mRNA_H-paniculata_contig11848.1185.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig11848.1185.1
Unique NamemRNA_H-paniculata_contig11848.1185.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig11848.1185.1 vs. uniprot
Match: A0A151T1X7_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T1X7_CAJCA)

HSP 1 Score: 241 bits (614), Expect = 1.930e-68
Identity = 175/595 (29.41%), Postives = 268/595 (45.04%), Query Frame = 1
Query:    1 LKRLRSDQGGEFTGEAFRQFRVENGTKQNISAAYTPQQNDVMEHSWHSVFEMTRSNMITAKMCRRYWAEAARATVYC*NHAPTRPHTGGTPYEKWHGTTPKLDHLRVFGYMTYMILQSQQRYKLDGKAWVGVFLRYDEDSSSYRIYNPENKSVQLSRNVRFDEEDFVTGHRGQLE---------HDETRDMKGPFSALSVTPAVTRSHARGERGDLSNTEKPTSASENREEDSGAAVGVAKVQDTSNPTGAVSEEEPKSAAEALKSPEADKWSAAMEEEWRVLVKNETWESEDRGRLLVGRKTICTKWIFKRKLKEDGSVARDK--------------------------EAVGEVAVQLTTES---------------------SLMYASTGTRLDIA*MVHQAVCGMGNPCREYFSTRKRIFRYLTTVPNLGITFGGKSNGHVLEGFVDADYAEDVEDRKSTTGYFFKLNGGAICWCSRKQQLVTWSSTEGECVAAGEAGKETVYLGKSIGFGCRGN---TTLFGDNKLATNLIKGSGAHWRTKHIGVRWNGIREWIREGILALKYVHTSDQLNDIFTKGLSRVKFQRLRNLL 1608
            +K  RSD+G E+T   F +F  + G ++ ++ AYTPQQN V E    +V EM RS +    +   +WAEA    VY  N  PT+     TP E W G  P   HLRVFG + Y+ +  ++R+KL+ K   G+FL Y   S  YR+YN + K + +SR++  DE         ++E            T  ++     + ++P   R   + E     +T +   +             +  + +T N    ++  EP S  EA      + W  AMEEE +++ KN TWE  D      G+  I  KW++K KL  DG++ + K                          + +  +   L T                       SL+Y  T TR DI          M  P + ++ T KRI RYL      GI +   +   ++ G+ D+D+A  ++D KST+GY F L  G   W S+KQ  V  S+ E E +AA E   + ++L + +          T ++ DNK A  + K    H RTKHI ++++ IRE      + L+Y    DQ+ DIFT  L RVKF++L+ +L
Sbjct:   32 IKVRRSDRGNEYTSREFDKFCEDEGIERQLTVAYTPQQNGVSERKNRTVMEMARSMLKEKGLPNTFWAEAVYTAVYLLNRCPTKAVRDKTPIEAWSGKKPSAKHLRVFGSICYIHVPDEKRHKLEDKTVRGIFLGYSSQSKGYRVYNLQTKKLTISRDIEVDENATWNWEEERIEKKTIYMPINQPTTSSLEDNNQDIVISPESPRIVPQQEESSPESTPRRVRS-------------LVDIYETCN----LAILEPGSFEEAANQ---EVWVKAMEEEIKMIEKNNTWELVDCPH---GKDIIGVKWVYKTKLNPDGTIQKHKARLVAKGYSQQPGVDYNETFAPVARLDTIRALITPLVTNEKLQKVDGAPEADASRYRSLVGSLLYL-TATRPDIMYATSLLSRFMQKPSQIHYGTGKRILRYLQGTRKFGIWYKTMTKSRMI-GYTDSDWAGSIDDMKSTSGYAFSLRSGFFSWASKKQATVAQSTAEAEYIAAAETTSQAIWLRRILEEMSEQQDRLTLIYCDNKSAIAMAKNPVHHQRTKHIAIKYHFIREAETTKQIQLEYYSIEDQVADIFTTALPRVKFEQLQTML 601          
BLAST of mRNA_H-paniculata_contig11848.1185.1 vs. uniprot
Match: A5BBA3_VITVI (Integrase catalytic domain-containing protein n=3 Tax=Vitis vinifera TaxID=29760 RepID=A5BBA3_VITVI)

HSP 1 Score: 211 bits (537), Expect = 3.900e-56
Identity = 167/605 (27.60%), Postives = 264/605 (43.64%), Query Frame = 1
Query:    1 LKRLRSDQGGEFTGEAFRQFRVENGTKQNISAAYTPQQNDVMEHSWHSVFEMTRSNMITAKMCRRYWAEAARATVYC*NHAPTRPHTGGTPYEKWHGTTPKLDHLRVFGYMTYMILQSQQRYKLDGKAWVGVFLRYDEDSSSYRIYNPENKSVQLSRNVRFDEEDFVTGHRGQLEHDETRDMKGPFSALSVTPAVTRSHARGERGDLSNTEKPTSASENREEDSGAAVGVAKVQDTSNPTGAVSEEEPKSAAEALKSPEADKWSAAMEEEWRVLVKNETWESEDRGRLLVGRKTICTKWIFKRKLKEDGSVARDK---------------------------------------------------------------EAVGEVAVQLT-----TESSLMYASTGTRLDIA*MVHQAVCGMGNPCREYFSTRKRIFRYLTTVPNLGITFGGKSNGHVLEGFVDADYAEDVEDRKSTTGYFFKLNGGAICWCSRKQQLVTWSSTEGECVAAGEAGKETVYLGKSIG-FGCRGN--TTLFGDNKLATNLIKGSGAHWRTKHIGVRWNGIREWIREGILALKYVHTSDQLNDIFTKGLSRVKFQRLRN 1602
            +++++S+ G E+T E F +F VE G +  ++  YTPQQN V E    S+ EMTR  +   ++ ++ WAE A   V+  N  PTR     TP+E W G  P L +LR FG + +  +   +R KLD KA  GVF+ Y   S +YRI+ P+N  + +S++V+F E+        Q   +E+  M+ P         +     RG +                         ++ V + SN    V+  EP    EA K    DKW  AM+EE R++ KN+TW+  DR +    RK I  +WI++ KL  DGSV + K                                                               + + E   ++      T+  LM     TR DI   V      M      +F   +RI RY+    N GI +    N   L G+ ++D+A  ++D +ST G+ F        W S+KQ ++  S+ E E VAA     + +++ K +     + N  T +  DN+ A  +   S  H +TKH  +++  +RE   +G + L Y  T DQ+ ++ TK L + +F+ LR+
Sbjct:  242 MQKIKSNNGKEYTNEIFDKFYVEAGIEHQLTTPYTPQQNGVSERKNRSIMEMTRCMLHEKELPKKLWAETANTVVFLLNRLPTRVLQKKTPFEAWFGYKPDLQNLRTFGCLCFSYVPQVKRDKLDKKAKPGVFIGYSNSSEAYRIFQPQNGKILVSKDVKFMED-------RQWNCEESIKMQLPEVPRYFDEDIDDVPVRGTKS------------------------LSDVYERSN----VAVFEPVEFEEAEKD---DKWIEAMKEELRMIEKNDTWDLVDRPQ---HRKVIGVEWIYRTKLNADGSVNKYKARLVVKGYSQAPNAWYXRIDEHLQSLGFDKSPSEATLYVKGTDANLIVVSVYVDDLLVTSSNEKLIKEFKAEMLKVFEMTDLGLMSYFLATRPDIMFSVSLLSRFMHCASEVHFQAAERIVRYIKGTTNYGIKYSYCQN-FKLHGYSNSDWAGSIDDMRSTIGFCFSFGSEIFSWSSKKQDVIAQSTXEXEYVAANATVNQAIWIRKILADLHMKQNEPTQIHVDNQTAIAISNDSVFHGKTKHFKIKFYHLREEPNDGEIKLLYCKTEDQIANVLTKALPKARFETLRS 804          
BLAST of mRNA_H-paniculata_contig11848.1185.1 vs. uniprot
Match: H3H7T3_PHYRM (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7T3_PHYRM)

HSP 1 Score: 203 bits (517), Expect = 8.420e-55
Identity = 167/577 (28.94%), Postives = 249/577 (43.15%), Query Frame = 1
Query:    1 LKRLRSDQGGEFTGEAFRQFRVENGTKQNISAAYTPQQNDVMEHSWHSVFEMTRSNMITAKMCRRYWAEAARATVYC*NHAPTRPHTGGTPYEKWHGTTPKLDHLRVFGYMTYMILQSQQRYKLDGKAWVGVFLRYDEDSSSYRIYNPENKSVQLSRNVRFDEEDFVTGHRGQ-------LEHDETRD------MKGPFSALSVTPAVTRSHARGERGDLSNTEKPTSASENREE------------------DSGAAVGVAKVQD------------TSNPTGAVSEEEPKSAAEALKSPEADKWSAAMEEEWRVLVKNETWESEDRGRLLVGRKTICTKWIFKRKLKEDGSVARDKEAVGEVAVQLTTESSLMYASTGTRLDIA*MVHQAVCGMGNPCREYFSTRKRIFRYLTTVPNLGITFGGKSNGHVLEGFVDADYAEDVEDRKSTTGYFFKLNGGAICWCSRKQQLVTWSSTEGECVAAGEAGKETVYLGK---SIGFGCRGNTTLFGDNKLATNLIKGSGAHWRTKHIGVRWNGIREWIREGILALKYVHTSDQLNDIFTKGLSRVKFQR 1593
            +K LRSD GGE+          E   KQ  +  Y PQQN + E    ++ EMTR  +  + M + YW EA        N  P       +P++      P+L+H+RVFG   Y  +  Q R KLD      VFL Y +   +YR+ +P + S+ +SR+VRF E   VT  + +       +++DE  +      +   FS     P        G  G +      T   E  EE                    G   G   + D            T +  G    E   S  E ++S   D+W  AME E + L  + TW+  D   +   +KTI  KW+F+ K    G + + K  +  VA   T    + Y  T                                      P+LG+ F G + G ++ G+ DA++A D++ R+STTGY F LNG AI W S++Q  V  SSTE E +A   A +E V+L +    +G  C G TT+F DN+    L K    H RTKHI ++++ +RE + + ++ L+Y  T +   D FTK L+R K ++
Sbjct:   37 VKVLRSDNGGEYCNAGMVALCDEKTIKQEFTVPYNPQQNGMAERMNRTLVEMTRCMLEESGMDKSYWCEAIMTAADIRNVLPNTSSPHASPFQLVFKRAPRLEHMRVFGTECYAHVTKQNRKKLDNSGIKCVFLGYAKQHKAYRLLDPSDGSIVISRSVRFAEAPPVTMAKTRNQEVIDIIDNDEEEERTEEPSVDDGFSTPPTRPLHEPEEHSGPTGSVPTRGSSTPGREGEEEWMVRPARKRRGVVRYQAEFPGTRRGEFNLDDYEAEFDSLYCFLTEDDDG----ERAVSYDEVMRSKYKDEWLRAMESEMKSLENHRTWKLVD---MPSDKKTIGCKWVFRIKRDPSGKIIKFKARL--VAKGFTQRPGVDYTET------------------------------------FAPDLGLVFNGGTKGELI-GYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTIFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMSADRFTKALARPKHRQ 567          
BLAST of mRNA_H-paniculata_contig11848.1185.1 vs. uniprot
Match: A0A2N9G770_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9G770_FAGSY)

HSP 1 Score: 206 bits (525), Expect = 1.060e-53
Identity = 188/628 (29.94%), Postives = 266/628 (42.36%), Query Frame = 1
Query:    1 LKRLRSDQGGEFTGEAFRQFRVENGTKQNISAAYTPQQNDVMEHSWHSVFEMTRSNMITAKMCRRYWAEAARATVYC*NHAPTRPHTGGTPYEKWHGTTPKLDHLRVFGYMTYMILQSQQRYKLDGKAWVGVFLRYDEDSSSYRIYNPENKSVQLSRNVRFDEEDFVTGHRGQLEHDETRDM-KGPFSALSVTPAVTRSHARGERGDLSNTEKPTSASENREEDSGAAVGVAKVQDTSNPTGAVSEE---------EPKSAAEALKSPEADKWSAAMEEEWRVLVKNETWE--SEDRGRLLVGRKT-ICTKWIFKRK--------------LKED--GSVARDKEA--VGEVAVQL-----TTESSLMYASTG-----------------------------------------------------TRLDIA*MVHQAVCGMGNPCREYFSTRKRIFRYLTTVPNLGITFGGKSNGHVLEGFVDADYAEDVEDRKSTTGYFFKLNGGAICWCSRKQQLVTWSSTEGECVAAGEAGKETVYLG---KSIGFGCRGNTTLFGDNKLATNLIKGSGAHWRTKHIGVRWNGIREWIREGILALKYVHTSDQLNDIFTKGLSRVKFQRLRNLL 1608
            +K LRSD+GGEFT   F++F   NG ++ ++   +PQQN V E    S+  M RS + + KM +  WAEA    VY  N  PTR   G TP + W    P + HLRVFG + Y+ +  Q+R KLD K+   VF+ YD  S  Y++YNP  K V +SR+V FDEE     +    + +E  D    P     V                                S    G   +QD    T  + +          EP    E ++     KW  AM EE + + KN+TWE  +   G+  + RK  +  +   KR+              + ED   ++AR+ E   +G +A  L      TE  +  +  G                                                     TR DI   V      M  P   +  T KRI RY+    + G+ +   S    L G+ D+D+A D++DRKSTTG+ F +      W S+KQ +VT S+ E E VAA  +    V+L    K +       T +F DNK A  L K    H R+KHI  R++ IRE I    + L++V + DQ+ DIFTK L    F +LR LL
Sbjct:  433 IKALRSDRGGEFTSNEFKEFCETNGIRRPLTVPRSPQQNGVAERKNRSILNMARSMLKSKKMPKELWAEAVDCAVYLSNRCPTRSVQGKTPQQAWSRKKPTVSHLRVFGSIAYVHVPDQERSKLDDKSEKYVFIGYDPSSKGYKLYNPSTKKVIVSRDVEFDEEGIWNWN---TQEEEKYDFFPFPEEEEQVNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSERPRGFRSLQDLYESTENIDDITLFCLFADCEPTGFKEVVQD---KKWRNAMNEEIKAIKKNDTWELTTLPYGKKAIRRKVGVQDEEERKRRGGEIQSKIGGNNPSMFEDFKNAMAREFEMTDLGLMAYYLGIEVKQTEEGIFISQEGYAKEILKKFEMLDCKPVSTPVECGVKLSRHDEEENVNPTLFKSLVGSLRYLTCTRPDILYGVGLVSRYMEAPTMTHLKTAKRILRYVKGTLDFGLLYS-PSKEFKLFGYSDSDWAGDMDDRKSTTGFVFYMGDTTFTWTSKKQPIVTLSTCEAEYVAATSSVCHAVWLRSLLKELHMSQEEATEIFVDNKSALALAKNPVFHDRSKHIDTRYHFIRECIARKEVQLEFVKSQDQVADIFTKPLKYDTFYKLRALL 1053          
BLAST of mRNA_H-paniculata_contig11848.1185.1 vs. uniprot
Match: A0A6A2WS02_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WS02_HIBSY)

HSP 1 Score: 201 bits (512), Expect = 2.960e-52
Identity = 175/603 (29.02%), Postives = 255/603 (42.29%), Query Frame = 1
Query:    1 LKRLRSDQGGEFTGEAFRQFRVENGTKQNISAAYTPQQNDVMEHSWHSVFEMTRSNMITAKMCRRYWAEAARATVYC*NHAPTRPHTGGTPYEKWHGTTPKLDHLRVFGYMTYMILQSQQRYKLDGKAWVGVFLRYDEDSSSYRIYNPENKSVQLSRNVRFDEEDFVTGHRGQLEHDETR--DMKGP----FSALSVTPAVTRSHARGERGDLSNTEKPTSASENREEDSGAAVGVAKVQDTSNPTGAVSEEEPKSAAEALKSPEADKWSAAMEEEWRVLVKNETWESEDRGRLLVGRKTICTKWIFKRK--------------------------LKEDGSVAR-------------------------------DKEAVGEVAVQLTTESS-LMYASTGTRLDIA*MVHQAVCGMGNPCREYFSTRKRIFRYLTTVPNLGITFGGKSNGHVLEGFVDADYAEDVEDRKSTTGYFFKLNGGAICWCSRKQQLVTWSSTEGECVAAGEAGKETVYLG---KSIGFGCRGNTTLFGDNKLATNLIKGSGAHWRTKHIGVRWNGIREWIREGILALKYVHTSDQLNDIFTKGLSRVKFQRLRNLL 1608
            +K LRSD G E+       F  E G K++ +   TPQQN V+E    S+ E  R   +   + + +W EA     Y  N  P    T     E W G     +HLR+FG   ++ + + +R KLD K+   +FL Y +    ++ ++P  K + +      D +D+       L  D+ R  ++K P    F  L V  A+T                                              VS ++  +  +++ S E DKW AAM +E   L  N TWE     RL  G+K I  KW++K+K                          L + G V +                               DKEA     V  + +   LMYA   TR D+A  V Q    M  P ++++   K IFRYL      GI FG + + H++ G+VD DYA D+++R+STTGY F L GG ICW    Q +V  S TE E + A EA K  ++L    K +G   +G   L  DN+   +L K      RTKHI VR++ IRE +  G +  + VHT +   D+FTK ++  KF    +LL
Sbjct:  409 IKCLRSDNGMEYKDSHLLNFCKEYGIKRHFTVCKTPQQNGVVERMNRSLNERARCLRLNTGLFKHFWDEAVNMACYLINRLPRASLTEKVVEEVWTGHDVTFNHLRIFGCHAFVYVPADERSKLDAKSKECIFLGYKKGVKGFKFWDPVAKKIVI-----IDLKDY------SLARDKVRWTNIKPPNKLGFEDL-VYFALT----------------------------------------------VSSDDSITFHDSITSQENDKWMAAMVKEMESLNHNRTWELV---RLPEGKKHIGCKWVYKKKPEVTKKRGEVQGSFGSKRDRDSRKLWLSQRGYVEKMLERFAMSSAKPVSTPLANHFKLSSEQCPKTDKEAEDMEKVSYSNDVGYLMYAMVYTRPDLAHAVSQVCKYMSKPGKQHWEAVKWIFRYLKGTVGHGIGFGSQRDNHLVVGYVDLDYAGDLDNRRSTTGYVFTLGGGPICWKYTIQSVVALSKTEPEYMVATEASKYALWLTGLVKELGVQ-QGGVQLLCDNQSTIHLAKNQVYRARTKHIDVRFHKIRELVASGEILFQKVHTDENAADMFTKPVTTDKFMHYLDLL 949          
BLAST of mRNA_H-paniculata_contig11848.1185.1 vs. uniprot
Match: A0A2Z6P3P6_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6P3P6_TRISU)

HSP 1 Score: 201 bits (512), Expect = 5.280e-52
Identity = 174/672 (25.89%), Postives = 280/672 (41.67%), Query Frame = 1
Query:   10 LRSDQGGEFTGEAFRQFRVENGTKQNISAAYTPQQNDVMEHSWHSVFEMTRSNMITAKMCRRYWAEAARATVYC*NHAPTRPHTGGTPYEKWHGTTPKLDHLRVFGYMTYMILQSQQRYKLDGKAWVGVFLRYDEDSSSYRIYNPENKSVQLSRNVRFDEEDF-----VTGHRGQLEHDETRDMKGPFSALSVTPAVTRSHARGERGDLS-----NTEKPTSASENREEDSGAAVGVAKVQ---------DTSNPTGAVSEEE--------PKSAAEALKSPEADK---WSAAMEEEWRVLVKNETWESEDRGRLLVGRKTICTKWIFKRKLKEDGSVARDKEAV---------------------------------------------------GEVAVQLTTESSLMYASTGTRLDIA*MVHQAVCG-------------------------------------------------------MGNPCREYFSTRKRIFRYLTTVPNLGITFGGKSNGHVLEGFVDADYAEDVEDRKSTTGYFFKLNGGAICWCSRKQQLVTWSSTEGECVAAGEAGKETVYLGK---SIGFGCRGNTTLFGDNKLATNLIKGSGAHWRTKHIGVRWNGIREWIREGILALKYVHTSDQLNDIFTKGLSRVKFQRLRNLL 1608
            LR+D+GGEF  + FR+F  E+G K+ ++AAYTPQQN + E    ++ +M +S +    + + +W EA    +Y  N +PT      TP E W  + P + H +VFG + +  +    R KLD K+   +FL   E+S +YR+Y+P  K + +SR+V+F E++      V+     +  D   ++       +V      +H      D S     N    TS+S N   DS + +    ++         DT+       +EE        P    + +K  +A+K   W AAME E   + +N TWE  D   L  G K I  KWI+K KL E G + + K  +                                                   GE+   +  E  L +   G+   +   +H+A+ G                                                       M +P   +    KRI RY+     L + +  + N   L  + D+D+  DV+DRKST+GY F L  GA+ W SRKQ +VT S+TE E +AA     + ++L +   S+G   +    +F DN     L K    H R+K+I ++++ +R    +G + L++  + +Q+ DI TK L    F+ L+  L
Sbjct:  510 LRTDRGGEFNSDEFREFCEEHGIKRQLTAAYTPQQNGIAERKNRTIMDMVKSMLAAKDIPKEFWPEAVNWAIYVLNRSPTAAIPDKTPEEAWSSSKPTVKHFKVFGCIAHTYVPDAHRKKLDDKSIKCIFLGVSEESKAYRLYHPPTKRIIISRDVKFVEQEKWKWSQVSDPANTVSEDSDEELD---ERNNVGEEPINNHHEDTHDDTSSEIQVNEHTSTSSSANTG-DSNSNLDQGTIRKPPSWPADYDTTMTEDEYIDEEAMNLIVFGPCIHEDPIKFEDAEKSQTWRAAMENEIDSIERNNTWELTD---LPKGAKVIGVKWIYKTKLNEKGEIEKFKARLVAKGYAQKYGTDYKEVFVPVARWDTIRCLLAIAAMKGWDVYQLDVKSAFLHGELHETVYVEQPLGFIKRGSENKVY-KLHKALYGLKQAPRAWNDDSDLLIISLYVDDLIFTGNNSVMVKGFKESMMKTFDMTDLGKMRFMEHPVETHMMAAKRILRYIRGTRELRVLYK-RGNQTGLIAYSDSDFGGDVDDRKSTSGYLFMLGSGAVSWSSRKQPIVTLSTTEAEFIAAAHCVCQGIWLKRILESMGLKQQRCLDVFCDNSSTIKLSKNPVLHGRSKYIDIKFHFLRNLSCDGTIELEHCTSQNQIADIMTKALKLESFENLKKRL 1172          
BLAST of mRNA_H-paniculata_contig11848.1185.1 vs. uniprot
Match: A0A6A3BFY8_HIBSY (Integrase catalytic domain-containing protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3BFY8_HIBSY)

HSP 1 Score: 197 bits (500), Expect = 1.940e-50
Identity = 181/615 (29.43%), Postives = 272/615 (44.23%), Query Frame = 1
Query:    1 LKRLRSDQGGEFTGEAFRQFRVENGTKQNISAAYTPQQNDVMEHSWHSVFEMTRSNMITAKMCRRYWAEAARATVYC*NHAPTRPHTGGTPYEKWHGTTPKLDHLRVFGYMTYMILQSQQRYKLDGKAWVGVFLRYDEDSSSYRIYNPENKSVQLSRNVRFDEEDFVTGHRGQLEHDETRDMKGPFSALSVTPAVTRSHARGERGDLSNTEKPTSASENREEDSGAAVGVAKVQDTSN---PTGAVSEE----------EPKSAAEALKSPEADKWSAAMEEEWRVLVKNETWESEDRGRLLVGRKTICTKWIFKRKLKEDGSVARDKEAV------GEVAVQLTTES-------------------------------------------------------SLMYASTGTRL-----------DIA*MVHQAVCGMGNPCREYFSTRKRIFRYLTTVPNLGITFGGKSNGHVLEGFVDADYAEDVEDRKSTTGYFFKLNGGAICWCSRKQQLVTWSSTEGECVAAGEAGKETVYLGKSIG-FGCRG-NTTLFGDNKLATNLIKGSGAHWRTKHIGVRWNGIREWIREGILALKYVHTSDQLNDIFTKGLSRVK 1584
            +KRLRSD GGE+    FR F   NG K   +   TPQQN V E    ++ E +RS  I A + +  WAEA     Y  N  P+ P  GG P E        L HLRVFG ++Y+ + S +R KLD K+   VF+ Y  D   YR ++ EN+ +  S++  F+E + +   R  +E           S+ S T A T+  A  E  ++S  +   S    +EE      G  +++ +S    PT   S            EP+   EA++  ++ KW ++M+++   L+ N+TWE ++   L  G+K +  KWI++ K + D S       V       EVA  L  E                                                        S M +S  TR            DIA  V      M NP + ++   K I RYL    N  + F  K    +L G+VD D A +V+ R+STTGY + + G A+ W S+ Q++   S+TE E V   EA KE V+L   +   G +  N  L+ D++ A +L K    H RTKHI +R++ IR  +++ IL L+ +  +    D+ TK ++  K
Sbjct:  458 VKRLRSDNGGEYRNSRFRDFCANNGIKIETTVPMTPQQNGVAERMNKTLNERSRSMRIHAGLPKFLWAEAINTAAYLINRGPSVPLDGGIPEEALSRKEINLSHLRVFGCISYIHINSTERSKLDTKSNKCVFVGYGGDEFGYRFWDYENRKIIRSKDAIFNE-NVMYKDRSTIE-----------SSSSNTKAETKEFAEFE--EISGNDVQISPETVQEE-----PGTPELRRSSRIPKPTQRYSPSLHYLLLTDNGEPECYDEAMQVEDSVKWESSMKDDMDSLMSNQTWELDE---LPPGKKALHNKWIYRIKEEHDESKRYKARLVVKGFQQKEVAENLHLEQLDVKTTFLHGDLEEEIYMRQPEGFIQTGKKNLVCRLKKSLYGLKQAPRQWYKKFDSFMSSSGFTRCQADHCCYIKRPDIAQAVGAVSRYMNNPGKVHWEAVKWILRYLRGTTNKSLCF--KGGDKILTGYVDVDLAGNVDIRRSTTGYVYTIGGTAMSWVSQLQKIAALSTTEAEYVVVTEASKEMVWLQSFLEELGKKQENNVLYCDSQSAIHLAKNPSFHSRTKHIQLRYHFIRSLLKDEILKLEKISGAQNPADMLTKTVTTEK 1048          
BLAST of mRNA_H-paniculata_contig11848.1185.1 vs. uniprot
Match: A0A2N9HWT1_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HWT1_FAGSY)

HSP 1 Score: 192 bits (488), Expect = 3.290e-49
Identity = 158/557 (28.37%), Postives = 256/557 (45.96%), Query Frame = 1
Query:    1 LKRLRSDQGGEFTGEAFRQFRVENGTKQNISAAYTPQQNDVMEHSWHSVFEMTRSNMITAKMCRRYWAEAARATVYC*NHAPTRPHTGGTPYEKWHGTTPKLDHLRVFGYMTYMILQSQQRYKLDGKAWVGVFLRYDEDSSSYRIYNPENKSVQLSRNVRFDEEDFVTGHRGQLEHDETRDMKGPFSALSVTPAVTRSHARGERGDLSNTEKPTSASENREEDSGAAVGVAKVQDTSNPTGAVSEEEPKSAAEALKSPEADKWSAAMEEEWRVL------VKNETWESEDRGRL-------LVGRKTICTKWI-----FKRKLKEDGSVARDKEAVGEVAVQLTTESSLMYASTGTRLDIA*MVHQAVCGMGNPCREYFSTRKRIFRYLTTVPNLGITFGGKSNGHVLEGFVDADYAEDVEDRKSTTGYFFKLNGGAICWCSRKQQLVTWSSTEGECVAAGEAGKETVYLG---KSIGFGCRGNTTLFGDNKLATNLIKGSGAHWRTKHIGVRWNGIREWIREGILALKYVHTSDQLNDIFTKGLSRVKFQRLRNLL 1608
            +K LR+D G E+    F +F  E+G K++ +   TPQQN V E    ++ E  R   + A++ + +WAEA     Y  N +P     G    E W G       +R+FG   Y+ +  + R KLD K+   +FL + +    Y++++P  + V +SR+V FDE+      +   E  +  +        +V   +    ++ +    SN ++  S   +R + +         +D  +     S E+P +  EA++S E DKW  AM EE   L      V+ E ++      L       L G K    +W      F  K  E   +   K+ +G    +      L  +      ++  +++  VC           TR  +   ++TV         +   + + G+VDAD A +V+DR+STTGY F L+GG ICW S  Q +V  S+TE E +A  EA KE ++L    K +G   +G   +  D++ A  L K    H RTKHI VR++ IRE I  G + L+ VHTS+   D+ TK ++  KF+   +L+
Sbjct:  338 IKCLRTDNGTEYRDGDFLKFCEEHGIKRHFTVRKTPQQNGVAERLNRTITETARCLRLNAELPKIFWAEAVDMACYIINRSPRVALDGKVAEEVWTGQEVDYSFMRIFGCPAYVHISGEDRSKLDPKSKKCIFLGFKKGVKGYKLWDPVAQKVVISRDVVFDEKSMTKAFKE--EKSQAAESSNNIGRSTVQVELDELESQSDEEPHSNDQEQDSTRSDRPKRNKRPPVRYGFEDLVSYALLTSSEDPSTFQEAIESSEKDKWMEAMVEENENLEEEIFMVQPEGFKQPGTENLVCRLKKSLYGLKQSPRQWYKRLKSFLHKEFEMKDLGAAKKILGMEICRDREARKLWLSQKNYIKEVGCLMYAMVC-----------TRPDLAHAVSTVSR-------QPGTNSVVGYVDADNAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWLKGLVKELGLN-QGGVQMHCDSQSAIYLAKNQVYHARTKHIDVRFHKIRELIVTGDIVLEKVHTSENAADMLTKPVTTAKFKHCLDLV 873          
BLAST of mRNA_H-paniculata_contig11848.1185.1 vs. uniprot
Match: A0A6A3CN73_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3CN73_HIBSY)

HSP 1 Score: 192 bits (488), Expect = 9.730e-49
Identity = 173/610 (28.36%), Postives = 272/610 (44.59%), Query Frame = 1
Query:    1 LKRLRSDQGGEFTGEAFRQFRVENGTKQNISAAYTPQQNDVMEHSWHSVFEMTRSNMITAKMCRRYWAEAARATVYC*NHAPTRPHTGGTPYEKWHGTTPKLDHLRVFGYMTYMILQSQQRYKLDGKAWVGVFLRYDEDSSSYRIYNPENKSVQLSRNVRFDEEDFVTGHRGQLEHD------ETRDMKGPFSALSVTPAVTRSHARGERGDLSNTEKPTSASENREEDSGAAVGVAKVQDTSNPTGAVSEEEPKSAAEALKSPEADKWSAAMEEEWRVLVKNETWESED--RGRLLVGRKTICTKWIFKRKLKEDGSVARDKEAVGEVAV----------QLTTESSLMYASTGTRLDIA*MVHQA--VCGMGNPCREYFSTRKRI------------FRYLTTVP------------------------------NLGI---------TFGGKSNGHVLEGFVDADYAEDVEDRKSTTGYFFKLNGGAICWCSRKQQLVTWSSTEGECVAAGEAGKETVYLG---KSIGFGCRGNTTLFGDNKLATNLIKGSGAHWRTKHIGVRWNGIREWIREGILALKYVHTSDQLNDIFTKGLSRVKFQRLRNLL 1608
            +K LRSD G E+T   F QF  E+G +++ +   TPQQN V E    S+ E  R   + A + + +WAEA     Y  N +P     G    E W G     D+LR+FG   Y+ + + +R KLD K+   +FL Y +    ++ ++P  K V +SR+V F E+  +   +     D      E  +   P S  S T  +       +R   +N + P     NR       +G    +D  +    VS ++P +  +A+ S E DKW AAM EE   L  N TWE      G+  +G K +  K     + + +   AR   ++  V            Q+  +++ ++     ++ +      A  + GM   CR+  S + R+            F   +  P                              +L +          FG + +  ++ G+VD+DYA D+++R+STTGY F L GG ICW S  Q +V  S+TE E +AA +A KE ++L    K +G   +G   L  DN+ A +L K      RTKHI VR++ IRE +  G +  + VHT +   D+FTK ++  KF+   +LL
Sbjct: 1942 IKCLRSDNGTEYTDSQFLQFCKEHGIQRHFTVRKTPQQNGVAERMNRSLNERARCLRLNAGLPKHFWAEAVNMACYLINRSPRASLAGKVAEEVWTGHDVSFDNLRIFGCPAYVHVPADERSKLDAKSKECIFLGYKKGVKGFKFWDPVAKKVVISRDVVFYEQSMLQQKQDTTVVDFEQLPVEKPETSQPTSGGSTTDDLQDYSLARDRVRRTNIKPP-----NR-------LGF---EDLVSFALTVSSDDPVTFHDAVTSQENDKWMAAMVEEMESLNHNRTWELVPLPEGKKPIGCKWVYKKKPAVTEKEGEKFKARWHTSIRAVLALVASWDLHLEQMDVKTAFLHGDLEEQIYMRQPEGAAKKILGM-EICRDRDSRKLRLSQRGYVEKMLERFAMSSAKPVSTPLANHFKLSSEQCPKTDKEAEIWQSQVDLSVLKGYCGTWNVFGSQRDNPLVVGYVDSDYAGDLDNRRSTTGYVFTLGGGPICWKSTVQSVVALSTTEAEYMAAAKAAKEALWLTGLVKELGVQ-QGGVQLLCDNQSAIHLAKNQVYRARTKHIDVRFHKIRELVASGEVLFQKVHTDENAADMFTKPVTTDKFKHCLDLL 2534          
BLAST of mRNA_H-paniculata_contig11848.1185.1 vs. uniprot
Match: A0A6A3CZW7_HIBSY (Integrase catalytic domain-containing protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3CZW7_HIBSY)

HSP 1 Score: 189 bits (481), Expect = 3.210e-48
Identity = 158/567 (27.87%), Postives = 258/567 (45.50%), Query Frame = 1
Query:   10 LRSDQGGEFTGEAFRQFRVENGTKQNISAAYTPQQNDVMEHSWHSVFEMTRSNMITAKMCRRYWAEAARATVYC*NHAPTRPHTGGTPYEKWHGTTPKLDHLRVFGYMTYMILQSQQRYKLDGKAWVGVFLRYDEDSSSYRIYNP---------------------ENKSVQLSRNVRFDEEDFVTGHRGQLEHDETRDMKGPFSA-LSVTPAVTRSHAR----GERGDLSNTEKPTSASENREEDSGAAVGVAKVQDTSNPTGAVSEEEPKSA---AEALKSPEADKWSAAMEEEWRVLVKNETWESEDRGRL--LVGRKTICTKWIFKRKLKEDGSVARDKEAVGEVAVQLTTESSLMYASTGTRLDIA*MVHQAVCGMGNPCREYFSTRKRIFRYLTTVPNLGITFGGKSNGHVLEGFVDADYAEDVEDRKSTTGYFFKLNGGAICWCSRKQQLVTWSSTEGECVAAGEAGKETVYLGK---SIGFGCRGNTTLFGDNKLATNLIKGSGAHWRTKHIGVRWNGIREWIREGILALKYVHTSDQLNDIFTKGLSRVKFQRLRNLL 1608
            LR+D GGE+    F QF  E+G K+ ++AAYTPQQN V E    ++F M RS +  +K+ + +W EA   +++  N +PT      T  E W G  P + H R+FG + Y  +  Q+R KL+ K    +FL   E + ++++YNP                     +++   + RN  ++      GH+       T D+K  +   L  T  V +  AR    G   +     K   A   R +     + +A     +  +  + + + KSA    +  +    DK+  +M  E+ +          D GR+   +G +   +         + G     ++ V E+       +++             ++H    G  +      S+RK+I RYL    + GI +  K+    L GF D+DYA D +DRKST+GY F L  GA+ W SRKQ +VT S+TE E VAA     + +++ K    + F  +G T ++ DN     L K    H R+KHI  R++ +R+ +    + + Y  + DQ+ DIFTK L    FQ+L+ +L
Sbjct:  373 LRTDHGGEYNSHDFTQFCEEHGIKRQLTAAYTPQQNGVSERKNRTIFNMVRSLLQRSKVPKSFWPEAVNWSIHILNRSPTFSVRNMTLEEAWSGRRPDVSHFRIFGCIAYAHVPDQKRKKLEDKGEKCIFLGVSECTKAFKLYNPRLRKLSSVVMRLNNQNGKKEMDDEIAAIERNKTWELTKLPKGHK-------TIDVKWVYKMKLKETGEVDKCKARLVAKGYSQEFGIDYKEVFARVVRHDTIRLVIALA-----AQNSWPIFQLDVKSAFLHGDLSEQTMLDKFKKSMMTEFNM---------SDLGRMRYFLGVEVAQS---------DAGIFISQRKYVQEILKNFKWRTAIR------------LIHGTSKGNAS------SSRKKILRYLQGTIDYGILYK-KAEKSDLIGFTDSDYARDQDDRKSTSGYVFMLGSGAVSWSSRKQPIVTLSTTEAELVAASTCVCQAIWMRKLLEEVHFKQKGPTIIYCDNSSTIKLSKNPILHGRSKHIDFRYHFLRDRVNYEEIDMVYCRSEDQIADIFTKALKLATFQKLQQML 890          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11848.1185.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A151T1X7_CAJCA1.930e-6829.41Retrovirus-related Pol polyprotein from transposon... [more]
A5BBA3_VITVI3.900e-5627.60Integrase catalytic domain-containing protein n=3 ... [more]
H3H7T3_PHYRM8.420e-5528.94Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N9G770_FAGSY1.060e-5329.94Integrase catalytic domain-containing protein n=1 ... [more]
A0A6A2WS02_HIBSY2.960e-5229.02Uncharacterized protein n=1 Tax=Hibiscus syriacus ... [more]
A0A2Z6P3P6_TRISU5.280e-5225.89Uncharacterized protein n=1 Tax=Trifolium subterra... [more]
A0A6A3BFY8_HIBSY1.940e-5029.43Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N9HWT1_FAGSY3.290e-4928.37Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A6A3CN73_HIBSY9.730e-4928.36Uncharacterized protein n=1 Tax=Hibiscus syriacus ... [more]
A0A6A3CZW7_HIBSY3.210e-4827.87Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11848contigH-paniculata_contig11848:758..3099 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score82.0
Seed ortholog evalue4e-13
Seed eggNOG ortholog400682.PAC_15703055
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs3ACW4@33154,3BVPH@33208,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
Exons3
Model size1608
Cds size702
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11848.1185.1prot_H-paniculata_contig11848.1185.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig11848 1849..2769 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928895.4035277-UTR-H-paniculata_contig11848:757..10051622928895.4035277-UTR-H-paniculata_contig11848:757..1005Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11848 758..1005 -
1691480659.8849776-UTR-H-paniculata_contig11848:757..10051691480659.8849776-UTR-H-paniculata_contig11848:757..1005Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11848 758..1005 -
1622928895.4153516-UTR-H-paniculata_contig11848:1520..18481622928895.4153516-UTR-H-paniculata_contig11848:1520..1848Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11848 1521..1848 -
1691480659.8943439-UTR-H-paniculata_contig11848:1520..18481691480659.8943439-UTR-H-paniculata_contig11848:1520..1848Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11848 1521..1848 -
1622928895.4608653-UTR-H-paniculata_contig11848:2769..30991622928895.4608653-UTR-H-paniculata_contig11848:2769..3099Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11848 2770..3099 -
1691480659.9191618-UTR-H-paniculata_contig11848:2769..30991691480659.9191618-UTR-H-paniculata_contig11848:2769..3099Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11848 2770..3099 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928895.4305694-CDS-H-paniculata_contig11848:1848..22301622928895.4305694-CDS-H-paniculata_contig11848:1848..2230Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11848 1849..2230 -
1691480659.9018853-CDS-H-paniculata_contig11848:1848..22301691480659.9018853-CDS-H-paniculata_contig11848:1848..2230Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11848 1849..2230 -
1622928895.4433916-CDS-H-paniculata_contig11848:2449..27691622928895.4433916-CDS-H-paniculata_contig11848:2449..2769Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11848 2450..2769 -
1691480659.9093523-CDS-H-paniculata_contig11848:2449..27691691480659.9093523-CDS-H-paniculata_contig11848:2449..2769Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11848 2450..2769 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig11848.1185.1

>prot_H-paniculata_contig11848.1185.1 ID=prot_H-paniculata_contig11848.1185.1|Name=mRNA_H-paniculata_contig11848.1185.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=234bp
MTYMILQSQQRYKLDGKAWVGVFLRYDEDSSSYRIYNPENKSVQLSRNVR
FDEEDFVTGHRGQLEHDETRDMKGPFSALSVTPAVTRSHARGERGDLSNT
EKPTSASENREEDSGAAVGVAKVQDTSNPTGAVSEEEPKSAAEALKSPEA
DKWSAAMEEEWRVLVKNETWESEDRGRLLVGRKTICTKWIFKRKLKEDGS
VARDKEAVGEVAVQLTTESSLMYASTGTRLDIA*
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mRNA from alignment at H-paniculata_contig11848:758..3099-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig11848.1185.1 ID=mRNA_H-paniculata_contig11848.1185.1|Name=mRNA_H-paniculata_contig11848.1185.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2342bp|location=Sequence derived from alignment at H-paniculata_contig11848:758..3099- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTAAAACGTCTTCGGTCAGATCAAGGAGGAGAGTTTACAGGAGAAGCATT CCGTCAATTTCGTGTGGAAAATGGTACCAAGCAAAACATTTCTGCCGCCT ACACGCCGCAGCAAAACGATGTGATGGAGCACAGCTGGCATAGCGTTTTC GAGATGACCCGAAGTAACATGATCACCGCCAAAATGTGTCGCAGGTATTG GGCGGAGGCGGCGCGCGCGACTGTATACTGCTAAAATCACGCCCCGACGC GACCGCACACCGGAGGAACGCCATATGAGAAATGGCACGGCACGACACCA AAGCTTGACCACCTTCGTGTCTTCGGCTACATGACGTACATGATCTTGCA GTCGCAACAGAGATACAAACTCGATGGCAAAGCATGGGTGGGGGTGTTTC TGAGGTACGACGAGGACAGCTCGAGTTATCGCATATATAACCCGGAAAAC AAGAGCGTCCAGTTGAGCAGGAACGTAAGATTTGATGAAGAGGATTTCGT AACCGGTCATCGCGGACAGCTGGAGCACGACGAGACGCGAGACATGAAAG GTCCATTTTCAGCACTGTCGGTCACGCCAGCGGTCACGCGATCTCACGCC CGAGGTGAGCGAGGAGACCTATCCAACACGGAAAAACCGACGTCAGCGTC GTCAGCCGTCCTCGCCAACCCAGACAGCGCCTTGAGCGATGACGATTATC ATGAAGACAATGATGACTCGTAGGTGAACGATGCTGAACCAGAAGCCGAA GACACATCATCGACGGAGACATGTGCGCCCACATCTCTGGGGGAGACCAG GACATAATCAAGGATGGAGGAGCGGCGACCGCGAGATCGGTCACCAATAC TGACACGGTCGAGAGCGAGGGAAAACCGCGAAGAGGATTCAGGTGCTGCC GTGGGCGTGGCTAAAGTGCAAGACACCAGCAACCCTACAGGGGCGGTGTC TGAGGAAGAGCCGAAATCTGCGGCAGAAGCATTGAAGAGCCCAGAGGCAG ACAAATGGAGCGCGGCAATGGAGGAGGAATGGAGAGTGTTGGTGAAAAAT GAGACGTGGGAGAGCGAGGACCGGGGGAGGTTACTGGTAGGGCGGAAGAC GATCTGTACCAAATGGATTTTTAAGCGCAAACTGAAGGAGGACGGCAGCG TGGCACGCGATAAAGAAGCAGTGGGAGAAGTGGCAGTTCAATTGACTACA GAGTCATCACTCATGTACGCTTCGACAGGAACTAGACTTGATATAGCATA GATGGTACACCAAGCAGTGTGTGGTATGGGGAACCCATGTCGGGAATATT TCAGTACACGTAAGCGCATTTTTCGTTATCTCACGACTGTGCCTAACCTC GGCATTACGTTCGGCGGTAAGAGCAATGGTCACGTTCTGGAAGGATTCGT TGATGCCGATTATGCGGAAGATGTCGAGGACCGAAAGTCCACAACAGGAT ACTTTTTCAAGCTGAACGGTGGTGCGATCTGTTGGTGCTCTAGGAAGCAA CAGTTAGTCACGTGGTCCAGTACAGAGGGAGAGTGCGTTGCTGCAGGAGA AGCGGGAAAGGAGACAGTATATCTAGGGAGTTAATCGGTAAACTGGGCAG AGCTGAGCTCGTGACTGTGTGGAGTTGAAGGCAGCTTGTGAAAGACGGGC CGAGAGATAAAGTCTTTAATTATTGCTGATGGACCGTCCCCGGTGATTGC ATTAGAGTGCAAAAGGGAAAGAGTGAGGAGTGACTATCCTGCACAAGACA GCACCAGAGAACTTCCTCTAATCGAATCTCCAATTCCTCAAGATACACCG AAAGAAACCACACAGAAATTTCCTAATCATCAGCAATAGTCCGCTCCCAT ATCCGACCATAAATAACACCATATTGGTGAAATGAGGACCCAACTTTGAG ATGGAGACCCTGGGTTATATTGGAAATAGGCCTTCTCCTGAAATTCAATT TCGGATCTTCAGGATACAGGCTATTTCCAATATAACCCAGGGTCCCCATC TCAAAGTTGGGTCCCCATTTCACCAATATGCTGTTAAACCTCCGATACAT ATCCATCACACTACGCTACGAGCATATCCAACAGGAGTCACTAGAATCGA TAGGTTTCGGGTGCAGGGGGAACACGACATTATTTGGAGACAACAAGTTA GCTACCAATCTCATTAAGGGATCTGGCGCACACTGGAGGACAAAACACAT CGGAGTGCGCTGGAACGGAATTCGAGAGTGGATTCGGGAAGGAATATTGG CGTTGAAATACGTGCACACCAGCGACCAACTTAATGACATTTTCACGAAA GGACTGAGCAGAGTAAAGTTTCAGAGACTTAGAAATTTACTC
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Coding sequence (CDS) from alignment at H-paniculata_contig11848:758..3099-

>mRNA_H-paniculata_contig11848.1185.1 ID=mRNA_H-paniculata_contig11848.1185.1|Name=mRNA_H-paniculata_contig11848.1185.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1404bp|location=Sequence derived from alignment at H-paniculata_contig11848:758..3099- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACGTACATGATCTTGCAGTCGCAACAGAGATACAAACTCGATGGCAA
AGCATGGGTGGGGGTGTTTCTGAGGTACGACGAGGACAGCTCGAGTTATC
GCATATATAACCCGGAAAACAAGAGCGTCCAGTTGAGCAGGAACGTAAGA
TTTGATGAAGAGGATTTCGTAACCGGTCATCGCGGACAGCTGGAGCACGA
CGAGACGCGAGACATGAAAGGTCCATTTTCAGCACTGTCGGTCACGCCAG
CGGTCACGCGATCTCACGCCCGAGGTGAGCGAGGAGACCTATCCAACACG
GAAAAACCGACGTCAGCGTCATGACGTACATGATCTTGCAGTCGCAACAG
AGATACAAACTCGATGGCAAAGCATGGGTGGGGGTGTTTCTGAGGTACGA
CGAGGACAGCTCGAGTTATCGCATATATAACCCGGAAAACAAGAGCGTCC
AGTTGAGCAGGAACGTAAGATTTGATGAAGAGGATTTCGTAACCGGTCAT
CGCGGACAGCTGGAGCACGACGAGACGCGAGACATGAAAGGTCCATTTTC
AGCACTGTCGGTCACGCCAGCGGTCACGCGATCTCACGCCCGAGGTGAGC
GAGGAGACCTATCCAACACGGAAAAACCGACGTCAGCGTCGGAAAACCGC
GAAGAGGATTCAGGTGCTGCCGTGGGCGTGGCTAAAGTGCAAGACACCAG
CAACCCTACAGGGGCGGTGTCTGAGGAAGAGCCGAAATCTGCGGCAGAAG
CATTGAAGAGCCCAGAGGCAGACAAATGGAGCGCGGCAATGGAGGAGGAA
TGGAGAGTGTTGGTGAAAAATGAGACGTGGGAGAGCGAGGACCGGGGGAG
GTTACTGGTAGGGCGGAAGACGATCTGTACCAAATGGATTTTTAAGCGCA
AACTGAAGGAGGACGGCAGCGTGGCACGCGATAAAGAAGCAGTGGGAGAA
GTGGCAGTTCAATTGACTACAGAGTCATCACTCATGTACGCTTCGACAGG
AACTAGACTTGATATAGCATAGGGAAAACCGCGAAGAGGATTCAGGTGCT
GCCGTGGGCGTGGCTAAAGTGCAAGACACCAGCAACCCTACAGGGGCGGT
GTCTGAGGAAGAGCCGAAATCTGCGGCAGAAGCATTGAAGAGCCCAGAGG
CAGACAAATGGAGCGCGGCAATGGAGGAGGAATGGAGAGTGTTGGTGAAA
AATGAGACGTGGGAGAGCGAGGACCGGGGGAGGTTACTGGTAGGGCGGAA
GACGATCTGTACCAAATGGATTTTTAAGCGCAAACTGAAGGAGGACGGCA
GCGTGGCACGCGATAAAGAAGCAGTGGGAGAAGTGGCAGTTCAATTGACT
ACAGAGTCATCACTCATGTACGCTTCGACAGGAACTAGACTTGATATAGC
ATAG
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