mRNA_H-paniculata_contig477.11825.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig477.11825.1 vs. uniprot
Match: A0A6H5L192_9PHAE (HOOK domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L192_9PHAE) HSP 1 Score: 434 bits (1116), Expect = 5.800e-127 Identity = 408/1104 (36.96%), Postives = 534/1104 (48.37%), Query Frame = 1
Query: 1 YERSLVVWANTFFRSDDLNMAPADSITDFTSGDLIVPIARAILGHPLDTGNEGGDVGKGGDLDTSTVGWKHVLSMMQPAGLLEYEDIHVFCTETWELRHKEDGPKMAVTCLETLLRHTVTEDCPGRETFIRQIMSLDNPTQCTLSCIIVGS-PVE------SSEAGSPSRES-------------VCSASFTVSPAPSSMTPTPARRRFTLGDGNGDAISSPYQN------ISNWFSP---TSGNKGSDSQVVGVSVGAITPVKPDGNHPRVELDTEGMTSGMRSSQRGA----------ASTAVGRSGLPVEVHDQVVAGLRAEIVNIKRQRDEAEAARASVAVALEEHKTTAAARASELGEEMMKARRTAERMINAGDDNVIAVEKLLRAKHEKEVSKLRDRACEAEKRAFELESLGEEVMGLRDELDVLRPTEMKLSKVEENLSRCRAKLEELSDLPLQLKREEDAHAEVLDRCLALEEETSQIPGLRRQLDSYRRAKTDAEVASREQLRELKLTQEEVSRLTGEVRAMSDGSGALRNEHQRLQEEIIQREKEKAEGEEGGGGIGQG---------------------VSELNPVLSEELARLRRENNLLAAKVDYNTVETIEDLEQRADDADRLADSFHDQLIDERKRAAVAEASLAAARDRIVALEAEIASLNEDHAAALTQLETDAAAATAAAAAELASFQREAAEXXXXAEQAKEKAALEGEIWEAQEATVREGQRVSLEMARAVEEWGKEKADIEGKMTSERAGWRVGERKAAAELAEVRRETNXXXXXXXXXXXXXXXXXXXXXXAMLASAQEETVKEKEGRAEEGRLKNEALTEIQNLEEELAEGKKMALEAIEGLKMHSRDVRNSAA-----------ASMAKLEGEFGAYRTTHTLDDETYHKDMDQWEHQIRTQKVLASNLTEQVDVLKKDKRRLEREKTYYWGQAEELRISSTGRAGQADPGMEADHALLLEQTKELIEENRELRAKLEGTDGVAGAIGAGGREGGVSTRRGGSGVAAMRAMHESEVKGLKEEKQDMTMKYHATATKVREQEQRCAELSEGMRRLQEQFTKLQLLCQRQEKKLVAAKASS 3099
+E+ LV WANTF S APA S+ FT+GD ++PIAR ILG D + G + GW V+S + A L+E +D+ V E K D MAVTCLE LL HT + C GR TFIRQIMSLD Q L ++ G P++ SSEAGSP R+ A+ +SP + +RRR T +G + S + + + +W+SP S + S G + G V P LD E AS G + VEV D L+AE+ +K Q + A AARA +E + A EAE RA L + R K+EELS LP QLKREE AHAEVLDRCL LE E +QIP LRRQ+ YRR++TD EVASREQ REL+ +EE +RL+ EV+ + + A R E +RLQE R+ E ++ E GGGIG+G +SE NP L EE+ARLR N L AKVDYNT ETI DLE++A DA RLAD FHD L ER+ A AE SLA AR RI LE++I +L E+H A +T+LE ++ E+A+ XXX E+ + GE E +EA R KEK + +AEV +E XXXXXXXX A +++ L E+ + GK+ AL+AI L+ ++RD R +A A MA L GEF YR THT+DD +Y++D+DQWE I T+K + +L Q+ L+KDKR+LEREKT+YWG+AEELR+S+ G+ADP +ADH L+EQT+ELIEENRELR + + GA+ R GG R G SGVAAMRA HE+E+ LKEEKQD+ +KYHAT+ K+ E++QRCAEL+ + + QF LQL+ +RQEKKL + A+S
Sbjct: 5 HEQGLVAWANTFSSSFPEGAAPAASLAHFTNGDALIPIARTILGDNHDDHDSDGQA--------TASGWAGVISYLHSADLIE-KDLQVPTEED----SKRD---MAVTCLEALLHHTCQDTCAGRATFIRQIMSLDTDVQSVLRHVVAGEEPLDEDGDASSSEAGSPYRDDRXXXXXXXXXXXPAAIAAAHLSPGSGA-----SRRRRTSITTSGSSYDSSHSDEEDGLGLESWYSPHPRRSARRKSKVPTGGGTGGRAARVGPRPPRQGRTLDMEXXXXXXXXXXXXXXXXXXXXXXXASCPAGWTVTAVEVVD-----LKAEVSRLKDQLERAAAARAEAVSVVEAQRDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATEAEXRASALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYREKIEELSGLPGQLKREEKAHAEVLDRCLRLETEVTQIPQLRRQVGQYRRSQTDMEVASREQSRELETAREESARLSQEVKDLRESYEAARGEQRRLQERWTARDTEGSDDEWAGGGIGEGGHGFLGAELLGGVFAGQAVVGISEFNPELMEEMARLRLANEQLKAKVDYNTEETILDLERKAGDASRLADKFHDSLASEREVRAAAELSLAEARARIADLESQIVALREEHLATVTRLEGESERREEGLRGEMAAAXXXXXXXXXRVEEERS-----GERAEFREAAARXXXXXXXXXXXXXXAHEKEKGESARXXXXXXXXXXXXXXXXXXXVAEVEKELEGKLQEERRLAAEELXXXXXXXXXXXXXXXXXXX-----------XXXXAERQLRELAEKFSTGKQEALKAIGRLETNARDQREESALLLQEQMADHEAKMAALSGEFARYRETHTVDDISYNQDVDQWEMSIATKKKMIGDLQGQLRALEKDKRKLEREKTFYWGRAEELRMSAAA-GGRADPSRDADHLQLVEQTRELIEENRELRQRAQDNSDGGGAMST--RSGG---RWGSSGVAAMRAEHEAEMTALKEEKQDLLLKYHATSAKLNEEQQRCAELNGEVEEARAQFVSLQLVNKRQEKKLQDSIATS 1060
BLAST of mRNA_H-paniculata_contig477.11825.1 vs. uniprot
Match: A0A7S2P099_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P099_9STRA) HSP 1 Score: 121 bits (303), Expect = 1.240e-24 Identity = 82/207 (39.61%), Postives = 122/207 (58.94%), Query Frame = 1
Query: 1141 EEVMGLRDELDVLRPTEMKLSKVEENLSRCRAKLEELSDLPLQLKREEDAHAEVLDRCLALEEETSQIPGLRRQLDSYRRAKTDAEVASREQLRELKLTQEEVSRLTGEVRAMSDGSGALRNEHQRLQEEIIQREKEKAEGEEGGGGIGQGVSELNPVLSEELARLRRENNLLAAKVDYNTVETIEDLEQRADDADRLADSFHDQLI 1761
EE + LRDELD+ + ++ K + EE L +CR K+E D+ L+REE AHA ++D+CL +E E +Q+ L+RQL+ YR TDAEVA E +L+ +E+ S L G A+ G ++E LQ+ + ++E EGG +G G+SELNP L EEL LR E L V++++ LE+ DDA RL++ F +Q +
Sbjct: 292 EENLRLRDELDIFQCSKEKFTHTEEQLRKCREKIEAFGDVHDALQREEKAHAVLVDKCLEMENELAQLKPLKRQLEEYRVRATDAEVALAECRDDLRRFKEKSSGLEGANLALQRGVNLQQSEADALQKRL---QEEGQRSGEGGSAVGVGMSELNPELMEELKMLRCEYARLKDFEAKREVDSVQRLEESCDDAKRLSERFKEQFL 495
BLAST of mRNA_H-paniculata_contig477.11825.1 vs. uniprot
Match: A0A7S2U7B9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7B9_9STRA) HSP 1 Score: 117 bits (293), Expect = 7.390e-23 Identity = 187/701 (26.68%), Postives = 325/701 (46.36%), Query Frame = 1
