173 Identity = 265/389 (68.12%), Postives = 325/389 (83.55%), Query Frame = 2
Query: 632 KAAEKMEEKARENGEDKLADNANEAATAKLTSGGSNRGAKVLEFVKKWKDTLLVRFKIIVAHFQVVATFPSVLDVQWPEAFNRYADKVSIVSLDIWGILSQGCYFRSDFLKQLIFTTILPLGIVAVLLALYFRSVRSQTSNPQQRQAAYDRTTGGILLTGFFFYIITSTLVLEAFDCQNFDDGTSYLKADYDMNCDSNRYTFVKWYSIIMVFIFPVGIPLTYLAALYRGRTKINPDPRNPKHGAVVREDDPTIQKTKFLWGTYRPSVYWYECWECVRKLLLTGLLVYFKEGTPTQVVIAMLITLMGLRVLAGLQPYLREDENALAEASLWVTFLTLFVGLLIKAEVATDDGYDEVALGVVLSFMNMAIVGLAGFQLVWTTSMWFREKLG 1798
KA+ +EEKARE+ +D AN+AA + + + G+N +KV +F+K+WKDTL+VRFKI+V HFQ+V TFP VLDVQWPEAFNRYADKVS++SLD WG+LSQ C+F+ DFLKQL+FTT+LPLGIVAVL+A Y ++VR++ S R+AA+D T GG+LLTGFFFYI+TSTL++EAFDCQ+FDDG+SYLKAD+ ++C SN+YTF+ Y+IIM IFP GIPLTYLA LY G+ +INPDP +P+ RE D TI+KTKFLWGTYRP+VY+YE WECVRKL LTGLLVYF++GT TQVVIAMLITL GLRVLAGL+PY REDEN LAEASLWVTFLTLF GLLIKA+VA +DGYD VALGV+LS MN A+ LA FQ++WTTS +F+EK G
Sbjct: 20 KASSTLEEKAREHDDD-----ANDAAASNVMTVGTN--SKVFKFIKQWKDTLVVRFKILVTHFQIVTTFPVVLDVQWPEAFNRYADKVSVISLDFWGLLSQSCWFQPDFLKQLVFTTLLPLGIVAVLMAQYAKTVRTR-STEASRRAAFDNTAGGVLLTGFFFYIVTSTLIMEAFDCQDFDDGSSYLKADFRISCGSNKYTFIYVYAIIMAIIFPAGIPLTYLAVLYLGKERINPDPVHPEVSIKKRESDATIKKTKFLWGTYRPAVYYYEVWECVRKLFLTGLLVYFEQGTSTQVVIAMLITLAGLRVLAGLRPYQREDENNLAEASLWVTFLTLFAGLLIKADVADEDGYDTVALGVILSIMNAALFALAAFQILWTTSQFFKEKCG 400
BLAST of mRNA_H-paniculata_contig4781.11847.1 vs. uniprot
Match: A0A836CJ54_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ54_9STRA) HSP 1 Score: 300 bits (767), Expect = 1.030e-81 Identity = 181/535 (33.83%), Postives = 274/535 (51.21%), Query Frame = 2
Query: 287 YKSGEGAEACEACPDGLVS-EVGAT--TCSLEEGYWRTSNTSTTAYKCPNFDACIGGSDEASYCEEGFEGPLCAVCTDDYYPSGSYECLECTTANSASTIXXXXXXXXXXXXXXXXXIKAAEKMEEKARENGEDKLADNANEAATAKLTSGGSNRG---AKVLEFVKKWKDTLLVRFKIIVAHFQVVATFPSVLDVQWPEAFNRYADKVSIVSLDIWGILSQGCYFRSDFLKQLIFTTILPLGIVAVLLALY-FRSVRSQTSNPQQ------RQAAYDRTTGGILLTGFFFYIITSTLVLEAFDCQNFD------DGTSYLKADYDMNCDSNRYTFVKWYSIIMVFIFPVGIPLTYLAALYRGRTKINPDPRNPKHGAVVREDDPTIQKTKFLWGTYRPSVYWYECWECVRKLLLTGLLVYFKEGTPTQVVIAMLITLMGLRVLAGLQPYLREDENALAEASLWVTFLTLFVGLLIKAEVATDDGYDEVALGVVLSFMNMAIVGLAGFQLVWTTSMWFREKLGWTDEENEDEAGI 1834
Y+ G C ACPDG G T T SLE GYWR T +CP D+C C+ A TI K + D A +A + T + GG++ A+ + ++K+ TL+VRFKI+V HFQ+VA P++L V +P++F + +++ +LD WG+LS GC+F +FL +L+F+T+LPL I+A + ++ R V ++ R ++D + LLT F FY++ ST VL+ FDC + SYL+ADY ++CDS Y + Y+IIM ++P+G+P Y + L R +++P + K VR+ D ++KT+FLWG+YRP +WYE W + KLLL+GLLVYF++GTPTQ +A+L+TL+ + + + P+ R DEN LAE + W T LTL LLI A DG + LG +LS +N+ ++ LA QL W+ S W + +G D + + + I
Sbjct: 45 YEDSSGQ--CAACPDGATCITAGQTIDTLSLEAGYWRGGPT-LDIQECPRMDSCRS----------------------------------CSRGGRAYTIIVIVVFCAALAAVLLLLYKGLAR----------DVQAGDATLSVTQSDSFGGAHSASAVARAVAWLKQRSATLMVRFKILVTHFQIVAGLPALLRVNFPQSFTALTNTLNVFNLDFWGLLSSGCFFEVNFLNKLLFSTLLPLAIIAAIFGVHGARCVLARGRGSGSGGSALWRHGSWDASLQAALLTLFMFYVVASTTVLQTFDCDTVQLSSATGETASYLRADYSVDCDSAAYRRSRVYAIIMTAVYPIGVPFLYASLLLLSRQRLDPVRADAKRSMEVRDADAGVRKTRFLWGSYRPRAFWYEVWLTLYKLLLSGLLVYFRQGTPTQTTVALLLTLVAMWLQTLVAPFTRRDENRLAECAYWATILTLIAALLISASDTGSDGVNMALLGAILSIINLLVIVLAVVQLFWSASAWLYDLIGRDDADEKPNSNI 532
BLAST of mRNA_H-paniculata_contig4781.11847.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 231 bits (588), Expect = 4.050e-58 Identity = 155/512 (30.27%), Postives = 239/512 (46.68%), Query Frame = 2
Query: 254 MISCNPCNEDYYKSGEGA-EACEACP---DGLVSE-------------------VGATTCSLEEGYWRTSNTSTTAYKCPNFDACIGGSDEAS-YCEEGFEGPLCAVCTDDYYPSGSYECLECTTANSASTIXXXXXXXXXXXXXXXXXIK-AAEKMEEKARENGEDKLADNANEAATAKLTSGGSNRGAKVLEFVKKWKDTLLVRFKIIVAHFQVVATFPSVLDVQWPEAFNRYADKVSIVSLDIWGILSQGCYFRSDFLKQLIFTTILPLGIVAVLLALYFRSVRSQTSNPQQRQAAYDRTTGGILLTGFFFYIITSTLVLEAFDCQNFDDGTSYLKADYDMNCDSNRYTFVKWYSIIMVFIFPVGIPLTYLAALYRGRTKINPDPRNPKHGAVVREDDPTIQKTKFLWGTYRPSVYWYECWECVRKLLLTGLLVYFKEGTPTQVVIAMLITLMGLRVLAGLQPYLREDENALAEASLWVTFLTLFVGLLIKAEVATDDGYDEVALGVVL 1714
+ +C P Y SG+ EAC C DG V V T S++ GYWR +N+ST C N DAC+GG A+ YC EG+EGP CA+C+DDY + C +C N A I + A +++ N G + +K++ L KI+V +Q+V F S +V +P+ + R+ + + + + DI +LS GC DF +L+ +TI P+ + L A Y R N Q +DR +LL F Y S++V + F C + G YL+ADY + CDS+++ + Y+ M+ ++PVGIP Y A L R R + DP RED P + LW YRPSVY+YE EC R++LLTGL+V+ T Q+ I +++T++ + L+PY + + ++ S V F++++V LL+K +V+ + G + VL
Sbjct: 502 VFNCAPDTFLNYTSGDALDEACSGCQTTCDGCVQPPVVPLCSDVIPHSRSDGGLVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCP--NRAGGILLATALAVIGLFTVVAVVSYVAWRVD---------------------------PNTGCAMAGHLKRYLP--LQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDG-------REDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVL 975
BLAST of mRNA_H-paniculata_contig4781.11847.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 218 bits (556), Expect = 1.330e-53 Identity = 143/521 (27.45%), Postives = 241/521 (46.26%), Query Frame = 2
Query: 206 CAAGYELEVEIDSDSLMISCNPCNED----YYKSGEGAEACEACPDGLVSEVGATTC---SLEEGYWRTSNTSTTAYKCPNFDACIGGSDEAS-YCEEGFEGPLCAVCTDDYYPSGSYECLECTTANSASTIXXXXXXXXXXXXXXXXXIKAAEKMEEKARENGEDKLADNANEAATAKLTSG--GSNRGAKVLEFVKKWKDTLLVRFKIIVAHFQVVATFPSVLDVQWPEAFNRYADKVSIVSLDIWGILSQGCYFRSDFLKQLIFTTILPLGIVAVLLALYFRSVRSQTSNPQQRQAAYDRTTGGILLTGFFFYIITSTLVLEAFDCQNFDDGTSYLKADYDMNCDSNRYTFVKWYSIIMVFIFPVGIPLTYLAALYRGRTKINPDPRNPKHGAVVREDDPTIQKTKFLWGTYRPSVYWYECWECVRKLLLTGLLVYFKEGTPTQVVIAMLITLMGLRVLAGLQPYLREDENALAEASLWVTFLTLFVGLLIKAEVATDDGYDEVALGVVLSFMNMAIV 1738
C AG V D CN C + G A C D S+ G T S++ G+WR S +ST C + DAC+GG AS YCEEG+EGP C +C+D Y S+ C +C+ NSA I A + +TSG G R ++E V ++ L KI++ +Q++ F SV +V +P+ + D + + + D+ +LS GC +F +L+ +TI P+ + +L Y + R P++ +++ +LL FF Y S+ + AF C + D YL+ADY + C+S+ + ++ Y+ M+ I+ VGIP Y L++ R + + + RE+ P ++ LW Y+P+V++YE EC R++LL G++V+ T Q+ + +LI + GL PY + ++ V FL+++V LL+K +V+ + + VL +++ ++
Sbjct: 995 CPAGTFRNVTGSVDHFEAICNGCETTCDGCVFAEGSLAPICTEVMDHSTSDGGNVTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSE-NSAGGIAVAVVLALLIVFLAV---------------------------AVVSYVTSGEVGMGRKGGIVELVTRYIP--LQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPD-------REEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMI 1478
BLAST of mRNA_H-paniculata_contig4781.11847.1 vs. uniprot
Match: D7FRV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV1_ECTSI) HSP 1 Score: 213 bits (543), Expect = 1.490e-52 Identity = 155/543 (28.55%), Postives = 248/543 (45.67%), Query Frame = 2
Query: 257 ISCNPCN-EDYYKS--GEGAEACEACP---DGLVSEV-----------------GATTCSLEE-----GYWRTSNTSTTAYKCPNFDACIGG-SDEASYCEEGFEGPLCAVCTDDYYPSGSYECLECTTANSASTIXXXXXXXXXXXXXXXXXIKAAEKMEEKARENGEDKLADNANEAATAKLTSGGSNRGAKVLEFVKKWKDTLLVR-FKIIVAHFQVVATFPSVLDVQWPEAFNRYADKVSIVSLDIWGILSQGCYFRSDFLKQLIFTTILPLGIVAVLLALYFRSVRSQTSNPQQRQAAYDRTTGGILLTGFFFYIITSTLVLEAFDCQNFDDGTSYLKADYDMNCDSNRYTFVKWYSIIMVFIFPVGIPLTYLAALYRGRTKINPDPRNPKHGAVVREDDPTIQKTKFLWGTYRPSVYWYECWECVRKLLLTGLLVYFKEGTPTQVVIAMLITLMGLRVLAGLQPYLREDENALAEASLWVTFLTLFVGLLIKAEVATDDGYDEVALGVVLSFMNMAIVGLAGFQLVWTTSMWFREKL 1795
I C P + DYY+S G C+ CP DG+ V GA T S+E+ GYWR + T+TT C N DAC+GG + EA YC EG+ GP CA+CT++Y + ++EC +C++ + + A A A L S G + KD + R KI+V +Q++ F V +V +P + R+ D + +++ DI ++S GC DF L+ TI P+ +V VL A Y + + + + + +LL F Y S+ V F C D SYL+ADY + C S ++ ++ +++ MV ++PVGIPL Y LY R + K G+ R+ P + LW Y P Y+ E EC R++LLTG++V+ + Q+ I++L+T L + L P+ + ++ + F+T+FV LL+K +V+ + + +L N+ + G A ++VW MW K+
Sbjct: 526 IECPPGSFVDYYESEGGRYEAVCDGCPAADDGITMGVENLVPTCTETLENTRSDGANT-SIEDIRIDPGYWRATTTTTTVLACYNADACLGGITGEAGYCREGYYGPYCAICTENYGRTMAFECTKCSSGEGVAV---------GVIFVSALAVGGA---------------------ALVAYLVSN-EREGXXXXXLIVLVKDKVSFRSLKIVVVVWQILTQFSDVANVTYPHIYQRFLDVIDVLNFDIGWVISAGCVVDFDFHDHLLTATIGPIIVVGVLGATYAAASYRNRGSDEAIARVFRKHVSAVLLVTFLVYSSVSSTVFRMFVCDPLADSNSYLRADYSIQCSSTKHRALQIFAVFMVLLYPVGIPLFYGILLYNTREAL-------KDGSC-RQAHPQAKTISALWEPYTPKRYYNEVVECGRRMLLTGVVVFIYPNSAAQIAISLLMTFAFLVISEVLAPFASAWDCWVSRCGHILIFVTMFVALLLKVDVSDEREGSQRLFAGILVVTNLVLFGAAVAEMVW---MWCAVKM 1025
BLAST of mRNA_H-paniculata_contig4781.11847.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE) HSP 1 Score: 214 bits (545), Expect = 3.340e-52 Identity = 151/526 (28.71%), Postives = 248/526 (47.15%), Query Frame = 2
Query: 203 TCAAGYELEVEIDSDSLMISCNPC---NEDYYKSGEGAEACEACP---DGLVSEVGATTCS---LEEGYWRTSNTSTTAYKCPNFDACIGG-SDEASYCEEGFEGPLCAVCTDDYYPSGSYECLECTTANSASTIXXXXXXXXXXXXXXXXXIKAAEKMEEKARENGEDKLADNANEAATAKLTSGGSNRGAKVLEFVKKWKDTLLVRFKIIVAHFQVVATFPSVLDVQWPEAFNRYADKVSIVSLDIWGILSQGCYFRSDFLKQLIFTTILPLGIVAVLLALYFRSVRSQTSNPQQRQAAYDRTTGGILLTGFFFYIITSTLVLEAFDCQNFDDGTSYLKADYDMNCDSNRYTFVKWYSIIMVFIFPVGIPLTYLAALYRGRTKINPDPRNPKHGAVVREDDPTIQKTKFLWGTYRPSVYWYECWECVRKLLLTGLLVYFKEGTPTQVVIAMLITLMGLRVLAGLQPYLREDENALAEASLWVTFLTLFVGLLIKAEVATDDGYD--EVALGVVLSFMNMAIVGL 1744
+C G L+ +D D C+ C N D+ S E + C D SE G TT L GYWR +N S C N DAC+GG +++ ++C+ G+EGP C+VC++ Y S ++ C EC + I + +ME G+ RG + VK+ L KI+V +Q++ F SV +V +P+ + R+ D V+I++ D+ I S GC DF +L+ TI PL +A+L Y + R + + Q + +LL F Y S V ++F C++ DD YL+ADY + CDS+ + + ++ IM+ ++PVGIPL Y LY+ R + + A R+ P +Q LW Y+P ++YE ECVR++ LTG++V+ T QV + ++I + L PY+ + + +++ + F +++ LL K +V+ D+ D EV GV+++ +V +
Sbjct: 1258 SCENGMYLD-SVDGDRYQTVCDGCPVNNSDWIVSVENGDRVPICVVQLDHTRSEGGDTTIETLELSSGYWRATNDSANVLACYNEDACVGGMTNDPAFCQRGYEGPYCSVCSEGYSMSLAFTCTECVDDHGGIAIMVVVGVFVLGAAIALCMHLVSGEME--------------------------GARRGV-IHRVVKRLP---LQSIKIVVVVWQILTQFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSE------DAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVS-DERADSQEVFAGVLVAAHACMVVAV 1745
BLAST of mRNA_H-paniculata_contig4781.11847.1 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE) HSP 1 Score: 210 bits (535), Expect = 1.180e-51 Identity = 157/516 (30.43%), Postives = 253/516 (49.03%), Query Frame = 2
Query: 218 YELEVEIDSDSLMISCNPCNED-------YYKSGEGAEACEACPDGLVSEVGATTCS---LEEGYWRTSNTSTTAYKCPNFDACIGGSDEASYCEEGFEGPLCAVCTDDYYPSGSYECLECTTANSASTIXXXXXXXXXXXXXXXXXIKAAEKMEEKARENGEDKLADNANEAATAKLTSGGSNRGAKVLEFVKKWKDTLLVRFKIIVAHFQVVATFPSVLDVQWPEAFNRYADKVSIVSLDIWGILSQGCYFRSDFLKQLIFTTILPLGIVAVLLALYFRSVRSQTSNPQQRQAAYDRTTGGILLTGFFFYIITSTLVLEAFDCQNFDDGTSYLKADYDMNCDSNRYTFVKWYSIIMVFIFPVGIPLTYLAALYRGRTKINPDPRNPKHGAVVREDDPTIQKTKFLWGTYRPSVYWYECWECVRKLLLTGLLVYFKEGTPTQVVIAMLITLMGLRVLAGLQPYLREDENALAEASLWVTFLTLFVGLLIKAEVATDDGYDEVALGVVLSFMNMAI 1735
Y+ E E DS ++C C+ D + C +G + TT + L+EGY+RTS S +C AC GG+D +YC +G+EGP C+VC D Y P +Y+C EC+ + S + XXXXXXXXXXX + AA+ + +G+D + D A T K R ++ FV L KI+V +Q++ F ++ +PE + + + ++ V+LDI ILS C +DF +L+ TI P+ ++A+L + + + +A ++ L FF Y S V + F C DDG SYL+ADY + CD+ RY + Y+ +MV ++P+GIP T+ L R + R+ +Q LW Y+PS Y+YE E VR+++LTG+ V+ G+ Q+ + +L+ ++ L + L P+ ++ + AL V +++V LL+K V+ + A VVL N+ +
Sbjct: 526 YDKEAEDDSCRFELACARCSADCDAIPSSVTMADSTIPVCVESMEGTKASSSGTTVATLDLQEGYYRTSAESQVVVECYLTSACAGGTDPKNYCADGYEGPYCSVCADGYAPGTAYQCHECSGTSMGSAVGVAXXXXXXXXXXXA--VVAADLVRVV---DGDDSIKD----ARTLK------GRLSRFHAFVVTAFP--LTTVKIVVVAWQIITQFGAIAGFVYPEEYQDFLNALTPVNLDIGFILSYSCVVITDFFDRLLIATIGPVVVLALLALTFVVGRKRNIDSEAAVRAVKNKHLSAALFVMFFIYSSVSFTVFQTFVCDTLDDGVSYLRADYSLTCDTPRYGAFRGYAAVMVCVYPIGIPATFAWLLGSNRQDLQ---------KADRDRLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQMAVVLLLAVVFLFISESLSPFTKKIDMALYRWGNGVVLASIYVALLLKVNVSEEGSETLSAFVVVLILANVCM 1015
BLAST of mRNA_H-paniculata_contig4781.11847.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 205 bits (521), Expect = 1.350e-49 Identity = 154/572 (26.92%), Postives = 258/572 (45.10%), Query Frame = 2
Query: 170 DTCSADSCGISTCAAGYELEVE-IDSDSLMISCNP-CNEDYYKSGEGAEA----CEACPDG-----------------LVSEVGATTCS---LEEGYWRTSNTSTTAYKCPNFDACIGG-SDEASYCEEGFEGPLCAVCTDDYYPSGSYECLECTTANSASTIXXXXXXXXXXXXXXXXXIKAAEKMEEKARENGEDKLADNANEAATAKLTSGGSNRGAKVLEFVKKWKDTLLVRFKIIVAHFQVVATFPSVLDVQWPEAFNRYADKVSIVSLDIWGILSQGCYFRSDFLKQLIFTTILPLGIVAVLLALYFRSVRSQTSNPQQRQAAYDRTTGGILLTGFFFYIITSTLVLEAFDCQNFDDGTSYLKADYDMNCDSNRYTFVKWYSIIMVFIFPVGIPLTYLAALYRGRTKINPDPRNPKHGAVVREDDPTIQKTKFLWGTYRPSVYWYECWECVRKLLLTGLLVYFKEGTPTQVVIAMLITLMGLRVLAGLQPYLREDENALAEASLWVTFLTLFVGLLIKAEVATDDGYDEVALGVVL----SFMNMAIVGLAGFQLVWTTSMWFREK 1792
D S D G + G L VE I + C+P DY SG EA CE DG + S G T +E GYWR S +S + C N DAC+GG + A YC +G+EGP CAVC+D Y ++ C C+ + A+ A + ++ S A++ +++ L KI++ +Q++ F SV +V +P+ + R+ D + + + D+ +LS GC F DF +L+ +T+ P+ + L Y +V + Q +++ +LL F Y S + +AF C+ +DGT+YL+ADY ++CDS+++ + Y+ MV ++ VGIP Y L+R R + K RE T LW Y+PSV++YE EC R++LL G++V+ T Q+ I +++ + V GL P+ + + L V F+++++ LL+K +V+ + + +VL + M +A++ F L W+ + R++
Sbjct: 710 DNISDDQGGAAVSNIGSLLSVENITFSGNVFDCDPGMYLDYNASGNPYEAACGGCETACDGCFFEPPVPPTCTDVMEHITSAGGTVTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFACTRCSGGAGRIALAAVLAVVVLCVAFAV------------------------ASYAMSGRVGDVRSGVVARLGQYIP------LQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVL-------KDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVM-TETFVLTWSLKVEQRQE 1243
BLAST of mRNA_H-paniculata_contig4781.11847.1 vs. uniprot
Match: A0A7S2VW84_9STRA (Hypothetical protein (Fragment) n=2 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VW84_9STRA) HSP 1 Score: 202 bits (515), Expect = 1.040e-48 Identity = 139/489 (28.43%), Postives = 235/489 (48.06%), Query Frame = 2
Query: 314 CEACPDG-LVSEVGATT--CSLEEGYWRTSNTSTTAYKCPNFDACIGGSDEA-----------SYCEEGFEGPLCAVCTDDYYPSGSYECLECTTANSASTIXXXXXXXXXXXXXXXXXIKAAEKMEEKARENGEDKLADNANEAATAKLTSGGSNRGAKVLEFVKKWKDTLLVRFKIIVAHFQVVATFPSVLDVQWPEAFNRYADKVS-IVSLDIWGILSQGCYFRSDFLKQLIFTTILPLGIVAVLLALYFRSVRSQTSNPQQRQAAYDRTTGGILLT-GFFFYIITSTLVLEAFDCQNF-DDGTSYLKADYDMNCDSNRYTFVKWYSIIMVFIFPVGIPLTYLAALYRGRTKINPDPRNPKHGAVVREDDPTIQKTKFLWGTYRPSVYWYECWECVRKLLLTGLLVYFKEGTPTQVVIAMLITLMGLRVLAGLQPYLREDENALAEASLWVTFLTLFVGLLIKAEVATDDGYDEVALGVVLSFMNM 1729
