prot_H-paniculata_contig474.11775.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig474.11775.1
Unique Nameprot_H-paniculata_contig474.11775.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length515
Homology
BLAST of mRNA_H-paniculata_contig474.11775.1 vs. uniprot
Match: A0A6H5L7H8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7H8_9PHAE)

HSP 1 Score: 305 bits (782), Expect = 8.390e-94
Identity = 277/576 (48.09%), Postives = 324/576 (56.25%), Query Frame = 0
Query:    1 MANLSYRQPKMPLANPPRWLVSEIFGHESYVTSVTFFGENYDRIVSGSYDEVAKLWDLKTKRCLRKFIGHTDGVTVVMQGPDGRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAGGNNVGEAELVSEIMAVASAATAPAAPPSRWPAKPKRSSASSSGSIASPSVAPLGKLKDGENKPAPSGPRF-RIFACGGVHIPTPARPMLRSVDVDPTATST---------AVAVDNSSHFDMCTAY--KDEPDGEE----------------------------GVVSSVAVSAAGVSGSGTLIAGCYDKAIRVLRNVFPAVLTVAEVVDADCLQSAGAEACSEGEDGGDGVASKAELPHASMEILGRHADGVRAVAISANGRWGVSGSRDGHIKVWEIASEPHPPGAALQ------TAEADFEAHHGVIFSLCMSPDARILVSGGSDRCIRVWDLSLVVNSRRLAVNRARALWSDGRIRRARAKRSSSSSANGMGGSADG-----------------SGGGALKAFNSSREQRQHIFEGLFALPEIIYAKVLMY 513
            M+NLSY QPK+ L  P R L   I+ H SYV+SV FFG   DR+++GSYDE AKLWDLKT   L+KF GHTDG+T VM GPDGR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   G+  GE EL SEI AVA          S  P  P  SS                        PAP  P   RI ACGG  +P PA+PMLR VDV   A +          A  V   +  D+C A   + E +GE                             G+++ VA+SAAG  G G L+ G YDK +RVL NV              C       + S               P  +M +LGRH +GVRAVAISA+GRW V+G R G +KVWE+  E  PPGA  +       AEA+FEAH G ++SLCMSPDAR +VSGGSD+  RVWDLSL+V +RR+++NR RALW+  R+RRAR KRS                               +G   LKAF +SREQRQ I E LFALP+IIYAKVLMY
Sbjct:   51 MSNLSYHQPKVEL-KPTRLLARTIYAHHSYVSSVAFFGSQCDRLLTGSYDETAKLWDLKTGLALQKFQGHTDGITFVMPGPDGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGHLHGETELDSEITAVAG---------SDGPPSPSSSS------------------------PAPVVPSVVRILACGGTFLPAPAKPMLRRVDVRTAAAAARADQAGGEEADVVSRPARSDLCAAAAGRSERNGENXXXXXXXXXXXXXXXDARGGGEAAVKEAGIMTCVAISAAGARGRGILVTGSYDKGVRVLHNVL-------------CPDRENPPSSS--------XXXXXXXPPVTMRMLGRHEEGVRAVAISADGRWAVTGDRKGIVKVWEVPREA-PPGADREPLSSDGAAEAEFEAHKGYVYSLCMSPDARTVVSGGSDKAFRVWDLSLIVYARRMSLNRLRALWTADRLRRARLKRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAGAQVLKAFGNSREQRQQILESLFALPDIIYAKVLMY 570          
BLAST of mRNA_H-paniculata_contig474.11775.1 vs. uniprot
Match: D8LF89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF89_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 4.530e-33
Identity = 102/270 (37.78%), Postives = 128/270 (47.41%), Query Frame = 0
Query:  202 NKPAPSGPRF-RIFACGGVHIPTPARPMLRSVDVDPTATSTAVA----------VDNSSHFDMCTAY--KDEPDGEE-------------------------GVVSSVAVSAAGVSGSGTLIAGCYDKAIRVLRNVFPAVLTVAEVVDADCLQSAGAEACSEGED--GGDGVASKAELPHASMEILGRHADGVRAVAISANGRWGVSGSRDGHIKVWEIASEPHPPGAALQ------TAEADFEAHHGVIFSLCMSPDARILVSGGSDRC 425
            + PAP  P   RI ACGG  +P PA+PMLR VDV   A + A A          V      D+C A   + E DGE                          G+++ VA+SAAG  G G L+ G YDK +RVL NV                       C + E+                +M +LGRH +GVRAVAISA+GRW V+G R G +KVWE+  E  PPGA  +       AEA+FEAH G ++SLCMSPDAR L    + RC
Sbjct:   21 SSPAPVVPPVVRILACGGTFLPAPAKPMLRRVDVRTAAPAGAGADQAGGEEADVVSRPVRSDLCAAAAGRSERDGENXXXXXXXXXXXXXXRGGGEAAVKEAGIMTCVAISAAGARGRGILVTGSYDKGVRVLHNVL----------------------CPDRENPPXXXXXXXXXXXXXVTMRMLGRHEEGVRAVAISADGRWAVTGDRKGLVKVWEVPRET-PPGADREPSSPDGAAEAEFEAHKGYVYSLCMSPDARTLAR--TSRC 265          
BLAST of mRNA_H-paniculata_contig474.11775.1 vs. uniprot
Match: D8LF88_ECTSI (WD repeat-containing protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF88_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 2.470e-24
Identity = 53/84 (63.10%), Postives = 62/84 (73.81%), Query Frame = 0
Query:    1 MANLSYRQPKMPLANPPRWLVSEIFGHESYVTSVTFFGENYDRIVSGSYDEVAKLWDLKTKRCLRKFIGHTDGVTVVMQGPDGR 84
            M+NLSY QPK+ L  P R L   I+ H SYV+SV FFG   DR+++GSYDE AKLWDLKT   L+KF GHTDG+T VM GPDGR
Sbjct:    1 MSNLSYHQPKVEL-KPTRLLARTIYAHHSYVSSVAFFGSQCDRLLTGSYDETAKLWDLKTGLALQKFQGHTDGITFVMPGPDGR 83          
BLAST of mRNA_H-paniculata_contig474.11775.1 vs. uniprot
Match: A0A3Q3E665_HIPCM (WD repeat domain 3 n=3 Tax=Hippocampus comes TaxID=109280 RepID=A0A3Q3E665_HIPCM)

HSP 1 Score: 64.3 bits (155), Expect = 3.980e-7
Identity = 33/89 (37.08%), Postives = 57/89 (64.04%), Query Frame = 0
Query:  367 VSGSRDGHIKVWEIASEPHPPGAALQTAEADFEAHHGVIFSLCMSPDARILVSGGSDRCIRVWDLSLVVNS----RRLAVNRARALWSD 451
            + GS++G ++++E+AS     G+ L+T     +AHHG ++SLC++PD R +VSGG+D+ +++WD  LV +     +RL +   R L  D
Sbjct:  461 ILGSKNGKLQIFELAS-----GSLLET----LDAHHGALWSLCLAPDQRGIVSGGADKTVKLWDFELVKDEASGHKRLTLKHRRTLQLD 540          
BLAST of mRNA_H-paniculata_contig474.11775.1 vs. uniprot
Match: A0A2D0R5D1_ICTPU (WD repeat-containing protein 3 n=7 Tax=Siluroidei TaxID=1489793 RepID=A0A2D0R5D1_ICTPU)

HSP 1 Score: 61.6 bits (148), Expect = 2.840e-6
Identity = 32/90 (35.56%), Postives = 56/90 (62.22%), Query Frame = 0
Query:  367 VSGSRDGHIKVWEIASEPHPPGAALQTAEADFEAHHGVIFSLCMSPDARILVSGGSDRCIRVWDLSLVVNS-----RRLAVNRARALWSD 451
            + G++ G I+++++AS     G+ L+TAEA    H G ++S+C+SPD R +V+GG+D+ ++ WD  L+ ++     +RL V   R L  D
Sbjct:  466 IVGTKSGKIQIFDLAS-----GSLLETAEA----HEGALWSICLSPDQRGIVTGGADKMVKFWDFELIKDNESGANKRLTVKHTRTLQLD 546          
BLAST of mRNA_H-paniculata_contig474.11775.1 vs. uniprot
Match: A0A6P8GI26_CLUHA (WD repeat-containing protein 3 n=3 Tax=Clupeidae TaxID=55118 RepID=A0A6P8GI26_CLUHA)

HSP 1 Score: 61.6 bits (148), Expect = 2.840e-6
Identity = 32/91 (35.16%), Postives = 56/91 (61.54%), Query Frame = 0
Query:  367 VSGSRDGHIKVWEIASEPHPPGAALQTAEADFEAHHGVIFSLCMSPDARILVSGGSDRCIRVWDLSLVVN------SRRLAVNRARALWSD 451
            + GS+ G I+++E++S     G+ L+T     +AH+G ++S+C+SPD R +V+GG+D+ ++ WD  L+ +      S+RL V   R L  D
Sbjct:  466 ILGSKSGKIQIFELSS-----GSLLET----IDAHNGAVWSMCLSPDQRGIVTGGADKTVKFWDFELIKDEQSEQASKRLTVKHTRTLQLD 547          
BLAST of mRNA_H-paniculata_contig474.11775.1 vs. uniprot
Match: A0A3B4C1D5_PYGNA (WD repeat domain 3 n=2 Tax=Pygocentrus nattereri TaxID=42514 RepID=A0A3B4C1D5_PYGNA)

HSP 1 Score: 61.2 bits (147), Expect = 3.740e-6
Identity = 32/90 (35.56%), Postives = 56/90 (62.22%), Query Frame = 0
Query:  367 VSGSRDGHIKVWEIASEPHPPGAALQTAEADFEAHHGVIFSLCMSPDARILVSGGSDRCIRVWDLSLVVNS-----RRLAVNRARALWSD 451
            + G++ G I+++++AS     G+ L+T EA    H G ++S+C+SPD R +V+GG+D+ ++ WD  L+ ++     +RL V  AR L  D
Sbjct:  463 IIGTKSGKIQIFDLAS-----GSLLETTEA----HDGALWSICLSPDQRGIVTGGADKTVKFWDFELIKDNESGPNKRLTVKHARTLQLD 543          
BLAST of mRNA_H-paniculata_contig474.11775.1 vs. uniprot
Match: A0A8C4QVD1_EPTBU (Utp12 domain-containing protein n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4QVD1_EPTBU)

HSP 1 Score: 60.5 bits (145), Expect = 5.320e-6
Identity = 33/89 (37.08%), Postives = 56/89 (62.92%), Query Frame = 0
Query:  367 VSGSRDGHIKVWEIASEPHPPGAALQTAEADFEAHHGVIFSLCMSPDARILVSGGSDRCIRVWDLSLVVN----SRRLAVNRARALWSD 451
            + G+++G ++++E+AS     G+ LQ+ EA    H G ++SLC++PD R LVSGG+D+ ++ WD  L+      SR+L +  +R L  D
Sbjct:  126 ILGTKEGKLELFELAS-----GSLLQSEEA----HGGAVWSLCLNPDKRGLVSGGADKAVKFWDFELLAQPGKTSRQLCLAESRCLLLD 205          
BLAST of mRNA_H-paniculata_contig474.11775.1 vs. uniprot
Match: A0A5A9P067_9TELE (WD repeat-containing protein 3 n=1 Tax=Triplophysa tibetana TaxID=1572043 RepID=A0A5A9P067_9TELE)

HSP 1 Score: 60.5 bits (145), Expect = 6.530e-6
Identity = 31/90 (34.44%), Postives = 55/90 (61.11%), Query Frame = 0
Query:  367 VSGSRDGHIKVWEIASEPHPPGAALQTAEADFEAHHGVIFSLCMSPDARILVSGGSDRCIRVWDLSLVV-----NSRRLAVNRARALWSD 451
            + G++ G I+++++AS      + L+T +A    H G ++S+C+SPD R +V+GG+D+ ++ WD  L+      N++RL VN  R L  D
Sbjct:  477 ILGTKSGKIQIFDLAS-----ASLLETTDA----HEGALWSMCLSPDQRGIVTGGADKTVKFWDFELIKDQDSGNNKRLTVNHMRTLQLD 557          
BLAST of mRNA_H-paniculata_contig474.11775.1 vs. uniprot
Match: A0A1B7TJ73_9ASCO (WD40 repeat-like protein n=1 Tax=Hanseniaspora valbyensis NRRL Y-1626 TaxID=766949 RepID=A0A1B7TJ73_9ASCO)

HSP 1 Score: 58.9 bits (141), Expect = 8.000e-6
Identity = 32/66 (48.48%), Postives = 38/66 (57.58%), Query Frame = 0
Query:   21 VSEIFGHESYVTSVTFFG----ENYDRIVSGSYDEVAKLWDLKTKRCLRKFIGHTDGVTVVMQGPD 82
            +S + GH  +VTSV  F     EN+    S S D+ AKLWDLKT RCL  F GH  G+ VV   PD
Sbjct:  140 ISTLLGHNDWVTSVKAFTPAKTENH-LAFSASSDKTAKLWDLKTSRCLADFKGHNGGINVVATSPD 204          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig474.11775.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7H8_9PHAE8.390e-9448.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF89_ECTSI4.530e-3337.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LF88_ECTSI2.470e-2463.10WD repeat-containing protein (Partial) (Fragment) ... [more]
A0A3Q3E665_HIPCM3.980e-737.08WD repeat domain 3 n=3 Tax=Hippocampus comes TaxID... [more]
A0A2D0R5D1_ICTPU2.840e-635.56WD repeat-containing protein 3 n=7 Tax=Siluroidei ... [more]
A0A6P8GI26_CLUHA2.840e-635.16WD repeat-containing protein 3 n=3 Tax=Clupeidae T... [more]
A0A3B4C1D5_PYGNA3.740e-635.56WD repeat domain 3 n=2 Tax=Pygocentrus nattereri T... [more]
A0A8C4QVD1_EPTBU5.320e-637.08Utp12 domain-containing protein n=1 Tax=Eptatretus... [more]
A0A5A9P067_9TELE6.530e-634.44WD repeat-containing protein 3 n=1 Tax=Triplophysa... [more]
A0A1B7TJ73_9ASCO8.000e-648.48WD40 repeat-like protein n=1 Tax=Hanseniaspora val... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 44..58
score: 38.21
coord: 85..99
score: 36.84
coord: 417..431
score: 40.42
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 60..98
e-value: 6.4E-8
score: 42.3
coord: 17..57
e-value: 1.0E-5
score: 35.0
coord: 391..430
e-value: 1.4E-7
score: 41.1
coord: 340..379
e-value: 7.0E-5
score: 32.2
coord: 101..139
e-value: 9.3E-6
score: 35.1
coord: 250..297
e-value: 170.0
score: 2.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 398..430
e-value: 8.4E-6
score: 26.4
coord: 24..57
e-value: 0.043
score: 14.7
coord: 62..98
e-value: 1.8E-5
score: 25.4
coord: 102..139
e-value: 0.0054
score: 17.5
coord: 347..378
e-value: 3.1E-5
score: 24.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 24..66
score: 12.714
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 347..382
score: 12.413
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 67..107
score: 12.714
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 398..432
score: 14.753
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 11..166
e-value: 8.1E-34
score: 118.8
NoneNo IPR availablePANTHERPTHR19848:SF4E3 UBIQUITIN-PROTEIN LIGASE TRAF7coord: 255..431
NoneNo IPR availablePANTHERPTHR19848:SF4E3 UBIQUITIN-PROTEIN LIGASE TRAF7coord: 24..146
NoneNo IPR availablePANTHERPTHR19848WD40 REPEAT PROTEINcoord: 24..146
coord: 255..431
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 85..99
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 44..58
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 417..431
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 347..439
score: 18.879
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 24..148
score: 25.707
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 20..431

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig474contigH-paniculata_contig474:11599..14485 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig474.11775.1mRNA_H-paniculata_contig474.11775.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig474 11368..15385 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig474.11775.1 ID=prot_H-paniculata_contig474.11775.1|Name=mRNA_H-paniculata_contig474.11775.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=515bp
MANLSYRQPKMPLANPPRWLVSEIFGHESYVTSVTFFGENYDRIVSGSYD
EVAKLWDLKTKRCLRKFIGHTDGVTVVMQGPDGRVLTASEDRTVRMWDGE
TGECVKVVRSHSGSVTGLCMAGPDRIVTGSTDKKLRIFDAGGNNVGEAEL
VSEIMAVASAATAPAAPPSRWPAKPKRSSASSSGSIASPSVAPLGKLKDG
ENKPAPSGPRFRIFACGGVHIPTPARPMLRSVDVDPTATSTAVAVDNSSH
FDMCTAYKDEPDGEEGVVSSVAVSAAGVSGSGTLIAGCYDKAIRVLRNVF
PAVLTVAEVVDADCLQSAGAEACSEGEDGGDGVASKAELPHASMEILGRH
ADGVRAVAISANGRWGVSGSRDGHIKVWEIASEPHPPGAALQTAEADFEA
HHGVIFSLCMSPDARILVSGGSDRCIRVWDLSLVVNSRRLAVNRARALWS
DGRIRRARAKRSSSSSANGMGGSADGSGGGALKAFNSSREQRQHIFEGLF
ALPEIIYAKVLMYL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf