prot_H-paniculata_contig47290.11753.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig47290.11753.1
Unique Nameprot_H-paniculata_contig47290.11753.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length166
Homology
BLAST of mRNA_H-paniculata_contig47290.11753.1 vs. uniprot
Match: A0A6H5K9W0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9W0_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 2.120e-29
Identity = 63/164 (38.41%), Postives = 95/164 (57.93%), Query Frame = 0
Query:    1 MHPTFKASARARGLITGEEECFICVEDASHFQSHRDLRGLLITLVLNGGPARRLWDESQDIRFVHFLLRMTLHDARHVALREIGLKLLMHGKSNVQVNFPATRN----------AFDHCSEILFATDHLPLRITERGHTYDTVLAAIHRRRGHPVTIDAPADTG 154
            +H TF+ +ARA+GL+TG+EE FIC+E+A  F+    LRGL +TL+L+GGPA +LW++ +D     F   +   DA   ALR I LKL  HGK+N Q+  P   +          +F+   +  +A    P   +E+   Y+T++ A+  ++  P  IDAPA TG
Sbjct:  122 VHVTFQDAARAQGLVTGQEEYFICMEEAITFEMPSQLRGLFVTLILDGGPAPKLWNDYKDHLIEDFTRTLDNTDACQEALRVIDLKLQHHGKTNTQLGLPEPSHRQTEYQRMVASFNPSQQTAYADRFEPGLTSEQRDVYNTIIDAVRNKQPQPFMIDAPAGTG 285          
BLAST of mRNA_H-paniculata_contig47290.11753.1 vs. uniprot
Match: A0A6H5L0I5_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0I5_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 1.290e-24
Identity = 60/169 (35.50%), Postives = 93/169 (55.03%), Query Frame = 0
Query:    1 MHPTFKASARARGLITGEEECFICVEDASHFQSHRDLRGLLITLVLNGGPARRLWDESQDIRFVHFLLRMTLHDARHVALREIGLKLLMHGKSNVQVNFPAT----------RNAFDHCSEILFATDHLPLRITERGHTYDTVLAAIHRRRGHPVTIDAPADTGKTFVE 159
            ++ TF+ +ARA G+I  ++E  IC+++A  F + R LR L +TL+L+G PA+ LW++          + M+  DA + ALR+I L L  HG++N  V  PA           ++ FD      F  +HL     E+ H YDTV++++     +   IDAPA TGKT+ E
Sbjct:  324 VYDTFQDAARAMGIIKHDDEYRICLQEAVIFNTGRQLRELFVTLILDGAPAKILWEQFNQDFTEDLRINMSDRDANNTALRQIDLVLQHHGRTNEVVGLPAVIHLDTEYIRFKHMFDPAQMSAFVDEHLANLTHEQRHVYDTVVSSVTSGASNLFMIDAPAGTGKTYTE 492          
BLAST of mRNA_H-paniculata_contig47290.11753.1 vs. uniprot
Match: A0A6H5JZJ6_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZJ6_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 1.530e-23
Identity = 59/169 (34.91%), Postives = 92/169 (54.44%), Query Frame = 0
Query:    1 MHPTFKASARARGLITGEEECFICVEDASHFQSHRDLRGLLITLVLNGGPARRLWDESQDIRFVHFLLRMTLHDARHVALREIGLKLLMHGKSNVQVNFPAT----------RNAFDHCSEILFATDHLPLRITERGHTYDTVLAAIHRRRGHPVTIDAPADTGKTFVE 159
            ++ TF+ +ARA G+I  ++E  IC+++A  F + R LR L +TL+L+G PA+ LW++          + M+  DA + ALR+I L L  HG++N  V   A           ++ FD      F  +HL     E+ H YDTV++++     +   IDAPA TGKT+ E
Sbjct:  161 VYDTFQDAARAMGIIKHDDEYRICLQEAVIFNTGRQLRELFVTLILDGAPAKILWEQFNQDFTEDLRINMSDRDANNTALRQIDLGLQHHGRTNEVVGLTAVVHLDTEYMRFKHMFDPAQMSAFVDEHLANLTHEQRHVYDTVVSSVTSGASNLFMIDAPAGTGKTYTE 329          
BLAST of mRNA_H-paniculata_contig47290.11753.1 vs. uniprot
Match: J9LSB3_ACYPI (ATP-dependent DNA helicase n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9LSB3_ACYPI)

HSP 1 Score: 54.3 bits (129), Expect = 1.800e-5
Identity = 38/163 (23.31%), Postives = 78/163 (47.85%), Query Frame = 0
Query:    1 MHPTFKASARARGLITGEEECFICVEDASHFQSHRDLRGL--LITLVLNGGPARRLWDESQDIRFVHFLLRMTLHD---ARHVALREIGLKLLMHGKSNVQVNFPATRNAFDHCSEILFATDHLPLRITERGHTYDTVLAAIHRRRGHPVTIDAPADTGKTFV 158
            +HPTFK++ +A GL+  +E  +  +E+A+  QS R +R L  +I +         LWD+ ++     + +R+   D   A H+A   +   L +   + + ++      ++D  +      ++      E+   Y+ ++ +++   G    +DAP  TGKTF+
Sbjct:  569 VHPTFKSTCKALGLLQDDEHLYAALEEAALCQSPRMIRDLFTIILVFCQVTDPLCLWDKFKEYLSEDYKIRLERQDSVDAEHLADVVLNKCLSVIEDAVLALDEYIKETSYDLVALENVVRNNEESLNDEQKFAYNQIIKSVNNNEGRIYFLDAPGGTGKTFL 731          
BLAST of mRNA_H-paniculata_contig47290.11753.1 vs. uniprot
Match: UPI00100F796F (uncharacterized protein LOC114124164 n=1 Tax=Aphis gossypii TaxID=80765 RepID=UPI00100F796F)

HSP 1 Score: 52.4 bits (124), Expect = 7.460e-5
Identity = 46/187 (24.60%), Postives = 85/187 (45.45%), Query Frame = 0
Query:    1 MHPTFKASARARGLITGEEECFICVEDASHFQSHRDLRGLLITLVL--NGGPARRLWDESQDIRFVHFLLRMTLHD---ARHVALREIGLK----------LLMHGKSNVQVNFPATRNA--FDHCSEILFATDHLPLRIT------------ERGHTYDTVLAAIHRRRGHPVTIDAPADTGKTFV 158
            +HPTFK++ +A GL+  +E  +  +E+A+  QS   +R LL  +++         LWD+ ++    +F +R+   D   A H+A  ++ L           L + G+   +   P   N+  FD+  E L  T +  + +             E+   Y+ ++ +++   G     DAP  TGKTF+
Sbjct:  117 VHPTFKSTCKALGLLEDDEHLYAALEEAALCQSQHMIRDLLTIILVFCQVTDPLCLWDKFKEYLSENFKIRLERQDSVDAEHLA--DVVLNKCLSVIEDAMLALGGQPLKEYGLPQPSNSEQFDN-REYLKETSYDLVALEDVVRNNEESLNDEQKFAYNQIITSVNNNEGRIYFSDAPGGTGKTFL 300          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig47290.11753.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5K9W0_9PHAE2.120e-2938.41Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L0I5_9PHAE1.290e-2435.50ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5JZJ6_9PHAE1.530e-2334.91ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
J9LSB3_ACYPI1.800e-523.31ATP-dependent DNA helicase n=1 Tax=Acyrthosiphon p... [more]
UPI00100F796F7.460e-524.60uncharacterized protein LOC114124164 n=1 Tax=Aphis... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig47290contigH-paniculata_contig47290:20..517 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig47290.11753.1mRNA_H-paniculata_contig47290.11753.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig47290 8..579 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig47290.11753.1 ID=prot_H-paniculata_contig47290.11753.1|Name=mRNA_H-paniculata_contig47290.11753.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=166bp
MHPTFKASARARGLITGEEECFICVEDASHFQSHRDLRGLLITLVLNGGP
ARRLWDESQDIRFVHFLLRMTLHDARHVALREIGLKLLMHGKSNVQVNFP
ATRNAFDHCSEILFATDHLPLRITERGHTYDTVLAAIHRRRGHPVTIDAP
ADTGKTFVEKSFVHA*
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