prot_H-paniculata_contig4738.11771.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4738.11771.1
Unique Nameprot_H-paniculata_contig4738.11771.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length208
Homology
BLAST of mRNA_H-paniculata_contig4738.11771.1 vs. uniprot
Match: D7FX58_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX58_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 5.270e-100
Identity = 150/179 (83.80%), Postives = 160/179 (89.39%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKLKDTVRRKLIEEVEGTSVGNLGFVITVTEVTDEHITLGTIEFDTGFVNVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDEIAGGYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTVGAELVRKFEHSPVFSGRAGLVSGP 179
            MFYLKEL+RPML+PPSDFGPKLKDT+RRKLIEEVEGTSVG+LGFVITVT V+D+ I +GTIEFDTGF NV+ VYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPD+IAGGYD VGDMWVSSEDSDTEIK+GCGVRLRIIGVTVGAEL         F    GLVSGP
Sbjct:    1 MFYLKELRRPMLVPPSDFGPKLKDTIRRKLIEEVEGTSVGSLGFVITVTNVSDDQIQMGTIEFDTGFANVLVVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTVGAELKAVGSIKDDF---LGLVSGP 176          
BLAST of mRNA_H-paniculata_contig4738.11771.1 vs. uniprot
Match: A0A835YX29_9STRA (S1 motif domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX29_9STRA)

HSP 1 Score: 199 bits (506), Expect = 8.640e-62
Identity = 103/162 (63.58%), Postives = 125/162 (77.16%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKLKDTVRRKLIEEVEGTSVGNLGFVITVTEVTDEHITL--GTIEFDTGFVNVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDEIAG-GYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTVGAEL 159
            MFYLK LK+ +L+ P  FGP L + V R L+E+VEG S+GN GFVI+V      + ++  GTIE+DTG  N++  Y AICFRPF NEVLDA VS+VT+LGFFAEVGPLE+FVSR  MP++IA  GYD+VGDMWVS ED + EIK GCGVRLRIIG+TV AEL
Sbjct:    1 MFYLKTLKKDLLLEPQFFGPNLHEVVGRLLLEQVEGMSLGNDGFVISVFSQNSANTSMEMGTIEYDTGAANIICTYEAICFRPFRNEVLDATVSNVTDLGFFAEVGPLEIFVSRFNMPEDIANTGYDSVGDMWVS-EDKEVEIKKGCGVRLRIIGITVEAEL 161          
BLAST of mRNA_H-paniculata_contig4738.11771.1 vs. uniprot
Match: A0A6S9LV75_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LV75_HETAK)

HSP 1 Score: 195 bits (495), Expect = 4.160e-60
Identity = 102/181 (56.35%), Postives = 131/181 (72.38%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKLKDTVRRKLIEEVEGTSVGNLGFVITVTEVTDEHITLGTIEFDTGFVNVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDEIAGGYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTVGAELVRKFEHSPVFSGRAGLVSGPES 181
            MF+LK+L R + +PP+  GPKLK+T+RR+LIEEVEG +VG LG+VITVTE+ DE I+ G IE+D+GFV    VY AICFRPF +EVLDA +S VTELGFFA+VGPL VFVSR  MP ++  GYD   ++W  SED + E++AG GVRLRI+G++V A  +       V     GLVS  E+
Sbjct:    1 MFFLKQLTRELQLPPAFLGPKLKETIRRRLIEEVEGQAVGKLGYVITVTEMKDEAISQGLIEYDSGFVTFNVVYSAICFRPFRDEVLDATISSVTELGFFADVGPLTVFVSRHAMPADLQEGYDPARELW-QSEDREVELRAGAGVRLRIMGLSVDAADISAI--GTVADDYLGLVSAAEA 178          
BLAST of mRNA_H-paniculata_contig4738.11771.1 vs. uniprot
Match: A0A7S2Y2T3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2T3_9STRA)

HSP 1 Score: 183 bits (465), Expect = 1.470e-55
Identity = 97/180 (53.89%), Postives = 126/180 (70.00%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKLKDTVRRKLIEEVEGTSVGNLGFVITVTEVTDEHITLGTIEFDTGFVNVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDEIAGGYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTVGAELVRKFEHSPVFSGRAGLVSGPE 180
            MF+LKEL R +L+PP+  GPK+K+T+RR+LIEEVEGT +G  G+VITVTEV +E +  G I  + G V     Y AICFRPF  EVLDA V+ VTELGFFAEVGPL+VFVSR  MP ++  G+DA  ++WVS ED + E++ GCGVRLRI+G++V A  +       +     GL+S  E
Sbjct:    1 MFFLKELTRELLLPPAYLGPKIKETIRRRLIEEVEGTCLGKYGYVITVTEVKEEGMKTGVISNEFGEVIFHISYDAICFRPFKGEVLDANVTVVTELGFFAEVGPLQVFVSRHAMPQDLQEGFDAANEVWVS-EDKEVELRQGCGVRLRIMGLSVDAADISAI--GTIKDDYLGLISAAE 177          
BLAST of mRNA_H-paniculata_contig4738.11771.1 vs. uniprot
Match: A0A225WVR4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WVR4_9STRA)

HSP 1 Score: 177 bits (450), Expect = 2.010e-53
Identity = 93/162 (57.41%), Postives = 120/162 (74.07%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKLKDTVRRKLIEEVEGTSVGNLGFVITVTEVTDEHITLGTIEFDTGFVNVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDEIAGGYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTVGA-ELVR 161
            MF+LK+L R +L+ P  FGPKL D +R +LIEEVEGTS+G  G+VITVTEV DE I  G I+ ++GFV     YRAI FRPF N+VLDA V+ V +LGFFA+VGPL+VFVSR  MP ++  GYD   + W+S +D + EI+ GCGVRL+I+GV+V   E+VR
Sbjct:    1 MFFLKQLSRDLLLHPMHFGPKLHDIIRLRLIEEVEGTSMGKYGYVITVTEVRDEDIGKGVIQDNSGFVCFNIRYRAILFRPFKNQVLDAVVTVVNQLGFFADVGPLQVFVSRHAMPTDLNNGYDHESNAWIS-DDREVEIRKGCGVRLKIMGVSVDVTEIVR 161          
BLAST of mRNA_H-paniculata_contig4738.11771.1 vs. uniprot
Match: K3XAJ8_GLOUD (Uncharacterized protein n=27 Tax=Oomycota TaxID=4762 RepID=K3XAJ8_GLOUD)

HSP 1 Score: 176 bits (447), Expect = 7.130e-53
Identity = 90/155 (58.06%), Postives = 116/155 (74.84%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKLKDTVRRKLIEEVEGTSVGNLGFVITVTEVTDEHITLGTIEFDTGFVNVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDEIAGGYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTV 155
            MF+LK+L R +L+ P  FGPKL D +R +LIEEVEGTS+G  G+VITVTEV DE I  G I+ ++GFV     YRAI FRPF N+VLDA V+ V +LGFFA+VGPL+VFVSR  MP ++  GYD   + W+S +D + EI+ GCGVRL+I+GV+V
Sbjct:    1 MFFLKQLSRDLLLHPMHFGPKLHDIIRLRLIEEVEGTSMGKYGYVITVTEVRDEDIGKGVIQDNSGFVCFNIRYRAILFRPFKNQVLDAVVTVVNQLGFFADVGPLQVFVSRHAMPTDLNNGYDHENNAWIS-DDREVEIRKGCGVRLKIMGVSV 154          
BLAST of mRNA_H-paniculata_contig4738.11771.1 vs. uniprot
Match: A0A024TU38_9STRA (Uncharacterized protein n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TU38_9STRA)

HSP 1 Score: 171 bits (433), Expect = 9.110e-51
Identity = 89/155 (57.42%), Postives = 113/155 (72.90%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKLKDTVRRKLIEEVEGTSVGNLGFVITVTEVTDEHITLGTIEFDTGFVNVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDEIAGGYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTV 155
            MF+LK+LKR +L+ P  FGPKL D +R +LIEEVEGTS+G  G+VI VTEV DE I  G I+ ++GFV     YRAI FRPF NEVLDA V+ V +LGFFAEVGPL+VFVSR  M  ++  GYD     W+S +D + EI+ G GVRL+I+GV++
Sbjct:    1 MFFLKQLKRELLLHPMHFGPKLHDIIRLRLIEEVEGTSLGKFGYVIAVTEVRDEDIGQGVIQDNSGFVCFNIAYRAILFRPFKNEVLDAVVTVVNQLGFFAEVGPLQVFVSRHAMSTDLNEGYDHEQSAWIS-QDREVEIRKGVGVRLKIMGVSI 154          
BLAST of mRNA_H-paniculata_contig4738.11771.1 vs. uniprot
Match: A0A425DP05_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425DP05_9STRA)

HSP 1 Score: 170 bits (430), Expect = 1.300e-49
Identity = 88/155 (56.77%), Postives = 113/155 (72.90%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKLKDTVRRKLIEEVEGTSVGNLGFVITVTEVTDEHITLGTIEFDTGFVNVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDEIAGGYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTV 155
            MF+LK+LKR +L+ P  FGPKL D +R +LIEEVEGTS+G  G+VI VTEV DE I  G I+ ++G+V     YRAI FRPF NEVLDA V+ V +LGFFAEVGPL+VFVSR  M  ++  GYD     W+S +D + EI+ G GVRL+I+GV++
Sbjct:    1 MFFLKQLKRELLLHPMHFGPKLHDIIRLRLIEEVEGTSLGKFGYVIAVTEVRDEDIGQGVIQDNSGYVCFNIAYRAILFRPFKNEVLDAVVTVVNQLGFFAEVGPLQVFVSRHAMSTDLNEGYDHEQSAWIS-QDREVEIRKGVGVRLKIMGVSI 154          
BLAST of mRNA_H-paniculata_contig4738.11771.1 vs. uniprot
Match: A0A024GUM2_9STRA (ING domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GUM2_9STRA)

HSP 1 Score: 174 bits (441), Expect = 6.380e-49
Identity = 88/155 (56.77%), Postives = 114/155 (73.55%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKLKDTVRRKLIEEVEGTSVGNLGFVITVTEVTDEHITLGTIEFDTGFVNVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDEIAGGYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTV 155
            MF+LK+L R +L+ P  FGPKL D +R +LIEEVEGTS+G  G+VITVTEV DE I  G I+  +G+V     YRAI FRPF N+VLDA VS V +LGFFA+VGPL+VFVSR  MP ++  GYD   + W+S +D + EI+  CG+RLRI+GV++
Sbjct:  265 MFFLKQLSRDLLLHPMHFGPKLHDIIRLRLIEEVEGTSMGKYGYVITVTEVRDEDIGKGVIQDSSGYVCFNIRYRAILFRPFKNQVLDAVVSVVNQLGFFADVGPLQVFVSRHAMPTDLNNGYDHENNAWIS-DDREVEIRKSCGIRLRIMGVSI 418          
BLAST of mRNA_H-paniculata_contig4738.11771.1 vs. uniprot
Match: A0A662WW13_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WW13_9STRA)

HSP 1 Score: 179 bits (454), Expect = 1.350e-48
Identity = 97/176 (55.11%), Postives = 125/176 (71.02%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKLKDTVRRKLIEEVEGTSVGNLGFVITVTEVTDEHITLGTIEFDTGFVNVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDEIAGGYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTVGA-ELVRKF-EHSPVFSGRAG 174
            MF+LK+L R +L+ P  FGPKL D +R +LIEEVEGTS+G  G+VITVTEV DE I  G I+ ++GFV     YRAI FRPF N+VLDA V+ V +LGFFA+VGPL+VFVSR  MP ++  GYD   + W+S +D + EI+ GCGVRL+I+GV+V   E+VR+     P  S  AG
Sbjct:    1 MFFLKQLSRDLLLHPMHFGPKLHDIIRLRLIEEVEGTSMGKYGYVITVTEVRDEDIGKGVIQDNSGFVCFNIRYRAILFRPFKNQVLDAVVTVVNQLGFFADVGPLQVFVSRHAMPTDLNNGYDHESNAWIS-DDREVEIRKGCGVRLKIMGVSVDVTEIVRELASFRPTTSKEAG 175          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4738.11771.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX58_ECTSI5.270e-10083.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YX29_9STRA8.640e-6263.58S1 motif domain-containing protein n=1 Tax=Tribone... [more]
A0A6S9LV75_HETAK4.160e-6056.35Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2Y2T3_9STRA1.470e-5553.89Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A225WVR4_9STRA2.010e-5357.41Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
K3XAJ8_GLOUD7.130e-5358.06Uncharacterized protein n=27 Tax=Oomycota TaxID=47... [more]
A0A024TU38_9STRA9.110e-5157.42Uncharacterized protein n=8 Tax=Saprolegniaceae Ta... [more]
A0A425DP05_9STRA1.300e-4956.77Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A024GUM2_9STRA6.380e-4956.77ING domain-containing protein n=1 Tax=Albugo candi... [more]
A0A662WW13_9STRA1.350e-4855.11Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 84..162
e-value: 2.1E-18
score: 68.0
NoneNo IPR availablePANTHERPTHR12709:SF4DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7coord: 1..157
NoneNo IPR availablePANTHERPTHR12709DNA-DIRECTED RNA POLYMERASE II, IIIcoord: 1..157
IPR005576RNA polymerase Rpb7-like , N-terminalPFAMPF03876SHS2_Rpb7-Ncoord: 13..79
e-value: 1.9E-10
score: 40.9
IPR003029S1 domainPFAMPF00575S1coord: 80..156
e-value: 1.2E-8
score: 35.2
IPR036898RNA polymerase Rpb7-like, N-terminal domain superfamilyGENE3D3.30.1490.120coord: 1..83
e-value: 1.7E-22
score: 81.5
IPR036898RNA polymerase Rpb7-like, N-terminal domain superfamilySUPERFAMILY88798N-terminal, heterodimerisation domain of RBP7 (RpoE)coord: 1..80
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 81..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4738contigH-paniculata_contig4738:3316..7184 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4738.11771.1mRNA_H-paniculata_contig4738.11771.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4738 3028..8011 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4738.11771.1 ID=prot_H-paniculata_contig4738.11771.1|Name=mRNA_H-paniculata_contig4738.11771.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=208bp
MFYLKELKRPMLIPPSDFGPKLKDTVRRKLIEEVEGTSVGNLGFVITVTE
VTDEHITLGTIEFDTGFVNVVAVYRAICFRPFVNEVLDAAVSHVTELGFF
AEVGPLEVFVSRLGMPDEIAGGYDAVGDMWVSSEDSDTEIKAGCGVRLRI
IGVTVGAELVRKFEHSPVFSGRAGLVSGPESCREHQGRFPWTRVWACIAT
GVFSTRW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005576Rpb7-like_N
IPR003029S1_domain
IPR036898RNA_pol_Rpb7-like_N_sf
IPR012340NA-bd_OB-fold