C CP+G L E G T L++GYWR+S+ S+ +C AC+ + C +G GPLC VC D+ S + EC +C + + ++ +K +E++ E N + + +L + +++ + K+W+ +FKI+ + +Q+V VL +++P+ F + VS I +L + C +F L TI PL +V +L+AL + S+P+ R+ R T ILLT + + T + E F+C+ F DD T YL +D ++CD+N + + + Y+ +M+ +P+G PL Y L++ R + + R+ D K+ FLW Y S +W++ ++C R+LL T L++ +G +QVV AML++ + +P++RE +N LA AS FLTLF LL K V D+ YD+ G +L +N+
Sbjct: 878 CLPCPEGTLCDEAGVTVENLPLKKGYWRSSSNSSNVIQCYTESACLHPDXXXXXXXXXXXXADNQCADGHTGPLCNVCMKDFVKSTTGECFQCQPSTTGGSLTVSVLVVVVVPLIILWFVKRRRAVEKETAER-------NRVLSISEQLNAMRNDKDNRF----KRWRT----KFKILTSFYQIVTQMEGVLGIRYPQIFENFTRFVSRIANLSFLHVARVDCMMEVNFYTTLAMMTITPL-VVGLLIALVGFLLFKLASDPE-RKREIQRDTDAILLTLSYLVFASVCTAIFETFNCKRFGDDPTLYLVSDQSLSCDTNDHEWWQVYAFVMMLFYPLGTPLLYSWLLWKDRELLKDEEE--------RDKDENAGKSAFLWDQYSASFWWFDVFDCARRLLQTSFLIFVFKGKASQVVFAMLVSAVSSSFFIHWRPFIRESDNTLAIASQCSIFLTLFYALLTKVGVDKDEDYDQNVFGALLIIINL 1341 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4781.11847.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4781.11847.1 >prot_H-paniculata_contig4781.11847.1 ID=prot_H-paniculata_contig4781.11847.1|Name=mRNA_H-paniculata_contig4781.11847.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=893bp MGREKILLWALVAVLSLSIAHGQDNDTCSADSCGISTCAAGYELEVEIDSback to top mRNA from alignment at H-paniculata_contig4781:1474..14495- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4781.11847.1 ID=mRNA_H-paniculata_contig4781.11847.1|Name=mRNA_H-paniculata_contig4781.11847.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=13022bp|location=Sequence derived from alignment at H-paniculata_contig4781:1474..14495- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4781:1474..14495- >mRNA_H-paniculata_contig4781.11847.1 ID=mRNA_H-paniculata_contig4781.11847.1|Name=mRNA_H-paniculata_contig4781.11847.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5358bp|location=Sequence derived from alignment at H-paniculata_contig4781:1474..14495- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |