prot_H-paniculata_contig47293.11754.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig47293.11754.1
Unique Nameprot_H-paniculata_contig47293.11754.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length282
Homology
BLAST of mRNA_H-paniculata_contig47293.11754.1 vs. uniprot
Match: A0A251T6N3_HELAN (Putative zinc finger, CCHC-type n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251T6N3_HELAN)

HSP 1 Score: 132 bits (332), Expect = 4.940e-31
Identity = 95/293 (32.42%), Postives = 155/293 (52.90%), Query Frame = 0
Query:    1 MESSKSHVHWIIDSGCTGHHLTPQRDLFQIFRQVVRGPIAAADEGGLDVEGQGDVEGLIWTAEGAIRIVFCNAFYVPEASDSILSVERMVSQGMEAYFGWERRRL--YCNGITIPFEHTSRKEYSLRVIVGDEVEVQAAKRAIEKQVKLL-HERLGHVRDLPTVARQ------QGI-RLSGKLGVCSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPV-DKSFGGCRFAIISVDDYSRMRKVYILRQKSEALWALKLFERGVARANGLWIKRLRSDQGGEYTGKPFRQF 282
            ME + ++ HW +DSGC+ +H+T  R+LF    + +R  +   D   L+V G G+++  I      ++ VF    YV     ++LSV +++ +G    F   +  +    NG     + T+ K + L      E ++  A     K+  +L H+R GHV +L T+A         G+ ++S    +C  C  GK +++      + + T+PL+L+H+DI GP+  +S GGCR+ I  +DDYSR   VY L+ KSEAL   KLF+      +   IK LR+D+GGEY GK F+++
Sbjct:  269 MEETDNNDHWYLDSGCS-NHMTGNRNLFTSLDESIRKEVRTGDVKKLEVLGSGEIKIAIQGQNKRVKDVF----YVKGLRHNLLSVGQLIKRGYTITFQENKCIIKDVRNGTLGEIKMTNNKMFPLH----PEKDLTLALTMTTKETSILWHKRYGHV-NLDTLADMGNKDIVYGLPKISRDTSICEGCVSGKQARKVFPNKTKWQATKPLQLIHSDICGPMRTESIGGCRYFITFIDDYSRKTWVYFLKLKSEALSYFKLFKALSENQSDHTIKTLRTDRGGEYCGKSFQEY 551          
BLAST of mRNA_H-paniculata_contig47293.11754.1 vs. uniprot
Match: A0A251TN47_HELAN (Putative zinc finger, CCHC-type n=2 Tax=Helianthus annuus TaxID=4232 RepID=A0A251TN47_HELAN)

HSP 1 Score: 129 bits (323), Expect = 7.770e-30
Identity = 94/285 (32.98%), Postives = 144/285 (50.53%), Query Frame = 0
Query:   10 WIIDSGCTGHHLTPQRDLFQIFRQVVRGPIAAADEGGLDVEGQGDVEGLIWTAEGAIRIVFCNAFYVPEASDSILSVERMVSQGMEAYFGWERRRLY-----CNGITIPFEHTSRKEYSLRVIVGDEVEVQAAKRAIEKQVKLLHERLGHVR-----DLPTVARQQGI-RLSGKLGVCSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPVDK-SFGGCRFAIISVDDYSRMRKVYILRQKSEALWALKLFERGVARANGLWIKRLRSDQGGEYTGKPFRQF 282
            W +DSGC+ +H+T  +DLF       R  +   D+  LDV G GDV   I   E  I     N FYV     ++LSV ++V +G +  F  +   ++     C G+    + T  K Y L +    +V  +      +    L H R GH+      D+       G+ +++    VC  C  GK +++P  K  + R +EPL+LVH+DI GP++  S GGC++ I  +DD+SR   VY L+ KS+AL   K+F++ V       IK +R+D+GGEY G  F+ F
Sbjct:  307 WYLDSGCS-NHMTGNKDLFVNLNNSERREVRTGDDKRLDVLGCGDVNVKIKGHEKRIP----NVFYVAGLKHNLLSVGQLVQKGYDVCFNDKGCVIHDSSGRCIGVV---KMTGNKMYPLNL--NHDVIPRVCNMTTQDNSTLWHRRYGHLNLETLHDMGKNGTVNGLPKINKSEHVCEGCVFGKHARKPFSKKAKWRASEPLQLVHSDICGPMNTPSIGGCKYFITFIDDFSRKTWVYFLKLKSDALHYFKIFKQLVENQIERKIKGIRTDRGGEYCGHEFQNF 581          
BLAST of mRNA_H-paniculata_contig47293.11754.1 vs. uniprot
Match: A0A251SDS7_HELAN (Putative zinc finger, CCHC-type n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251SDS7_HELAN)

HSP 1 Score: 127 bits (320), Expect = 1.690e-29
Identity = 95/292 (32.53%), Postives = 152/292 (52.05%), Query Frame = 0
Query:    1 MESSKSHVHWIIDSGCTGHHLTPQRDLFQIFRQVVRGPIAAADEGGLDVEGQGDVEGLIWTAEGAIRIVFCNAFYVPEASDSILSVERMVSQGMEAYFGWERRRL--YCNGITIPFEHTSRKEYSLRVIVGDEVEVQAAKRAIEKQVKLLHERLGHVRDLPTVARQ------QGI-RLSGKLGVCSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPV-DKSFGGCRFAIISVDDYSRMRKVYILRQKSEALWALKLFERGVARANGLWIKRLRSDQGGEYTGKPFRQF 282
            ME + +  HW +DSGC+ +H+T  RDLF    + +R  +   D+  L+V G G+V  +I      I+    N FYV     ++LSV +++ +G    F   +  +    N        T+ K + L    G ++ + A     ++   L H+R GHV +L T+A         G+ ++S  + +C  C  GK +++      + + T+PL+L+H+DI GP+  +S  GCR+ I  +DDYSR   VY L+ KSEAL   KLF+      +   IK LR+D+GGEY GK F+ +
Sbjct:  349 MEETVNDDHWYLDSGCS-NHMTGNRDLFITLDESIRKEVRTGDDKKLEVLGSGEVMIIIQGRSKRIQ----NVFYVKGLRHNLLSVGQLIKKGYMVKFQEGKCIIKDVRNETLGVIRMTNNKMFPLNP--GKDLTL-ALTMTTKETSTLWHKRYGHV-NLDTLADMGNKDLVYGLPKISRDISICEGCISGKQARKGFPNKTKWQATKPLQLIHSDICGPMRTESISGCRYFITFIDDYSRKTWVYFLKLKSEALNYFKLFKALTENQSDHMIKTLRTDRGGEYCGKLFQDY 631          
BLAST of mRNA_H-paniculata_contig47293.11754.1 vs. uniprot
Match: UPI001652EAC1 (uncharacterized protein LOC110906461 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI001652EAC1)

HSP 1 Score: 127 bits (320), Expect = 1.950e-29
Identity = 95/292 (32.53%), Postives = 152/292 (52.05%), Query Frame = 0
Query:    1 MESSKSHVHWIIDSGCTGHHLTPQRDLFQIFRQVVRGPIAAADEGGLDVEGQGDVEGLIWTAEGAIRIVFCNAFYVPEASDSILSVERMVSQGMEAYFGWERRRL--YCNGITIPFEHTSRKEYSLRVIVGDEVEVQAAKRAIEKQVKLLHERLGHVRDLPTVARQ------QGI-RLSGKLGVCSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPV-DKSFGGCRFAIISVDDYSRMRKVYILRQKSEALWALKLFERGVARANGLWIKRLRSDQGGEYTGKPFRQF 282
            ME + +  HW +DSGC+ +H+T  RDLF    + +R  +   D+  L+V G G+V  +I      I+    N FYV     ++LSV +++ +G    F   +  +    N        T+ K + L    G ++ + A     ++   L H+R GHV +L T+A         G+ ++S  + +C  C  GK +++      + + T+PL+L+H+DI GP+  +S  GCR+ I  +DDYSR   VY L+ KSEAL   KLF+      +   IK LR+D+GGEY GK F+ +
Sbjct:  355 MEETVNDDHWYLDSGCS-NHMTGNRDLFITLDESIRKEVRTGDDKKLEVLGSGEVMIIIQGRSKRIQ----NVFYVKGLRHNLLSVGQLIKKGYMVKFQEGKCIIKDVRNETLGVIRMTNNKMFPLNP--GKDLTL-ALTMTTKETSTLWHKRYGHV-NLDTLADMGNKDLVYGLPKISRDISICEGCISGKQARKGFPNKTKWQATKPLQLIHSDICGPMRTESISGCRYFITFIDDYSRKTWVYFLKLKSEALNYFKLFKALTENQSDHMIKTLRTDRGGEYCGKLFQDY 637          
BLAST of mRNA_H-paniculata_contig47293.11754.1 vs. uniprot
Match: A0A1X7SX46_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SX46_AMPQE)

HSP 1 Score: 127 bits (318), Expect = 3.010e-29
Identity = 95/285 (33.33%), Postives = 145/285 (50.88%), Query Frame = 0
Query:   10 WIIDSGCTGHHLTPQRDLFQIFRQV-VRGPIAAADEGGLDVEGQGDVE-GLIWTAEGAIRIVFCNAFYVPEASDSILSVERMVSQGMEAYFGWERRRLYCNGITIPFEHTSRKEYSLRVIVGDEVEVQAAKRAIEKQ--VKLLHERLGHV-----RDLPTVARQQGIRL--SGKLGVCSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPVDK-SFGGCRFAIISVDDYSRMRKVYILRQKSEALWALKLFERGVARANGLWIKRLRSDQGGEYTGKPFRQF 282
            W+IDSG T H +T  + L + + +  V   ++  D   ++ EG GD+E  +I+           N  YVP+ + ++ SV   VS+G    FG  R  +      +    + R +  L V+  + VE Q+A  A ++     L H RLGH+     +DL T    +G+    S  L  C +C +GK  +QP K   E  +T  L+LVH+D+ GP+   S GG R+ +   DD+SR  ++Y+++ KSEAL   + FE  V    GL I  LR+D GGEY  K F +F
Sbjct:  172 WLIDSGATSH-MTYSKGLLRHYHKFDVPQRVSLGDGRMVEAEGSGDIELDMIFKVSKKKGCTMKNVLYVPKLTSNLFSVRAAVSKGNHIRFGAARCWIKDKNRKLIGMGSLRNK--LYVLDCEPVEPQSASVASQEASTADLWHRRLGHLGKQQLKDLATRELLKGVTSFRSNDLSFCESCIEGKMHRQPFKSSGEIHSTRKLQLVHSDVCGPMPTDSLGGKRYFVSFTDDFSRCSQIYLMKHKSEALNKFREFEAMVKNETGLSICTLRTDNGGEYVSKEFEEF 453          
BLAST of mRNA_H-paniculata_contig47293.11754.1 vs. uniprot
Match: UPI00142E428A (uncharacterized protein LOC108871170 n=2 Tax=Brassica campestris TaxID=3711 RepID=UPI00142E428A)

HSP 1 Score: 126 bits (317), Expect = 4.850e-29
Identity = 93/289 (32.18%), Postives = 147/289 (50.87%), Query Frame = 0
Query:   10 WIIDSGCTGHHLTPQRDLFQIFRQVVRGPIAAADEGGLDVEGQGDVEGLIWTAEGAIRIVFCNAFYVPEASDSILSVERMVSQGMEAYFGWER--------RRLYCNGITIPFEHTSRKEYSLRVIVGDEVEVQAAKRAIEK-QVKLLHERLGHVRDLPTVARQQGIRLSG------KLGVCSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPVD-KSFGGCRFAIISVDDYSRMRKVYILRQKSEALWALKLFERGVARANGLWIKRLRSDQGGEYTGKPFRQF 282
            W++DSG T +H+T +   F    + ++ PI   +   +   G+GD+  +    +  IR    N F VP  + ++LSV ++VS G    F  +R        RR+    + IP  H   K Y +R+      +V+ A  A E+ +++  H+RLGHV D      Q    + G      K   C AC  GK S++   K  + +T E LE+VHTD+ GP+  +S  G R+ ++ +DD++ M  VY ++QKSE     K F+  V + +   IK LRSD GGE+T + F +F
Sbjct:  319 WLVDSGAT-NHMTKEESYFSKLDRSIKVPIKIGNGSTVMTAGKGDITVMTKGGKKTIR----NVFLVPGLAKNLLSVPQIVSSGYRVSFQEKRCIIDDAKGRRI----MDIPMTH---KSYRIRM---SSAQVEEALSASEQGKMETWHKRLGHVGDKRLQQMQDKDLVKGLPKFKVKKEACEACRLGKQSRKSFPKESQTKTREKLEIVHTDVCGPMQHQSVDGSRYFLLFLDDHTHMCWVYFMKQKSETFSLFKKFKAMVEKQSDCTIKTLRSDGGGEFTSREFNRF 592          
BLAST of mRNA_H-paniculata_contig47293.11754.1 vs. uniprot
Match: A0A6D2HJM6_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2HJM6_9BRAS)

HSP 1 Score: 126 bits (317), Expect = 4.850e-29
Identity = 90/281 (32.03%), Postives = 144/281 (51.25%), Query Frame = 0
Query:   10 WIIDSGCTGHHLTPQRDLFQIFRQVVRGPIAAADEGGLDVEGQGDVEGLIWTAEGAIRIVFCNAFYVPEASDSILSVERMVSQGMEAYFGWERRRLY-CNGITIPFEHTSRKEYSLRVIVGDEVEVQAAKRAIEKQVKLLHERLGHVRDLPTVARQQGIRLSG------KLGVCSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPV-DKSFGGCRFAIISVDDYSRMRKVYILRQKSEALWALKLFERGVARANGLWIKRLRSDQGGEYTGKPFRQF 282
            W++DSGCT +H+T +   F    + V+ PI   +   +   G+GD+   + T  G  + +  N F VP    ++LSV ++ S G +  F  +R  ++  NG  I     + K + +++     VE +A    +  + +  H+RLGHV        Q    + G      +   C AC  GK S++   K  + +T E LE+VHTD+ GP+ ++S  G R+ ++ +DDY+ M  VY L+QKSE     K F+  V + +G  IK LRSD GGE+T   F +F
Sbjct:  326 WLVDSGCT-NHMTKEERYFSSINKSVKVPIRVGNGDIVMTVGKGDI--TVMTNHG--KRIIKNVFLVPGLEKNLLSVPQIFSSGYQVRFEDKRCIIHDANGKKIMDIGMTNKSFKIKL---SSVEEEAMTANVHME-ETWHKRLGHVGKRRLQEMQDKDLVKGLPSFKVEKEACKACNLGKQSRKSFPKESQTKTKEKLEIVHTDVCGPMQNQSIDGSRYYVLFLDDYTHMCWVYFLKQKSETFLKFKKFKAMVEKQSGCVIKTLRSDGGGEFTSHEFNRF 597          
BLAST of mRNA_H-paniculata_contig47293.11754.1 vs. uniprot
Match: A0A151S1T9_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151S1T9_CAJCA)

HSP 1 Score: 120 bits (302), Expect = 6.060e-29
Identity = 87/276 (31.52%), Postives = 149/276 (53.99%), Query Frame = 0
Query:   10 WIIDSGCTGHHLTPQRDLFQIFRQVVRGPIAAADEGGLDVEGQGDVEGLIWTAEGAIRIVFCNAFYVPEASDSILSVERMVSQGMEAYFGWERRRLYCNGITIPFEHTSRKEYSLRVIVGDEVEVQAAKRAIEKQVKLLHERLGHVRD--LPTVARQ---QGIRLSGKLGVCSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPVD-KSFGGCRFAIISVDDYSRMRKVYILRQKSEALWALKLFERGVARANGLWIKRLRSDQGGEYTGKPF 279
            WI+DSG T  H+TP+++ F  +     G +  +++G   V G GDV   + T  G ++++     + P+   +++SV+ +   G + +FG  + +L    + +     + K Y  + +V  +     +  A++ +  L H RL H+ +  L  +A++   QG++ S +L  CS C  GK ++   KK+   R +E L+LVH+D+ GP+  KSF G  + +I +DD SR   VY L++K + L   K F   V R +G  +KR+R+D GGEY G PF
Sbjct:    2 WIVDSGAT-LHVTPRKEFFTSYTSGDFGVLKMSNDGVSKVIGVGDV--CLQTNMG-MQLLLRGVKHAPDVRFNLISVQILDDGGYDNHFGSGKWKLTKGNLVVAKGEKNSKLYWTKALVAKD-----SVNAMDMEASLWHRRLSHISEKGLNCLAQKDVLQGLK-SAELEKCSHCMAGKQTRVSFKKHPPSRKSELLQLVHSDVCGPLKVKSFSGALYFVIFIDDCSRKLWVYTLQRKDQVLERFKQFHALVERQSGKKLKRIRTDNGGEYCG-PF 266          
BLAST of mRNA_H-paniculata_contig47293.11754.1 vs. uniprot
Match: A0A151QP37_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151QP37_CAJCA)

HSP 1 Score: 124 bits (312), Expect = 2.060e-28
Identity = 91/287 (31.71%), Postives = 150/287 (52.26%), Query Frame = 0
Query:   10 WIIDSGCTGHHLTPQRDLFQIFRQVVRGPIAAADEGGLDVEGQGDVEGLIWTAEGAIRIVFCNAFYVPEASDSILSVERMVSQGMEAYFGWERRRLYCNGITIPFEHTSR-------KEYSLRVIVGDEVEVQAAKRAIEKQVKLLHERLGHV--RDLPTVARQQGIR----LSGKLGVCSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPVD-KSFGGCRFAIISVDDYSRMRKVYILRQKSEALWALKLFERGVARANGLWIKRLRSDQGGEYTGKPFRQF 282
            W +DSG + +H+  +R +F    + V+G +A  DE  + VEG+G+V  LI    G  + +  N +YVP    +ILS+ +++ +G +        +L  N ++I  ++TSR           + V+       Q  K   + Q  L H R GH+  + L  ++++  +R    ++    VC  C  GK  +    K  + R  +PLEL+HTD+ GP+  +S G   + +  +DD+SR   VY L++KSE     K F+  V + NGL IK LRSD+GGE+T K F+++
Sbjct:  268 WYLDSGAS-NHMCGKRSMFVELDESVKGNVAFGDESKVAVEGKGNV--LIRLKNGEHQFI-SNVYYVPSMKSNILSLGQLLEKGYDI-------QLKNNNLSIR-DNTSRFIAKVPMTRNRMFVLNIQSDGPQCLKMCYKDQSWLWHLRFGHLNFKGLELLSKKAMVRGLPCITHPNQVCEGCLLGKQFRLSFPKESDSRAQKPLELIHTDVCGPIKPRSLGKSNYFLFFIDDFSRKTWVYFLKEKSEVFENFKKFKDNVEKENGLLIKALRSDRGGEFTSKEFQKY 542          
BLAST of mRNA_H-paniculata_contig47293.11754.1 vs. uniprot
Match: Q9M197_ARATH (Copia-type reverse transcriptase-like protein n=6 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9M197_ARATH)

HSP 1 Score: 124 bits (310), Expect = 4.060e-28
Identity = 87/295 (29.49%), Postives = 154/295 (52.20%), Query Frame = 0
Query:    2 ESSKSHVHWIIDSGCTGHHLTPQRDLFQIFRQVVRGPIAAADEGGLDVEGQGDVEGLIWTAEGAIRIVFCNAFYVPEASDSILSVERMVSQGMEAYFGWERRRLYCNGITIPFEHTS-------RKEYSLRVIVGDEVEVQAAKRAIEKQVKLLHERLGHVR--DLPTVARQQGIR----LSGKLGVCSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPVD-KSFGGCRFAIISVDDYSRMRKVYILRQKSEALWALKLFERGVARANGLWIKRLRSDQGGEYTGKPFRQF 282
            E  ++H  W +DSG + +H+  ++ +F    + VRG +A  DE  ++V+G+G++  LI    G  + +  N +Y+P    +ILS+ +++ +G +        RL  N ++I  + ++        K     + + +++  Q  K   +++  L H R GH+    L  ++R++ +R    ++    VC  C  G   K    K    R  +PLEL+HTD+ GP+  KS G   + ++ +DD+SR   VY L++KSE     K F+  V + +GL IK +RSD GGE+T K F ++
Sbjct:  328 EQEENHK-WYLDSGAS-NHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNI--LIRLKNGDHQFI-SNVYYIPSMKTNILSLGQLLEKGYDI-------RLKDNNLSIRDKESNLITKVPMSKNRMFVLNIRNDI-AQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGNQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTSKEFLKY 609          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig47293.11754.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A251T6N3_HELAN4.940e-3132.42Putative zinc finger, CCHC-type n=1 Tax=Helianthus... [more]
A0A251TN47_HELAN7.770e-3032.98Putative zinc finger, CCHC-type n=2 Tax=Helianthus... [more]
A0A251SDS7_HELAN1.690e-2932.53Putative zinc finger, CCHC-type n=1 Tax=Helianthus... [more]
UPI001652EAC11.950e-2932.53uncharacterized protein LOC110906461 n=1 Tax=Helia... [more]
A0A1X7SX46_AMPQE3.010e-2933.33Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]
UPI00142E428A4.850e-2932.18uncharacterized protein LOC108871170 n=2 Tax=Brass... [more]
A0A6D2HJM6_9BRAS4.850e-2932.03Uncharacterized protein n=1 Tax=Microthlaspi errat... [more]
A0A151S1T9_CAJCA6.060e-2931.52Retrovirus-related Pol polyprotein from transposon... [more]
A0A151QP37_CAJCA2.060e-2831.71Retrovirus-related Pol polyprotein from transposon... [more]
Q9M197_ARATH4.060e-2829.49Copia-type reverse transcriptase-like protein n=6 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 190..282
e-value: 2.2E-11
score: 45.3
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 198..282
e-value: 1.6E-9
score: 38.0
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 196..282
score: 12.147
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 63..282
NoneNo IPR availablePANTHERPTHR11439:SF250coord: 63..282
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 195..282

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig47293contigH-paniculata_contig47293:544..1464 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig47293.11754.1mRNA_H-paniculata_contig47293.11754.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig47293 544..1464 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig47293.11754.1 ID=prot_H-paniculata_contig47293.11754.1|Name=mRNA_H-paniculata_contig47293.11754.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=282bp
MESSKSHVHWIIDSGCTGHHLTPQRDLFQIFRQVVRGPIAAADEGGLDVE
GQGDVEGLIWTAEGAIRIVFCNAFYVPEASDSILSVERMVSQGMEAYFGW
ERRRLYCNGITIPFEHTSRKEYSLRVIVGDEVEVQAAKRAIEKQVKLLHE
RLGHVRDLPTVARQQGIRLSGKLGVCSACEKGKASKQPVKKYREERTTEP
LELVHTDIAGPVDKSFGGCRFAIISVDDYSRMRKVYILRQKSEALWALKL
FERGVARANGLWIKRLRSDQGGEYTGKPFRQF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf