prot_H-paniculata_contig4741.11781.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4741.11781.1
Unique Nameprot_H-paniculata_contig4741.11781.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length228
Homology
BLAST of mRNA_H-paniculata_contig4741.11781.1 vs. uniprot
Match: D7FL45_ECTSI (Plastoquinol--plastocyanin reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL45_ECTSI)

HSP 1 Score: 306 bits (784), Expect = 4.520e-103
Identity = 158/227 (69.60%), Postives = 179/227 (78.85%), Query Frame = 0
Query:    2 LFKILSLAALAMTPSAYGFVAPFAATTAFRGNAVSTRSAV--AASRPMRMSAADDSFVPDMSRRQAMNLILFSSLGVNVLGLAVPYIAFFVPPGSGDSSGGVVAHDAIGNDVTTSSWLATHAAGSRELAEGIKGDATYLTVTDDKKISDYGIVAVCTHLGCVVPWSKAENKFICPCHGSQYDSTGKVVRGPAPLSLALSHVEESDGGKVTFKQWTETDFRNGEKPWW 226
            + K ++LAALA    A  FV+P A  T+F G+AV+ R     A S+ M+MS+ ++ FVPDM RR AMNLIL  S+GVNVLGLAVPYIAFFVP        GV A DAIGN+VT  SWLATH  GSRELAEGIKGDATYL VT+DKK+ DYGIVAVCTHLGCVVPW+KAENKF+CPCHGSQYD TGKV+RGPAPLSLALSHVEE DG KV FK+W ETDFR G+KPWW
Sbjct:    1 MIKAVALAALAALFGADAFVSPVA--TSFSGSAVAQRPTASRATSKAMKMSSNEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDG-KVIFKEWKETDFRTGDKPWW 224          
BLAST of mRNA_H-paniculata_contig4741.11781.1 vs. uniprot
Match: A0A836CBH8_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBH8_9STRA)

HSP 1 Score: 289 bits (740), Expect = 2.080e-96
Identity = 145/222 (65.32%), Postives = 171/222 (77.03%), Query Frame = 0
Query:    5 ILSLAALAMTPSAYGFVAPFAATTAFRGNAVSTRSAVAASRPMRMSAADDSFVPDMSRRQAMNLILFSSLGVNVLGLAVPYIAFFVPPGSGDSSGGVVAHDAIGNDVTTSSWLATHAAGSRELAEGIKGDATYLTVTDDKKISDYGIVAVCTHLGCVVPWSKAENKFICPCHGSQYDSTGKVVRGPAPLSLALSHVEESDGGKVTFKQWTETDFRNGEKPWW 226
            +L++   A+T  ++GFVAP    +AF G  V ++    AS  ++MSAA+D+FVPDM+RR AMN IL  S GV VLGLA+PYI+FFVP  +G + GGV+A DA+G DVT   W+ATH  GSREL EGIKGDATYLTV  DK I D+GIVAVCTHLGCVVPW +AENKFICPCHGSQY+  GKVVRGPAPLSLALSH+E +D G V FK WTETDFR GE PWW
Sbjct:    5 LLAVCVAAVTCLSHGFVAP----SAFTGARVLSKPVAQASSAIKMSAAEDAFVPDMNRRVAMNAILAGSAGVVVLGLAIPYISFFVPKSAGGAGGGVIARDAVGQDVTVEGWVATHLPGSRELVEGIKGDATYLTVKQDKTIQDFGIVAVCTHLGCVVPWVQAENKFICPCHGSQYNMDGKVVRGPAPLSLALSHIE-TDTGNVVFKPWTETDFRTGEAPWW 221          
BLAST of mRNA_H-paniculata_contig4741.11781.1 vs. uniprot
Match: A0A835YPA4_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPA4_9STRA)

HSP 1 Score: 283 bits (724), Expect = 5.640e-94
Identity = 138/203 (67.98%), Postives = 160/203 (78.82%), Query Frame = 0
Query:   24 FAATTAFRGNAVSTRSAVAASRPMRMSAADDSFVPDMSRRQAMNLILFSSLGVNVLGLAVPYIAFFVPPGSGDSSGGVVAHDAIGNDVTTSSWLATHAAGSRELAEGIKGDATYLTVTDDKKISDYGIVAVCTHLGCVVPWSKAENKFICPCHGSQYDSTGKVVRGPAPLSLALSHVEESDGGKVTFKQWTETDFRNGEKPWW 226
            F A ++F G  V +++   +     MSAA+D+FVPDM+RR AMNLIL  S GV VLGLAVPYIAFFVP  +G++ GGV+A DA+G DVT   WL TH  GSREL EGIKGDATYLTV  DK I D+GIVAVCTHLGCVVPW +AENKFICPCHGSQY++ GKVVRGPAPLSLALSH++ ++ GKV FK WTETDFR GE PWW
Sbjct:   20 FVAPSSFAGAKVVSKAVTKSVARTSMSAAEDAFVPDMNRRVAMNLILAGSAGVVVLGLAVPYIAFFVPKSAGNAGGGVIARDAVGQDVTVEGWLGTHLPGSRELVEGIKGDATYLTVKQDKTIQDFGIVAVCTHLGCVVPWVQAENKFICPCHGSQYNADGKVVRGPAPLSLALSHID-TESGKVVFKPWTETDFRTGEAPWW 221          
BLAST of mRNA_H-paniculata_contig4741.11781.1 vs. uniprot
Match: A0A7S1U2M5_9STRA (Plastoquinol--plastocyanin reductase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2M5_9STRA)

HSP 1 Score: 265 bits (678), Expect = 6.970e-86
Identity = 123/182 (67.58%), Postives = 144/182 (79.12%), Query Frame = 0
Query:   45 RPMRMSAADDSFVPDMSRRQAMNLILFSSLGVNVLGLAVPYIAFFVPPGSGDSSGGVVAHDAIGNDVTTSSWLATHAAGSRELAEGIKGDATYLTVTDDKKISDYGIVAVCTHLGCVVPWSKAENKFICPCHGSQYDSTGKVVRGPAPLSLALSHVEESDGGKVTFKQWTETDFRNGEKPWW 226
            R M M+A++D+FVPDM RR  MN IL +S+GV  LG+AVPYI+FFVP GSG    G +A DA+GNDVT S WL TH AG+REL +G+KGDATYL V DDK + +YG+ AVCTHLGCVVPW+ A+ KF+CPCHGSQY+  GKVVRGPAPLSLAL+HVE  DG KV F  WTETDFR GE PWW
Sbjct:  118 RAMTMAASEDAFVPDMDRRNVMNAILTASVGVAGLGMAVPYISFFVPAGSGGGGSGTIAKDALGNDVTESGWLGTHNAGARELVQGLKGDATYLIVNDDKTLENYGLSAVCTHLGCVVPWNAAQGKFMCPCHGSQYNKEGKVVRGPAPLSLALAHVENKDG-KVVFTPWTETDFRTGEAPWW 298          
BLAST of mRNA_H-paniculata_contig4741.11781.1 vs. uniprot
Match: W7TXJ0_9STRA (Plastoquinol--plastocyanin reductase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXJ0_9STRA)

HSP 1 Score: 256 bits (654), Expect = 4.040e-83
Identity = 120/180 (66.67%), Postives = 140/180 (77.78%), Query Frame = 0
Query:   47 MRMSAADDSFVPDMSRRQAMNLILFSSLGVNVLGLAVPYIAFFVPPGSGDSSGGVVAHDAIGNDVTTSSWLATHAAGSRELAEGIKGDATYLTVTDDKKISDYGIVAVCTHLGCVVPWSKAENKFICPCHGSQYDSTGKVVRGPAPLSLALSHVEESDGGKVTFKQWTETDFRNGEKPWW 226
            M  +  ++ FVPDM RR+ MN IL  S+G+NV GLAVPYIAFFVP   G + GG+ A DA+G+DVT   WL+TH AG R L +G+KGDATYL V +DK I +YG+ AVCTHLGCVVPW+KAE+KFICPCHGSQYD TGKVVRGPAPLSLAL+HV+ESDG KV    WTETDFR    PWW
Sbjct:   58 MAEAVGEEPFVPDMDRRKLMNTILLGSVGLNVAGLAVPYIAFFVPRTGGGAGGGLAAKDALGDDVTVQGWLSTHQAGDRSLVQGLKGDATYLIVKEDKTIENYGLNAVCTHLGCVVPWNKAESKFICPCHGSQYDKTGKVVRGPAPLSLALAHVKESDG-KVLLTPWTETDFRTDTAPWW 236          
BLAST of mRNA_H-paniculata_contig4741.11781.1 vs. uniprot
Match: A0A835ZDT9_9STRA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT9_9STRA)

HSP 1 Score: 253 bits (647), Expect = 1.720e-82
Identity = 125/183 (68.31%), Postives = 142/183 (77.60%), Query Frame = 0
Query:   49 MSAADDSFVPDMSRRQAMNLILFSSLGVNVLGLAVPYIAFFVPP-GSGDSSGGVVAHDAIGNDVTTSSWLATHAAGSRELAEGIKGDATYLTVTDD----KKISDYGIVAVCTHLGCVVPWSKAENKFICPCHGSQYDSTGKVVRGPAPLSLALSHVEESDGGKVTFKQWTETDFRNGEKPWW 226
            MSAAD+++VPDM RRQA+NLIL S  GV VLGLA+PY+A FVP    G  SG VVA DA+G +VT+  WLATH  GSREL EG+KGDATYL V  D    K I D GIVAVCTH+GCVVPW+ AENKFICPCH SQYD+ G+VVRGPAPLSLALSHV+ +  GKV  + WTETDFR GE PWW
Sbjct:   26 MSAADEAYVPDMGRRQALNLILVSFTGVTVLGLAIPYVALFVPKHAEGGRSGSVVARDALGQEVTSEGWLATHLPGSRELVEGMKGDATYLIVDKDELHGKAIRDLGIVAVCTHMGCVVPWNAAENKFICPCHASQYDANGRVVRGPAPLSLALSHVD-TGSGKVLLRPWTETDFRTGEAPWW 207          
BLAST of mRNA_H-paniculata_contig4741.11781.1 vs. uniprot
Match: A0A8J5X155_DIALT (Rieske domain-containing protein n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X155_DIALT)

HSP 1 Score: 245 bits (626), Expect = 3.840e-79
Identity = 119/178 (66.85%), Postives = 130/178 (73.03%), Query Frame = 0
Query:   49 MSAADDSFVPDMSRRQAMNLILFSSLGVNVLGLAVPYIAFFVPPGSGDSSGGVVAHDAIGNDVTTSSWLATHAAGSRELAEGIKGDATYLTVTDDKKISDYGIVAVCTHLGCVVPWSKAENKFICPCHGSQYDSTGKVVRGPAPLSLALSHVEESDGGKVTFKQWTETDFRNGEKPWW 226
            M+AADD FVPDM RR  MN +L  +  V  L LA  Y  FF PPGS     GV AHDA+G+DVT   WLATH AG R+L EG+KGDATYL VT DKKI  Y + AVCTHLGCVVPW+ A+ KFICPCHGSQYDSTGKVVRGPAPLSLAL+HV   D GKV    WTETDFR G  PWW
Sbjct:   41 MAAADDGFVPDMERRVIMNALLVGATAVPGLWLAGGYAYFFAPPGSXXXXXGVTAHDALGDDVTVEKWLATHPAGDRKLVEGLKGDATYLIVTPDKKIETYALNAVCTHLGCVVPWNAAQQKFICPCHGSQYDSTGKVVRGPAPLSLALAHVN-GDSGKVVLSTWTETDFRTGLAPWW 217          
BLAST of mRNA_H-paniculata_contig4741.11781.1 vs. uniprot
Match: A0A8K1ZZD0_9CYAN (Cytochrome b6-f complex iron-sulfur subunit n=1 Tax=Petrachloros mirabilis ULC683 TaxID=2781853 RepID=A0A8K1ZZD0_9CYAN)

HSP 1 Score: 241 bits (616), Expect = 3.570e-78
Identity = 106/170 (62.35%), Postives = 130/170 (76.47%), Query Frame = 0
Query:   57 VPDMSRRQAMNLILFSSLGVNVLGLAVPYIAFFVPPGSGDSSGGVVAHDAIGNDVTTSSWLATHAAGSRELAEGIKGDATYLTVTDDKKISDYGIVAVCTHLGCVVPWSKAENKFICPCHGSQYDSTGKVVRGPAPLSLALSHVEESDGGKVTFKQWTETDFRNGEKPWW 226
            VPDM RRQ MN + F ++    LG   P + +F+PP SG S  GV A DA+GND+  S ++ATH AG R LA+G+KGD TY+ VT+D+ ++DYG+ AVCTHLGCVVPW+  ENKFICPCHGSQYDSTGKVVRGPAPLSLAL+H   ++G K+ F QWTETDFR G+ PWW
Sbjct:   10 VPDMGRRQFMNFLAFGTITGTALGALYPIVKYFIPPSSGSSGSGVTAKDALGNDLVVSDFIATHPAGERTLAQGLKGDPTYVIVTEDQTLADYGLSAVCTHLGCVVPWNAGENKFICPCHGSQYDSTGKVVRGPAPLSLALAHATVTEGDKLVFSQWTETDFRTGKDPWW 179          
BLAST of mRNA_H-paniculata_contig4741.11781.1 vs. uniprot
Match: W9R0C1_9ROSA (Plastoquinol--plastocyanin reductase n=1 Tax=Morus notabilis TaxID=981085 RepID=W9R0C1_9ROSA)

HSP 1 Score: 242 bits (618), Expect = 9.960e-78
Identity = 115/199 (57.79%), Postives = 142/199 (71.36%), Query Frame = 0
Query:   34 AVSTRSAVAASRPMRM-----SAADDSFVPDMSRRQAMNLILFSSLGVNVLGLAVPYIAFFVPPGSGDSSGGVVAHDAIGNDVTTSSWLATHAAGSRELAEGIKGDATYLTVTDDKKISDYGIVAVCTHLGCVVPWSKAENKFICPCHGSQYDSTGKVVRGPAPLSLALSHVEES-DGGKVTFKQWTETDFRNGEKPWW 226
            A  ++SAV   + MR+     S   D  VPDM +RQ +NL+L  ++ +   G+ +PY +FF PPGSG + GG VA DA+GNDV  S WL TH  G R L +G+KGD TYL V +DK ++ YGI AVCTHLGCVVPW+KAENKFICPCHGSQY+  G+VVRGPAPLSLAL+H + + D GKV F  W ETDFR GE+PWW
Sbjct:   33 AAKSQSAVVKGKGMRIACQATSVPADDRVPDMGKRQLLNLLLLGAISLPSAGMLIPYASFFAPPGSGGAGGGTVAKDAVGNDVIASEWLKTHGPGDRTLTQGLKGDPTYLVVENDKTLATYGINAVCTHLGCVVPWNKAENKFICPCHGSQYNERGRVVRGPAPLSLALAHADVNVDDGKVVFVPWVETDFRTGEEPWW 231          
BLAST of mRNA_H-paniculata_contig4741.11781.1 vs. uniprot
Match: UPI00140DE06B (cytochrome b6-f complex iron-sulfur subunit n=1 Tax=Aphanocapsa montana TaxID=327565 RepID=UPI00140DE06B)

HSP 1 Score: 239 bits (611), Expect = 2.050e-77
Identity = 105/170 (61.76%), Postives = 130/170 (76.47%), Query Frame = 0
Query:   57 VPDMSRRQAMNLILFSSLGVNVLGLAVPYIAFFVPPGSGDSSGGVVAHDAIGNDVTTSSWLATHAAGSRELAEGIKGDATYLTVTDDKKISDYGIVAVCTHLGCVVPWSKAENKFICPCHGSQYDSTGKVVRGPAPLSLALSHVEESDGGKVTFKQWTETDFRNGEKPWW 226
            VPDM RRQ MNL+ F ++    LG   P + +F+PP SG + GGVVA DA+GND+  S++L TH+AG R LA+G+KGD TY+ + DD+ I DYG+ AVCTHLGCVVPW+  +NKF+CPCHGSQYDSTGKVVRGPAPLSLAL H   S+  K+ F  WTETDFR G++PWW
Sbjct:   10 VPDMGRRQFMNLLTFGTITGTALGALYPIVKYFIPPSSGGTGGGVVAKDALGNDIVASAYLETHSAGDRSLAQGLKGDPTYVVIQDDQTIGDYGLNAVCTHLGCVVPWNAGQNKFMCPCHGSQYDSTGKVVRGPAPLSLALVHANVSEDDKLVFTPWTETDFRTGKEPWW 179          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4741.11781.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL45_ECTSI4.520e-10369.60Plastoquinol--plastocyanin reductase n=2 Tax=Ectoc... [more]
A0A836CBH8_9STRA2.080e-9665.32Plastoquinol--plastocyanin reductase n=1 Tax=Tribo... [more]
A0A835YPA4_9STRA5.640e-9467.98Plastoquinol--plastocyanin reductase n=1 Tax=Tribo... [more]
A0A7S1U2M5_9STRA6.970e-8667.58Plastoquinol--plastocyanin reductase n=2 Tax=Phaeo... [more]
W7TXJ0_9STRA4.040e-8366.67Plastoquinol--plastocyanin reductase n=2 Tax=Monod... [more]
A0A835ZDT9_9STRA1.720e-8268.31Cytochrome b6-f complex iron-sulfur subunit, chlor... [more]
A0A8J5X155_DIALT3.840e-7966.85Rieske domain-containing protein n=3 Tax=Diacronem... [more]
A0A8K1ZZD0_9CYAN3.570e-7862.35Cytochrome b6-f complex iron-sulfur subunit n=1 Ta... [more]
W9R0C1_9ROSA9.960e-7857.79Plastoquinol--plastocyanin reductase n=1 Tax=Morus... [more]
UPI00140DE06B2.050e-7761.76cytochrome b6-f complex iron-sulfur subunit n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005805Rieske iron-sulphur protein, C-terminalPRINTSPR00162RIESKEcoord: 171..183
score: 64.81
coord: 183..195
score: 61.15
coord: 150..161
score: 66.04
IPR017941Rieske [2Fe-2S] iron-sulphur domainPFAMPF00355Rieskecoord: 137..194
e-value: 6.3E-12
score: 45.3
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROSITEPS51296RIESKEcoord: 119..209
score: 21.704
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 92..227
e-value: 4.8E-44
score: 151.2
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 56..226
NoneNo IPR availableGENE3D1.20.5.700coord: 49..91
e-value: 2.8E-11
score: 44.9
NoneNo IPR availablePANTHERPTHR10134:SF5CYTOCHROME B6-F COMPLEX IRON-SULFUR SUBUNIT, CHLOROPLASTICcoord: 44..227
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 91..227
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..67
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..90
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.712
NoneNo IPR availableTMHMMTMhelixcoord: 68..90
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
IPR014909Cytochrome b6-f complex Fe-S subunitPFAMPF08802CytB6-F_Fe-Scoord: 57..93
e-value: 4.3E-13
score: 49.0
IPR014349Rieske iron-sulphur proteinPANTHERPTHR10134CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIALcoord: 44..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4741contigH-paniculata_contig4741:8489..14499 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4741.11781.1mRNA_H-paniculata_contig4741.11781.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4741 7552..14511 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4741.11781.1 ID=prot_H-paniculata_contig4741.11781.1|Name=mRNA_H-paniculata_contig4741.11781.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=228bp
MLFKILSLAALAMTPSAYGFVAPFAATTAFRGNAVSTRSAVAASRPMRMS
AADDSFVPDMSRRQAMNLILFSSLGVNVLGLAVPYIAFFVPPGSGDSSGG
VVAHDAIGNDVTTSSWLATHAAGSRELAEGIKGDATYLTVTDDKKISDYG
IVAVCTHLGCVVPWSKAENKFICPCHGSQYDSTGKVVRGPAPLSLALSHV
EESDGGKVTFKQWTETDFRNGEKPWWT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005805Rieske_Fe-S_prot_C
IPR017941Rieske_2Fe-2S
IPR036922Rieske_2Fe-2S_sf
IPR014909Cyt_b6-f_cplx_Fe-S_su
IPR014349Rieske_Fe-S_prot