prot_H-paniculata_contig4724.11746.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4724.11746.1
Unique Nameprot_H-paniculata_contig4724.11746.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length2070
Homology
BLAST of mRNA_H-paniculata_contig4724.11746.1 vs. uniprot
Match: D8LB94_ECTSI (Similar to AHNAK nucleoprotein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB94_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 6.450e-18
Identity = 384/801 (47.94%), Postives = 433/801 (54.06%), Query Frame = 0
Query: 1297 LSGPEVXVKTGDTDISAGLAAAGAATVGAIGVGLGSLVGKGEAEVP--DASVSVEAPSV-DVDVKKPKKGLFGAMFKKSSMREKVSVSVLVRRTSFLLSQISGGDVSLPSASGDVSLPSXXXXXXXXXXXXXXXSASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLSG----------------------PDVXXXXXXXXISAGLAAAGAATVGAIGVGLGSLVGKGEAEVCSSASPVSVEAPSV-DVDVKKPKKGLFGGMFKKPSMSGKVSISVPISGGDVDIXXXXXXXXXXXXXXXXXXXSGDISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLSGPDMD------------------------------------VKTGDTDISAGLAAAGAATVGAIGVGLGSLVGKGEAEVP--DASVSVEAPSVDVDVKKPKKSLFGGMFKKPSMSGKVSMSVPVRRTSFLLSQISAGDVDIP------DVSXXXXXXXXXXXXXXXSGDVSLPQVTXXXXSXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD----------------------------------LSGPDVAVKTGDTDISAGLAAAGAATVGAIGVGLGSLVGKGEAEVPDASVSVEAPSVDVDVK--------------KPKKGLFGGMFKKPSMSGKVSISVLVRRTSFLLSQISAGDVDIPDVS 1979
            ++ P+V V+ GDT ++AGLAA G A VGAIG  +G    K +AE+P  D   SV  P V  VDVKKPKKG+FG +F   S + KV V                 DVS+P  S       XXXXXXXXXXX XXX  +  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            VDL+G                      PDV        ++AGLAA G A VGAIG  +G    K +AE+ S     SV  P V  VDVKKPKKGLFGG+F     SGK  + VP    D D+                   S    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX X XXXXXXXXXXXXXXXXXXXXXXXXXXXXX VD+  P                                       V+ GDT ++AGLAA G A VGAIG  +G    K +AE+P  D   SV  P   VDVKKPKK LFGG+F       K  + VP        + +SA DV +       DVSXXXXXXXXXXXXXXX         +   X XX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    D                                  ++ PDV V+ GDT ++AGLAA G A VGAIG  +G    K +AEV     SV   S D+DVK              KP+KGLFG  FKK  +SGK               ++   DV +PDVS
Sbjct: 1076 MTAPDVKVEGGDTSLTAGLAAGGVAAVGAIGAAVGLSGDKPDAELPSGDVDASVSVPDVPSVDVKKPKKGMFGGLF--GSGKAKVEVP--------------DADVSVPEVSXXXXXXXXXXXXXXXXXXGXXXXXN--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDVPLGSAEAPSVDLAGXXXXXXXXXXXXXXXXXXXXTAPDVKVEGGDTSLTAGLAAGGVAAVGAIGAAVGLSGDKPDAELPSGDVDASVSVPDVPSVDVKKPKKGLFGGLFG----SGKAKVEVP----DADVSVPEV--------------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVDIDAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGGDTSLAAGLAAGGVAAVGAIGAAVGLSGDKPDAELPSGDLDASVSVPDASVDVKKPKKGLFGGLF-----GSKAKIEVPD-------ADVSAPDVTVTVPDMGGDVSXXXXXXXXXXXXXXXXXXXXXXXXSLKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVEMDAPSGXXXXXXXXXAGKMPSVEGGVGGELSSGDVSVTAPDVKVEGGDTSLTAGLAAGGVAAVGAIGAAVGLSGDKPDAEVDAVMPSVGDVSADIDVKMDDVDAKAPSSEILKPRKGLFGLSFKK--LSGKKL-------------KVPDADVAVPDVS 1809          
BLAST of mRNA_H-paniculata_contig4724.11746.1 vs. uniprot
Match: A0A6H5K9M1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M1_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 2.150e-11
Identity = 51/100 (51.00%), Postives = 67/100 (67.00%), Query Frame = 0
Query:  181 DVDLSGPDVDVKTGDTDISAGLAAAGAATVGAIGVGLGSLVGKGEAEVP--DASISVEAPSV-DVDVKKPKKGLFGGM-FKKPSMSGKVSVPSGDVDIPD 276
            DV ++ PDV V+ GDT ++AGLAA+G A VGA+G  +     K +A++P  D   SV  P V  +DVKKP+KGLFGG+ FKKPS+ GK  VP  DV  P+
Sbjct: 1732 DVSVTAPDVKVEGGDTSLTAGLAASGVAAVGAVGAAVDLSGDKPDAKLPSGDVDASVSVPDVPSLDVKKPRKGLFGGLSFKKPSLKGKAMVPDVDVAAPN 1831          
BLAST of mRNA_H-paniculata_contig4724.11746.1 vs. uniprot
Match: A0A6H5JY67_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY67_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 6.950e-6
Identity = 39/86 (45.35%), Postives = 53/86 (61.63%), Query Frame = 0
Query: 1483 VDLSGPDVXXXXXXXXISAGLAAAGAATVGAIGVGLGSLVGKGEAEVCSSASPVSVEAPSVDVDVKKPKKGLFGGM-FKKPSMSGK 1567
            V ++ PDV        ++AGLAA+G A VGAIG  +G    K +AEV S    VS+  P   VD++KP+K LFGG+ FKKP + G+
Sbjct:  745 VSVTAPDVQVEGGDTSLTAGLAASGVAIVGAIGAAVGLSGDKPDAEVPSGVVHVSLSIPEASVDIRKPRKVLFGGLPFKKPPLMGR 830          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4724.11746.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LB94_ECTSI6.450e-1847.94Similar to AHNAK nucleoprotein n=1 Tax=Ectocarpus ... [more]
A0A6H5K9M1_9PHAE2.150e-1151.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JY67_9PHAE6.950e-645.35Protein kinase domain-containing protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025164Putative adhesinPFAMPF13349DUF4097coord: 1074..1251
e-value: 2.8E-7
score: 30.2
NoneNo IPR availablePANTHERPTHR34231FAMILY NOT NAMEDcoord: 914..1007
coord: 286..537
coord: 1970..2063
coord: 1769..1866
coord: 86..179
coord: 1093..1196
coord: 1399..1669
coord: 1166..1276
coord: 641..728
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4724contigH-paniculata_contig4724:158..15326 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4724.11746.1mRNA_H-paniculata_contig4724.11746.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4724 158..15326 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4724.11746.1 ID=prot_H-paniculata_contig4724.11746.1|Name=mRNA_H-paniculata_contig4724.11746.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=2070bp
GDTDISAGLAAAGAATVGAIGVGLGSLVGKGEAEVPDASVSVEAPSVDVD
VKKPKKGLFGGMFKKPSMSAKVSVCRTSFLLSQISAGDVDIPDVSGDVSL
PSASGDVSLPSGDISLPEVSGDVSLPSASGDVSMPGDSGDVSLPSGELSL
PSVSGGVSLPSGGVDVDIPSVSGEVDMPSGDVDLSGPDVDVKTGDTDISA
GLAAAGAATVGAIGVGLGSLVGKGEAEVPDASISVEAPSVDVDVKKPKKG
LFGGMFKKPSMSGKVSVPSGDVDIPDVSGDVSLPSGDISLPEVSGDVSLP
SASGDVSMPGVSGDVSLPSGELSLPSVSGGVSLPSGDVDVDIPSVSGEVD
MPSGDVDLSGPEVDVKKGDTDISADLAAAGAATVGAIGVGLGSLVGKGEA
ELPDASVSVEAPSVDVDVKKPKKGLFRKMFKKPSMSGKVNLSVPISGGDV
DIPDVSGDVSLPSASGDVSLPSGDISLPEVSGDVSLPSASGDVSMPAVSG
DVSLPSGELSLPSVSGGVSLPSGGVDVDIPSVSGEVDITSGDVDLSGPEV
DVKTGDTDISAGLAAAGAATVGAIGVGLGSLVGKGEAEVCGSVTPFLVPD
ASVSVEAPSVDVDVKKPKKGLFGGMFKKPSMSGKVSISGGDVDIPDVSGD
VTLPSAFGDVSLPSGDISLPEVSGDVSLPSASGDVSMPGDSGDVSLPSGE
LSLPSVSGDVSLPSGGVDVDIPSVSGEVDMSSGDVDLSGPDVDMKTGDTD
ISAGLAAAGAATVGAIGVGLGSLVGKGEAEVCGLATPFFVLTIRFGIPFR
FGIRVRYGIHCSLVFRANGCVILEQVPDASVSVEAPSVDVDVKKPKKGLL
GGMFKKPSMSGKVSISVLVRVRCMQGSFSWMIWRGVDHSCMLQQPASSPL
LRCHSPVEGYGISAGDVDIPDVSGDVSLPSASGDVSLPSGDISLPEVSGD
VSLPSASGDVSVPSVSGDVSLPSGELSLPSVSGGVSLPSGGVDVDIPSVS
GEVDMPSGDVDLSGPDVDVKTGDTDISAGLAAAGSATVGAIGVGLGSLVG
KGEAEVPDASVSVEAPSVDVDVKKPKKGLFGGMFKKPSMSGKVSISVPVR
ISAGDVDIPDVSGDVSLPSASGDVSLPSGDISLPEVSGDVSLPSASGDVS
MPSVSGDVSLPSGELSLPSVSGGVSSPSGGVDVDIPSVSGEVDMPSGDIS
GGDVDIPDVSGDVSLPSASGDVSLPSGDISLPEVSGDVSLPSASGDVSMP
AVSGDVSLPSGELSLPSVSGGVSLPSGGVDVDTVSGEVDMPSGDVDLSGP
EVDVKTGDTDISAGLAAAGAATVGAIGVGLGSLVGKGEAEVPDASVSVEA
PSVDVDVKKPKKGLFGAMFKKSSMREKVSVSVLVRRTSFLLSQISGGDVS
LPSASGDVSLPSGDISLPEVSGDVSLPSASGDVSMPAVSGDVSLPSGELS
LPSVSGDVSLPSGGVDVDIPSVSGEVDMPSGDVDLSGPDVDMKTGDMDIS
AGLAAAGAATVGAIGVGLGSLVGKGEAEVCSSASPVSVEAPSVDVDVKKP
KKGLFGGMFKKPSMSGKVSISVPISGGDVDIPDVSGDVSLPSASGDVSLP
SGDISLPEVSGDVSLPSASGDVSMPGVSGDVSLPSGELSLPSVPGGVSLP
SGGVDVDIPSVSGEVDMPSGDVDLSGPDMDVKTGDTDISAGLAAAGAATV
GAIGVGLGSLVGKGEAEVPDASVSVEAPSVDVDVKKPKKSLFGGMFKKPS
MSGKVSMSVPVRRTSFLLSQISAGDVDIPDVSGDVSLPSASGDVSLPSGD
VSLPQVTGDVSSPSASGDVSMPSVSGDVSLPSGELSLPSVSGGVSLPSGG
VDVDIPSVSGEVDMPSGDVDLSGPDVAVKTGDTDISAGLAAAGAATVGAI
GVGLGSLVGKGEAEVPDASVSVEAPSVDVDVKKPKKGLFGGMFKKPSMSG
KVSISVLVRRTSFLLSQISAGDVDIPDVSGDVDIPDVSGDVSLPFGDISL
PEVSGDVSSPSASGDVSVPAVSGDVSLPSGELSLPSVPGDVSLPSGGVDV
DIPSVSGEVDMPSGDVDLSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025164DUF4097