Query: 1051 LRAKHEKEVSKLRDRACEAEKRAFELESLGEEVMGLRDELDVLRPTEMKLSKVEENLSRCRAKLEELSDLPLQLKREEDAHAEVLDRCLALEEETSQIPGLRRQLDSYRRAKTDAEVASREQLRELKLTQEEVSRLTGEVRAMSDGSGALRNEHQRLQEEIIQREKEKAEGE--EGGGGIGQGVSELNPVLSEELARLRRENNLLAAKVDYNTVETIEDLEQRADDADRLADSFHDQLIDER----KRAAVAEASLAAARDRIVALEAEIASLNEDHAAALTQLETDAAAATAAAAAELASFQREAAEXXXXAEQAKEKAALEGEIWEAQEATVREGQRVSLEMAR-AVEEWGKEKADIEGKMTSERAGWRVGERKAAAELAEVRR--------ETNXXXXXXXXXXXXXXXXXXXXXXAMLASAQEETVKEKEGRAEEGRLKNEALTEIQNLEEELAEGKKMALEAIEGLKMHSRDVRNSAAASMAKLEGEFGAYRTTHTLDDETYHKDMDQWEHQIRTQKVLASNLTEQVDVLKKDKRRLEREKTYYWGQAEELRISSTGRAGQADPGMEADHALLLEQTKELIEENRELRAKLEGTDGVAGAIGAGGREGGVS------------TRRGGSGVAAMRAMHESEVKGLKEEKQDMTMKYHATATKVREQEQRCAELSEGMRRLQEQFTKLQLLCQRQEK 3072
L K+E E+S L+ ++ E EE+ LRDELDV + + KL+ VE+ L +C+ KLEE++D L REE+AH+ ++ +CL LE E + + L+RQL+ Y+ DAEV E +++ + L G + G+ HQ + +E+ +R E+A E +G+G+SELNP L EE+ RLR EN ++++ +E++ DD RL+D + +Q I+++ K + S+A+ ++ I+ EI SLN+ + + E A+ E AKE ++++ +RV E + +++ + + D+E KM S R ++ + E R E XXXXXXXXXXXXXXXXX + ++E++++ E EE EAL +++GK M LE ++ +++ ++A++E E +R ++ + L+ + + LK ++EREK + E R G G AD ++ + L + + ++ EN +LR L G D ++ GG+S + GS +A + A +E ++ L EK+++ M++ A + V++ +QR +L E + RL+ + ++L QR EK
Sbjct: 122 LEDKYEDELSALKREVTSLQEFKQEAGEAREEISTLRDELDVNQHSSEKLAFVEDQLRKCKEKLEEMNDTKEALVREEEAHSALISKCLQLENELTALNPLKRQLEEYKTRAVDAEVKVTEYEEDIRTLKSRQETLVGMNEDLHLGAKI----HQEVNQEMSKRLVEEANSNPVENLSTVGEGMSELNPELMEEVQRLRNENARFKEFAAKRENDSVQKMEEQLDDKARLSDKYKEQFIEKKGEIEKTRVLLATSMASEQELIL----EIGSLNQK----INETE---------------------AQMNEERESAKE--------------SLKQAERVLEETTKDLIDKAQQRQNDLENKMNSMLEDERETSKEHINCMVEEMRLLIDNHTKELERLQLEXXXXXXXXXXXXXXXXXXXKSDYEKESLEKDEKFIEE----KEAL---------VSKGKAMILELKTQAQLDLENLKEDRDLAIARMEEEMKEFREKQXXXXXXXXXXXXXXXXXLKLSVSSKNELSNENEDLKDHTEKMEREKIALQAENERFRRQLGGHFG-ADNKAQSQYEELRGEYESVLAENVQLREDLAGRDQ---SLSFADNRGGISIDPSTSQYAAGRANKSGSALAQVSAEYEETIERLTNEKRELVMRHSAAQSDVQKADQRSWDLEEELTRLKNELISIKLEIQRTEK 758
BLAST of mRNA_H-paniculata_contig477.11825.1 vs. uniprot
Match: A0A7S3V7Q8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V7Q8_9STRA) HSP 1 Score: 111 bits (278), Expect = 6.960e-21 Identity = 82/237 (34.60%), Postives = 131/237 (55.27%), Query Frame = 1
Query: 1141 EEVMGLRDELDVLRPTEMKLSKVEENLSRCRAKLEELSDLPLQLKREEDAHAEVLDRCLALEEETSQIPGLRRQLDSYRRAKTDAEVASREQLRELKLTQEEVSRLTGEVRAMSDGSGALRNEHQRLQEEIIQREKEKAEGEEGGGGIGQGVSELNPVLSEELARLRRENNLLAAKVDYNTVETIEDLEQRADDADRLADSFHDQLIDERKRAAVAEASLAAARDRIVALEAEIASL 1851
EEV LRDE+DVL+ ++KL E+ L +C+ KLE+L D+ L+ EE AH++ + +CL LE + + + L+RQL+ Y+ TDAEV + E+K +E +TG + + + + E + L+ ++ Q E+ E +G G+SELNP L EEL RLR EN L ++++ LE++ DDA RL+ F +Q + +K + L A+ R LE ++ L
Sbjct: 525 EEVASLRDEVDVLQHAKVKLQLTEDQLRKCKGKLEQLGDVSKALQNEEKAHSDAVAKCLNLENQLAALVPLKRQLEDYKTRATDAEVRLVDYEDEIKRLEELGGDITGLNKELKLATFRQQEESEDLRRKMQQHEETVTIPTETHA-VGGGISELNPELKEELLRLRNENARLKVFAAKREDDSVQRLEEKLDDAIRLSAKFKEQFLATKKTLDSTQNQLGASLQREQELEQNLSEL 760
BLAST of mRNA_H-paniculata_contig477.11825.1 vs. uniprot
Match: K0T9J6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T9J6_THAOC) HSP 1 Score: 109 bits (273), Expect = 2.200e-20 Identity = 77/211 (36.49%), Postives = 121/211 (57.35%), Query Frame = 1
Query: 1135 LGEEVMGLRDELDVLRPTEMKLSKVEENLSRCRAKLEELSDLPLQLKREEDAHAEVLDRCLALEEETSQIPGLRRQLDSYRRAKTDAEVASREQLRELKLTQEEVSRLTGEVRAMSDGSGALRNEHQRLQEEIIQREKEKAEGEEG--GGGIGQGVSELNPVLSEELARLRRENNLLAAKVDYNTVETIEDLEQRADDADRLADSFHDQLI 1761
L +E L+DELDVLR ++ KL+ EE L +CR K+E + D L+REE AHA +D+C++LE + + + L+RQL+ YR T+AE A E +L+ +E+ S L G + + + +HQ ++ + R ++ G+ G G +G+G+SELNP L EE+ LR E + L V+ ++ LE+ DD RLAD + +Q
Sbjct: 300 LKDENSRLQDELDVLRNSKEKLAFSEEQLRKCRDKIESIGDAHEALQREEKAHAAAVDKCVSLENDLAILKPLKRQLEEYRVRATNAEAALEESREDLRRMREKSSGLEGAHIQLREAT----TQHQ-MEANALSRRLQEGTGKLGDVGNALGKGMSELNPELLEEIKMLRSEYSRLKEFESKREVDAVQRLEETLDDTKRLADRYKEQFF 505
BLAST of mRNA_H-paniculata_contig477.11825.1 vs. uniprot
Match: A0A7S1ZBF5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZBF5_9STRA) HSP 1 Score: 102 bits (253), Expect = 5.970e-18 Identity = 67/202 (33.17%), Postives = 113/202 (55.94%), Query Frame = 1
Query: 1174 VLRPTEMKLSKVEENLSRCRAKLEELSDLPLQLKREEDAHAEVLDRCLALEEETSQIPGLRRQLDSYRRAKTDAEVASREQLRELKLTQEEVSRLTGEVRAMSDGSGAL-RNEHQRLQEEIIQREKEKAEGEEGGGGIGQGVSELNPVLSEELARLRRENNLLAAKVDYNTVETIEDLEQRADDADRLADSFHDQLIDERKR 1776
+L+ ++ KLS E+ +C+ KL L D+ QLKREE+AHA+ +D+CL E + + + ++RQL + DAEV E EL T ++ E++ + +G+ + RN HQ +E + +++ G GIG G++ELNP L EEL RLR EN L ++++ LE+ DD +L+ F ++ +D +++
Sbjct: 353 LLQHSQHKLSVTEDQYKKCKDKLLSLLDIEQQLKREEEAHAKSVDQCLTYENQLNALKHVKRQLKQSQNRALDAEVKLSELQDELHKTINRTNQYEQEIKELKEGNQMMTRNIHQNFEEGLALQDQSNDYG-----GIGDGMTELNPELKEELLRLRNENQRLKDFEQKRQQDSVQKLEESLDDTQKLSTKFKEKFLDTKQK 549
BLAST of mRNA_H-paniculata_contig477.11825.1 vs. uniprot
Match: UPI001AAD293E (protein Hook homolog 1 n=1 Tax=Rana temporaria TaxID=8407 RepID=UPI001AAD293E) HSP 1 Score: 76.6 bits (187), Expect = 2.630e-10 Identity = 70/224 (31.25%), Postives = 112/224 (50.00%), Query Frame = 1
Query: 1084 LRDRACEAEKRAFELESLGEEVMGLRDELDVLRPTEMKLSKVEENLSRCRAKLEELSDLPLQLKREEDAHAEVLDRCLALEEETSQIPGLRRQLDSYRRAKTDAEVA-SREQLR------ELKLTQEEVSRLTGEVRAMSDGSGALRNEHQRLQEEIIQREKEKAEGEEGGGGIGQGVSELNPVLSEEL-ARLRRENNLLAAKVDYNTVETIEDLEQRADDADR 1731
L + E + R+ EL SL EE L+DE+DVLR T K +K+E + R KLE+L+DL Q+K ED + + ++LEE+ + R QL++Y+R D S E R EL E+ L E + AL+ ++ L+ ++Q++ G+ G I +EL PV E+ RL+ EN +L + + + E I DL+ + ++ R
Sbjct: 269 LEKQLIETQNRSVELASLAEESRALKDEMDVLRATADKATKLESAVETYRKKLEDLNDLRKQVKSLEDTNLMYMHNTVSLEEDLKKANSARNQLETYKRQVQDLHTKLSMESKRADTLAFELTKLHEKQEALVKEKERLIVQRDALKETNEELRCSLVQQDHLSQSGDSGIKNIDNLAAELLPVEYREMFIRLQHENKMLRVQQEGSENERITDLQTQLEEKQR 492
BLAST of mRNA_H-paniculata_contig477.11825.1 vs. uniprot
Match: A0A2T7NQF6_POMCA (Calponin-homology (CH) domain-containing protein n=3 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NQF6_POMCA) HSP 1 Score: 70.9 bits (172), Expect = 1.640e-8 Identity = 68/230 (29.57%), Postives = 105/230 (45.65%), Query Frame = 1
Query: 1123 ELESLGEEVMGLRDELDVLRPTEMKLSKVEENLSRCRAKLEELSDLPLQLKREEDAHAEVLDRCLALEEETSQIPGLRRQLDSYRRAKTDAEVASREQLRELKLTQEEVSRLTGEVRAMSDGSGALRNEHQRLQEEI--IQREKEKAEGEE-----------------GGGGIGQGVSELNPV----------LSEELARLRRENNLLAAKVDYNTVETIEDLEQRADDA 1725
EL L E ++DELDVLR T K +K E + + KLE++SDL +QLK E+ + + + + +EEE ++ ++QL+SY+R T E+ +RLT E + + E RLQE + +QREKE+ E G + + +S++ P + E+L RL EN LL D N E +L+ + DDA
Sbjct: 282 ELTQLASESRAMKDELDVLRHTSDKATKYEAAIESYKKKLEDMSDLRVQLKMLEEKNTHYMQQQIEMEEEIKRLNNTKQQLESYKRQ-----------------TLEQQNRLTDETKR----ADKWEFECSRLQERLATLQREKERVVAERDSLKELNDELKCTQPTMAGISLSEQISDIGPSPQRMLSLPPEVKEQLLRLEHENKLLKMSADGNQEEQTHNLQSQLDDA 490
BLAST of mRNA_H-paniculata_contig477.11825.1 vs. uniprot
Match: A0A8J6F7C4_ELECQ (Calponin-homology (CH) domain-containing protein n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6F7C4_ELECQ) HSP 1 Score: 68.6 bits (166), Expect = 8.200e-8 Identity = 66/218 (30.28%), Postives = 104/218 (47.71%), Query Frame = 1
Query: 1102 EAEKRAFELESLGEEVMGLRDELDVLRPTEMKLSKVEENLSRCRAKLEELSDLPLQLKREEDAHAEVLDRCLALEEETSQIPGLRRQLDSYRRAKTDAEVASREQLRELKLTQEEVSRLTGE-------VRAMSDGSGALRNEHQRLQEEIIQREKEKAEGEEGGGGIGQGVSELNPVLSEEL-ARLRRENNLLAAKVDYNTVETIEDLEQRADDADR 1731
E + R+ EL SL EE L+DE+DVLR T K SK+E + R KLE+LSDL Q+K ED + + ++LEEE + R QL++Y+R D + + E++RL + ++ L+ ++Q++ E G I +EL PV EL RL+ EN +L + + + E I DL+ + ++ R
Sbjct: 274 ETQNRSDELASLAEESRALKDEIDVLRTTADKASKMESTVESYRKKLEDLSDLRRQVKSLEDTNLMYMHNTVSLEEELKKANTARAQLETYKRQVQDLHNKLSMETKRADTLAYEMTRLREKQXXXXXXXXXXXXXXXXXXXTNEELRCSLVQQDHLNQSSESGLKNIDNLAAELLPVECRELFIRLQHENKMLRVQQEGSENERIADLQTQLEERQR 491
BLAST of mRNA_H-paniculata_contig477.11825.1 vs. uniprot
Match: A0A7S2KF11_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KF11_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 8.750e-8 Identity = 62/197 (31.47%), Postives = 99/197 (50.25%), Query Frame = 1
Query: 1303 LDRCLALEEETSQIPGLRRQLDSYRRAKTDAEVASREQLRELKLTQEEVSRLTGEVRAMSDGSGALRNEHQRLQEEIIQREKEKAEGEEGGGGIGQGVSELNPVLSEELARLRRENNLLAAKVDYNTVETIEDLEQRADDADRLADSFHDQLIDERKRAAVAEASLAAARDRIVALEAEIASLNEDHAAALTQLETD 1893
+ + + LE E S + LRRQL++Y+ T AEV + EL+ RNE + LQ+ +++ E +K G E G +G+GVSELNP ++EE+ RLR EN+ L V +T + +E L + DD+ RL++SF Q + + + L A+ L+ + LNE + TQL+ +
Sbjct: 383 VQQVIDLENELSSLAPLRRQLETYKARATAAEVKLTDVSDELQKXXXXXXXXXXXXXXXXXXXQFRRNEAEELQK-MLKEETKKDLGNEILG-LGEGVSELNPAVAEEITRLRNENSALKNFVARHTQDAVEQLGEDLDDSRRLSESFKQQFLATKNNLEITLTKLKASEMSNEKLQLDAELLNEKISVLTTQLKEE 577 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig477.11825.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig477.11825.1 >prot_H-paniculata_contig477.11825.1 ID=prot_H-paniculata_contig477.11825.1|Name=mRNA_H-paniculata_contig477.11825.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1214bp MAPADSITDFTSGDLIVPIARAILGHPLDTGNEGGDVGKGGDLDTSTVGWback to top mRNA from alignment at H-paniculata_contig477:13946..29430+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig477.11825.1 ID=mRNA_H-paniculata_contig477.11825.1|Name=mRNA_H-paniculata_contig477.11825.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=15485bp|location=Sequence derived from alignment at H-paniculata_contig477:13946..29430+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig477:13946..29430+ >mRNA_H-paniculata_contig477.11825.1 ID=mRNA_H-paniculata_contig477.11825.1|Name=mRNA_H-paniculata_contig477.11825.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=7284bp|location=Sequence derived from alignment at H-paniculata_contig477:13946..29430+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |