mRNA_H-paniculata_contig4721.11742.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4721.11742.1
Unique NamemRNA_H-paniculata_contig4721.11742.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig4721.11742.1 vs. uniprot
Match: D7FPK1_ECTSI (Cytochrome P450 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPK1_ECTSI)

HSP 1 Score: 225 bits (573), Expect = 2.230e-62
Identity = 147/397 (37.03%), Postives = 211/397 (53.15%), Query Frame = 2
Query:  554 LQPKMEAWADEFGGTYELSLFGTRRIVIVDPAESRRILTQRPGTFGRGPGPNNVDSAGRAVGMCPALFTDEDKAWGRSRRLVAPPFSGH-NVRTMVPAVVKIATRLCAKWSAAAEGNGI-VDAKDDLGHVAHDVIALVAFRHEAKALSATEDDHSVVFDALENMFDNFVAIISSPFLQFAYKYLP-FNGWVRRVEREKAAVRALVKELCENERHLIALEKSPNDDVPLHTNAKAEASEGMLLRKLVEASDVGADGG------RVPMPDDEVVTQARSLFLAGQETTSKTLAWCMYFLSKHPKVLARCREEAVQHISSSDGMVKNFEETTSLTYLTAVMKETLRIKSVVSVLTFWAKSEYTTLDGSTYPRGTSFAILLRYMSTREAYFTRAKEFIPER 1717
            +  ++E WAD+ GG YE++L G R I + DP + RRIL  RP  F RG          R VG+ P+LF +E K WGRSRRL+AP  SGH NV  MVP++ KIA R+CAK     +G G  VD   + G   HD IAL  F  +A ++ AT+D  SV F+A+  + +  +A+   P    A+  L     WVR ++ + + ++ +V+          A++K+ ++      +  A   EG LLRKL+     G+D        R+ + D E+VTQ++ LFLAG ETT+KTL+W +YFL+KHP++  RCREEA++                      A    T  I+      T  ++   T   G     GT+F +LLRY    E  FTRAK+F+PER
Sbjct:   84 MMQQVEGWADDLGGDYEITLIGKRVIFVTDPEDIRRILLLRPSKFKRG---------WRPVGVYPSLFFEEGKEWGRSRRLIAPFLSGHKNVAGMVPSIAKIAERVCAKLG---DGQGEPVDFVQEFGRYTHDAIALSGFGFDADSVRATKDRPSVSFEAMGAIVEAALALSVDPLAMLAWSTLSSLLPWVREIKEKSSRLQRVVEG---------AIDKTRSEMKEAGASHPAGGEEGALLRKLLSVEG-GSDNAIKDVSNRMTLSDKEIVTQSKGLFLAGSETTAKTLSWAVYFLAKHPEMHLRCREEALR----------------------AAPLRTANIERACIATTRRSQETTTMKSGLKLEAGTAFTLLLRYPCLSEHSFTRAKDFVPER 436          
BLAST of mRNA_H-paniculata_contig4721.11742.1 vs. uniprot
Match: UPI001B07BE6D (cytochrome P450 n=1 Tax=Cupriavidus numazuensis TaxID=221992 RepID=UPI001B07BE6D)

HSP 1 Score: 151 bits (381), Expect = 2.900e-35
Identity = 116/388 (29.90%), Postives = 181/388 (46.65%), Query Frame = 2
Query:  566 MEAWADEFGGTYELSLFGTRRIVIVDPAESRRILTQRPGTFGRGPGPNNVDSAGRAVGMCPALFTDEDKAWGRSRRLVAPPFSGHNVRTMVPAVVKIATRLCAKWSAAAEGNGIVDAKDDLGHVAHDVIALVAFRHEAKALSATEDDHSVVFDALENMFDNFVAIISSPFLQFAYKYLPFNGWVRRVEREKAAVRALVKELCENERHLIALEKSPNDDVPLHTNAKAEASEGMLLRKLVEASDVGADGGRVPMPDDEVVTQARSLFLAGQETTSKTLAWCMYFLSKHPKVLARCREEAVQHISSSDGMVKNFEETTSLTYLTAVMKETLRIKSVVSVLTFWAKSEYTTLDGSTYPRGTSFAILLRYMSTREAYFTRAKEFIPERQEQT 1729
            ME WA+ FG  Y ++L G   +V+ D     RIL  RP TF R    + ++   R VG   A F+ E + W R RR V      H++R   P +V +  RL  +W  AA     +  + DL   A DV   +AF H+   L   E     V   LE +       +++PF  + Y  LP +   R  ++  AAVR  +  +    R  +A     + ++  H     EA     +R            G   + DDE+   A +L LAG++TT+ T++W +YF+ +H  V  R R+EA   +  SD ++ +  +   LTYL AV+ E+LR+K V  +  +   ++   + G   P+GT   ++ R  + RE+ F  A  F PER  +T
Sbjct:  161 MEHWAETFGPIYRINLAGRDAVVLSDGEWIDRILHDRPETFRRA---SAIEMLSREVGTVGA-FSAEGETWRRHRRPVVQALDAHHLRDFFPTLVTVTQRLKRRWQHAAASGEPIHVQHDLMQYAVDVTTSLAFGHDMNTL---EGQGGEVQHHLERILPMINRRLNAPFPYWHYIRLPAD---RAFDKSVAAVREAIGGMIVAARERLA----QSQELAAHPRNFLEAMVAAQMR------------GEASLSDDEIFANAFTLLLAGEDTTANTISWVLYFMCRHADVQDRMRDEATAVLGDSD-VLSDIRDAAQLTYLDAVVHESLRLKPVAPLF-YMEPNDDVVVAGYRIPKGTLVVLVTRPNTLRESSFADAAVFRPERWLET 520          
BLAST of mRNA_H-paniculata_contig4721.11742.1 vs. uniprot
Match: A0A3S3R187_9GAMM (Cytochrome P450 n=1 Tax=Photobacterium chitinilyticum TaxID=2485123 RepID=A0A3S3R187_9GAMM)

HSP 1 Score: 149 bits (375), Expect = 4.180e-35
Identity = 117/390 (30.00%), Postives = 192/390 (49.23%), Query Frame = 2
Query:  554 LQPKMEAWADEFGGTYELSLFGTRRIVIVDPAESRRILTQRPGTFGRGPGPNNVDSAGRAVGMCPALFTDEDKAWGRSRRLVAPPFSGHNVRTMVPAVVKIATRLCAKWSAAAEGNGIVDAKDDLGHVAHDVIALVAFRHEAKALSATEDDHSVVFDALENMFDNFVAIISSPFLQFAYKYLPFNGWVRRVEREKAAVRALVKELCENERHLIALEKSPNDDVPLHTNAKAEASEGMLLRKLVEASDVGADGGRVPMPDDEVVTQARSLFLAGQETTSKTLAWCMYFLSKHPKVLARCREEAVQHISSSDGM--VKNFEETTSLTYLTAVMKETLRIKSVVSVLTFWAKSEYTTLDGSTYPRGTSFAILLRYMSTREAYFTRAKEFIPER 1717
            L  ++E WA E+G TY++ + G   +VI DP   + IL +RP +F R     +++   + +G+   L  + + +W R RRL+ P FS  ++ +  P + + + RL  +   +   N  +D  DDL     D+   + F H+ + L   ED   +    LE +F    +    PF  + Y  L  +   R++++    V     ++ +  R  + L+       P   NA        +L+ +V ASD   +  R  + D+E+     +L LAG++TTS  +AW +YFL + P V  +  EEA +  +  +G   V+  EE   LTYL AV +ETLR+KS   +++    SE T LDG+  P GTS  +L R      A+F  A++F PER
Sbjct:   39 LHQQLEQWATEYGDTYKIDIAGMIFVVISDPVVVKDILRRRPKSFNR---TASLERVFKELGIHGVLSANGE-SWKRQRRLIMPAFSKKSLASFFPLLEQTSERLRLRLLQSCSHNTNIDIHDDLRRFTVDITTALVFGHDTRLLEKDEDGLQMY---LEVIFPQLNSRTKMPFPYWQYIKLKKD---RKLDQALVEVEKYAMKIVDQTRSELLLK-------PELANAPVT-----ILQAMVAASD--DEDNR--LSDEELFANILTLLLAGEDTTSNLIAWMLYFLRQMPDVQQKITEEANRVCTMHNGSLCVQGLEE---LTYLEAVARETLRLKSTAPMISAETASEQTLLDGTELPAGTSLFLLTRLGGLNAAHFPDAEQFKPER 399          
BLAST of mRNA_H-paniculata_contig4721.11742.1 vs. uniprot
Match: UPI001F11A12A (cytochrome P450 n=1 Tax=Burkholderia sp. Ac-20365 TaxID=2703897 RepID=UPI001F11A12A)

HSP 1 Score: 147 bits (370), Expect = 1.770e-34
Identity = 110/384 (28.65%), Postives = 189/384 (49.22%), Query Frame = 2
Query:  566 MEAWADEFGGTYELSLFGTRRIVIVDPAESRRILTQRPGTFGRGPGPNNVDSAGRAVGMCPALFTDEDKAWGRSRRLVAPPFSGHNVRTMVPAVVKIATRLCAKWSAAAEGNGIVDAKDDLGHVAHDVIALVAFRHEAKALSATEDDHSVVFDALENMFDNFVAIISSPFLQFAYKYLPFNGWVRRVEREKAAVRALVKELCENERHLIALEKSPNDDVPLHTNAKAEASEGMLLRKLVEASDVGADGGRVPMPDDEVVTQARSLFLAGQETTSKTLAWCMYFLSKHPKVLARCREEAVQHISSSDGMVKNFEETTSLTYLTAVMKETLRIKSVVSVLTFWAKSEYTTLDGSTYPRGTSFAILLRYMSTREAYFTRAKEFIPER 1717
            +E W  E+G  Y   + G   + I DP    ++L  RPGT+ R    + +++    +G+   +F+ E  +W R R+ VA      ++R    ++ ++  RL  +W  AA      D + DL     DV   +AF ++   L   E +  V+   LE +F      +++PF  + Y  LP +   R ++R    V  L KE+    R  +A ++S  D +P  TN             L+EA  +    G  P+ DDEV+    ++ LAG++TT+ T+AW +YF+ +HP V  R +EE V  +   + +++++++  +LTYL AVM ET+R+KSV  V       +    D    P+GT  ++L+R    ++     A++F P+R
Sbjct:   39 LEQWCREYGPIYTFRVVGRTFVAIADPVLINQVLRDRPGTYRRW---DVIETVFDELGIN-GVFSTEGDSWRRQRQFVAKALDPVHLRAFSSSMCEMTRRLLKRWVIAARDQQPFDIRHDLMRYTVDVTTNLAFGYDMDTL---ESEGEVIQRHLEVVFPMVNRRVNTPFPYWHYFRLPAD---RELDRAVKVVHRLTKEIIAVTRARLA-KRSDGDLIP--TN-------------LLEALLMAQHEGEAPLTDDEVLANVFTILLAGEDTTANTIAWIVYFMCRHPDVQRRMQEE-VDSVLGGETVLEDYDKADALTYLDAVMNETMRLKSVAPVQAVQPNHDVQVGDME-IPKGTVLSLLMRQAGLQQGGEPDAQKFDPDR 394          
BLAST of mRNA_H-paniculata_contig4721.11742.1 vs. uniprot
Match: Q6LGK6_PHOPR (Uncharacterized protein n=5 Tax=Photobacterium TaxID=657 RepID=Q6LGK6_PHOPR)

HSP 1 Score: 139 bits (349), Expect = 1.260e-31
Identity = 110/391 (28.13%), Postives = 189/391 (48.34%), Query Frame = 2
Query:  554 LQPKMEAWADEFGGTYELSLFGTRRIVIVDPAESRRILTQRPGTFGRGPGPNNVDSAGRAVGMCPALFTDEDKAWGRSRRLVAPPFSGHNVRTMVPAVVKIATRLCAKWSAAAEGNGIVDAKDDLGHVAHDVIALVAFRHEAKALSATEDDHSVVFDALENMFDNFVAIISSPFLQFAYKYLPFNGWVRRVEREKAAVRALVKELCENERHLIALEKSPNDDVPLHTNAKAEASEGMLLRKLVEASDVGADGGRVPMPDDEVVTQARSLFLAGQETTSKTLAWCMYFLSKHPKVLARCREEAVQHISSSDGMVKNFEETTSLTYLTAVMKETLRIKSVVSVLTFWAKSEYTTLDGSTYPRGTSFAILLRYMSTREAYFTRAKEFIPERQEQ 1726
            L   +E W  E+G TY++ + G   +VI DP   + IL +RP +F R     +++   + +G+   L  + + +W R RRL+ P FS  ++ +  P + +   RL  +      G   +   DDL     D+   + F H+ + L   E D   +   LE +F    +    PF    ++Y+ F              R L + L E E++ + + +   D++  +    A+A E  +L+ +V ASD   D  R  + ++E+     +L LAG++TTS  +AW +YF+S+ P +  +  EEA Q      G + N +    LTYL AV +ETLR+KS   +++     + T LDG+  P GT   ++ R     + +F  A++F PER ++
Sbjct:   39 LHQVLEQWCLEYGDTYKVDIAGLLFVVIADPVVVKDILRRRPKSFNR---TASLERVFKELGIHGVLSANGE-SWKRQRRLIMPAFSKKSLASFFPLLEQTTERLRLRL-VKKRGQDTLAIHDDLRRFTVDITTSLVFGHDTRLL---EHDGDGLQKHLEVIFPQLNSRTRMPFPY--WQYIKFKK-----------DRKLDQALIEVEKYALKIVEQTRDELQFNPQL-ADAPE-TILQAMVAASD---DDNR--LTNEELFANILTLLLAGEDTTSNLIAWMLYFISQRPDIQCKINEEAEQIRLKHKGQI-NVQGLDELTYLEAVARETLRLKSTAPMISAETADQVTLLDGTELPAGTGLFLMTRLGGLNKEHFKDAEQFRPERWQE 400          
BLAST of mRNA_H-paniculata_contig4721.11742.1 vs. uniprot
Match: A0A1M6LS86_9BACT (Cytochrome P450 n=4 Tax=Reichenbachiella TaxID=156993 RepID=A0A1M6LS86_9BACT)

HSP 1 Score: 136 bits (343), Expect = 8.280e-31
Identity = 106/384 (27.60%), Postives = 184/384 (47.92%), Query Frame = 2
Query:  566 MEAWADEFGGTYELSLFGTRRIVIVDPAESRRILTQRPGTFGRGPGPNNVDSAGRAVGMCPALFTDEDKAWGRSRRLVAPPFSGHNVRTMVPAVVKIATRLCAKWSAAAEGNGIVDAKDDLGHVAHDVIALVAFRHEAKALSATEDDHSVVFDALENMFDNFVAIISSPFLQFAYKYLPFNGWVRRVEREKAAVRALVKELCENERHLIALEKSPNDDVPLHTNAKAEASEGMLLRKLVEASDVGADGGRVPMPDDEVVTQARSLFLAGQETTSKTLAWCMYFLSKHPKVLARCREEAVQHISSSDGMVKNFEETTSLTYLTAVMKETLRIKSVVSVLTFWAKSEYTTLDGSTYPRGTSFAILLRYMSTREAYFTRAKEFIPER 1717
            ME W +E G  + +SL G + IV   P  ++ IL  RPG F R    + ++   + +G+   +F  E +AW + R +     +  NV    P + K+A RL  KW+A A+    +D + ++     D+   +AF +    L   ED   V+   LE +F    A I++P        LP    ++  +++KA   A+V E+      LI   K    + P   +      E +L+++  E +            DDEV     ++ LAG++TTS +++W +Y+L+++P ++ + R+EA   I  +      +EE ++LTY  AV++E+LRIK V   L +    E   ++G  + +G +  +  +   T    F R  EF+PER
Sbjct:   50 MERWVEEVGDLFTISLLGKKFIVSAKPEINKEILRLRPGKFRRF---DKIEEILKEMGIL-GVFNAEGEAWRKHRLITMQALNRQNVEGFFPTISKVADRLWTKWNAMAQAGETIDVQKEMMRYTVDITTEIAFGYPMNTLEKGED---VIQTHLEKIFPMINARITAP--------LPLWRLIKS-KKDKAFDTAMV-EIKSTVHQLIEEGKKRLVEHPEIKDHPNNFLEALLVQQANEGT----------FSDDEVFGNVFTMLLAGEDTTSNSISWSLYYLAQNPAIVDKIRQEA-NDIYGNSHTPSTYEEASALTYTDAVVQESLRIKPVTPNL-YMTALEDVEIEGYLFQKGETIMMQNKVAQTHPDNFIRPDEFMPER 404          
BLAST of mRNA_H-paniculata_contig4721.11742.1 vs. uniprot
Match: A0A542LN79_9BURK (Cytochrome P450 n=1 Tax=Herbaspirillum sp. SJZ107 TaxID=2572881 RepID=A0A542LN79_9BURK)

HSP 1 Score: 135 bits (340), Expect = 1.780e-30
Identity = 112/392 (28.57%), Postives = 177/392 (45.15%), Query Frame = 2
Query:  554 LQPKMEAWADEFGGTYELSLFGTRRIVIVDPAESRRILTQRPGTFGRGPGPNNVDSAGRAVGMCPALFTDEDKAWGRSRRLVAPPFSGHNVRTMVPAVVKIATRLCAKWSAAAEGNGIVDAKDDLGHVAHDVIALVAFRHEAKALSATEDDHSVVFDALENMFDNFVAIIS----SPFLQFAYKYLPFNGWVRRVEREKAAVRALVKELCENERHLIALEKSPNDDVPLHTNAKAEASEGMLLRKLVEASDVGADGGRVPMPDDEVVTQARSLFLAGQETTSKTLAWCMYFLSKHPKVLARCREEAVQHISSSDGMVKNFEETTSLTYLTAVMKETLRIKSVVSVLTFWAKSEYTTLDGSTYPRGTSFAILLRYMSTREAYFTRAKEFIPER 1717
            L   ME WA  +G  + ++L  T  +V+ D     ++L +RP TF R   P+        +G    LF  E   W   RR+V   F+ H V+   P++V++A RL  +W+AAA     +D   +L     D+IA +AF  +   +   ++       A++   D  +  ++    +PF  + Y  LP +    R+ER  A VR+   EL E  R  +  + S           +AE    ML   L  A+  G+      +   EV     +  LAG++TTS +LAW ++ L  HP+V AR R E        D +    E+  SL ++ A   E LR+K   + L F A ++ TT+      +GT    ++R  S  EA    A +F P+R
Sbjct:   38 LHQDMEHWARAYGPLFRVALGRTPMLVVADHTLIAQVLRERPATFRR---PSATARVAEELGGIDGLFEAEGSDWRNQRRMVMQAFAPHAVKAYFPSLVQVARRLQRRWAAAARAGRALDLGAELRLYTIDIIAGLAFGTDVNTIETGDN-------AIQRNLDAILPAVARRTLAPFPYWRYLKLPRDY---RLERSVAMVRSAAAELVERARERMRADPS-----------RAEQPRNMLEAMLAAAAQAGSG-----VSAREVAGNVLTTLLAGEDTTSNSLAWLIWLLHTHPQVQARARAEVQAVAPDLDALT--IEQMDSLDFIEACASEALRLKPPAAFLPFEALAD-TTVGDVQIGQGTLVWCVMRSSSVDEARVANAAQFDPQR 397          
BLAST of mRNA_H-paniculata_contig4721.11742.1 vs. uniprot
Match: UPI001F3D2C22 (cytochrome P450 n=1 Tax=Paraburkholderia kururiensis TaxID=984307 RepID=UPI001F3D2C22)

HSP 1 Score: 136 bits (343), Expect = 2.800e-30
Identity = 106/384 (27.60%), Postives = 177/384 (46.09%), Query Frame = 2
Query:  566 MEAWADEFGGTYELSLFGTRRIVIVDPAESRRILTQRPGTFGRGPGPNNVDSAGRAVGMCPALFTDEDKAWGRSRRLVAPPFSGHNVRTMVPAVVKIATRLCAKWSAAAEGNGIVDAKDDLGHVAHDVIALVAFRHEAKALSATEDDHSVVFDALENMFDNFVAIISSPFLQFAYKYLPFNGWVRRVEREKAAVRALVKELCENERHLIALEKSPNDDVPLHTNAKAEASEGMLLRKLVEASDVGADGGRVPMPDDEVVTQARSLFLAGQETTSKTLAWCMYFLSKHPKVLARCREEAVQHISSSDGMVKNFEETTSLTYLTAVMKETLRIKSVVSVLTFWAKSEYTTLDGSTYPRGTSFAILLRYMSTREAYFTRAKEFIPER 1717
             E+W  +FG  Y+  +     I I +PA   ++L  RP T+ R  G   +++  + +G+   +FT+ D  W R RR+V+  F    +R+  P +  I  RL  +W   A     +D  +DL   A +VI    F      +     D   +   LE +F        +PF  + Y  LP +   R+++R   ++R L  +L  + R              L   A++++    ++  L+ A +         + DDEV+  A SL LAG++TT+ T++W MYFL +HP V  R + E V  ++++ G     +   +L YL  V+ ET+R+K VV V +F   ++   L G + P GT   +L R  S  +        F P+R
Sbjct:  171 FESWRRQFGPIYKYRVMNRPAIAIAEPALISQVLRDRPETYRRWDG---LETVVKEIGLDGIIFTEGD-TWRRQRRIVSAAFRPERLRSFSPVLSAITGRLLKRWEKEAVNERSIDILNDLTQYAAEVITSFTF---GAGMGTARSDGEAIHRHLEIVFPMINRRSIAPFPHWRYVKLPAD---RKLDRAMTSIRTLTAKLIASARSR------------LRQRAESDSHPTNVIEALLCAPE--------RLTDDEVLANALSLLLAGEDTTANTISWIMYFLCRHPDVQMRLQSE-VDSVAAAVGDADTLDAIDNLRYLDCVINETMRLKPVVPVSSFQPINDIQ-LGGISIPGGTMITLLTRDTSLYQDIGVDLHTFKPDR 522          
BLAST of mRNA_H-paniculata_contig4721.11742.1 vs. uniprot
Match: UPI001E61C09D (cytochrome P450 n=1 Tax=Massilia rhizosphaerae TaxID=2784389 RepID=UPI001E61C09D)

HSP 1 Score: 134 bits (337), Expect = 6.180e-30
Identity = 108/388 (27.84%), Postives = 178/388 (45.88%), Query Frame = 2
Query:  554 LQPKMEAWADEFGGTYELSLFGTRRIVIVDPAESRRILTQRPGTFGRGPGPNNVDSAGRAVGMCPALFTDEDKAWGRSRRLVAPPFSGHNVRTMVPAVVKIATRLCAKWSAAAEGNGIVDAKDDLGHVAHDVIALVAFRHEAKALSATEDDHSVVFDALENMFDNFVAIISSPFLQFAYKYLPFNGWVRRVEREKAAVRALVKELCENERHLIALEKSPNDDVPLHTNAKAEASEGMLLRKLVEASDVGADGGRVPMPDDEVVTQARSLFLAGQETTSKTLAWCMYFLSKHPKVLARCREEAVQHISSSDGMVKNFEETTSLTYLTAVMKETLRIKSVVSVLTFWAKSEYTTLDGSTYPRGTSFAILLRYMSTREAYFTRAKEFIPER 1717
            L   ME WA + G  + +       +V+ DP    ++L +RP TF R   P  + +    +G  P LF  E  AW   RR+V   F+ H V++  P++V++A RL  +W  AA     +D   DL   + D++A +AF  +   +   E+  +V+   L+ +          PF  + Y  LP +   RR+ER  A +R  V +L +  +  + L+            A+A     ML   L  A+  G+      + + EV     ++ LAG++TTS +LAW ++ L +HP  L R ++E ++   S D +    E+   L +L A  +E++R+K     +T  A  E T +      +GT    L+R  S     F  A +F P R
Sbjct:   51 LHRTMEQWARKHGPVFRVKFPTGAFLVVADPDLVGKVLRERPDTFRR---PTVLSAVAAELGAMPGLFDSEGAAWRDQRRMVMQAFAPHAVKSYFPSLVQVARRLQRRWENAAATGQAIDLGGDLRLYSVDIVAGLAFGTDVNTI---ENGDNVIQRNLDAILPGVARRTLMPFPYWRYVKLPAD---RRLERGIAVLRDAVTDLVKQAKQRMLLDP-----------ARAVNPPNMLEAMLAAAAQGGSG-----VTEAEVAGNVTTMLLAGEDTTSNSLAWLIWLLYRHPDALRRAQDEVLRCAPSLDALT--LEQVDRLDFLEACTQESMRLKPAAPFITAEAL-EGTVVGDVAIEKGTIVLCLMRDTSPDNTRFENAAQFDPGR 410          
BLAST of mRNA_H-paniculata_contig4721.11742.1 vs. uniprot
Match: UPI00162AD8B3 (cytochrome P450 n=1 Tax=Fulvivirga aurantia TaxID=2529383 RepID=UPI00162AD8B3)

HSP 1 Score: 130 bits (327), Expect = 8.510e-29
Identity = 105/386 (27.20%), Postives = 178/386 (46.11%), Query Frame = 2
Query:  566 MEAWADEFGGTYELSLFGTRRIVIVDPAESRRILTQRPGTFGRGPGPNNVDSAGRAVGMCPALFTDEDKAWGRSRRLVAPPFSGHNVRTMVPAVVKIATRLCAKWSAAAEGNGIVDAKDDLGHVAHDVIALVAFRHEAKALSATEDDHSVVFDALENMFDNFVAIISSPFLQFAY-KYLPFNGWVRRVEREKAAVRALVKELCENERHLIALEKSPNDDVPLHTNAKAEASEGMLLRKL-VEASDVGADGGRVPMPDDEVVTQARSLFLAGQETTSKTLAWCMYFLSKHPKVLARCREEAVQHISSSDGMVKNFEETTSLTYLTAVMKETLRIKSVVSVLTFWAKSEYTTLDGSTYPRGTSFAILLRYMSTREAYFTRAKEFIPER 1717
            +EAWA E G  Y++SL G + IV  DP  ++ IL +RP  F R      +D     +G+   +F  E + W   R+L +   +  NV+   P + ++  RL  +W   AE N  +D + ++     D+   +AF ++   L   +D   V+ D +E +F      I++P   + Y K      + + +E     V   + E  E                 L  NA  +A+    L  L VE S  G       + D E+     ++ LAG++TTS +++W +++L +HP+V  + REEA + +        + EE  ++ Y  AV  E +R+K V   L   A  + T ++G    +G +  +  +   T +A+FT A +FIPER
Sbjct:   34 LEAWAKEVGNVYKISLMGKKFIVSADPDLNQEILKRRPDAFRRF---GKIDEIMSEMGIL-GVFNAEGEQWKIHRKLTSEALNLKNVQGFFPTLQRVTHRLHDRWLKLAEQNDTIDVQKEMVRYTVDITTDIAFGYDINTLQKEKD---VIQDQMEKVFPMINERITAPIPLWRYFKSKKDKAFDQAIESIVKLVHEFIAEARER----------------LKDNADLQANPTNFLEALLVEQSSSGL------LSDKEIFGNVFTILLAGEDTTSNSISWTLFYLLQHPEVFQKVREEAGR-VCGDKLCPSSNEELAAMRYTEAVAMEAMRLKPVTPNLYMEALKDVT-VNGLFIKKGMTVMMQNKVAQTDDAHFTNADQFIPER 388          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4721.11742.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPK1_ECTSI2.230e-6237.03Cytochrome P450 n=1 Tax=Ectocarpus siliculosus Tax... [more]
UPI001B07BE6D2.900e-3529.90cytochrome P450 n=1 Tax=Cupriavidus numazuensis Ta... [more]
A0A3S3R187_9GAMM4.180e-3530.00Cytochrome P450 n=1 Tax=Photobacterium chitinilyti... [more]
UPI001F11A12A1.770e-3428.65cytochrome P450 n=1 Tax=Burkholderia sp. Ac-20365 ... [more]
Q6LGK6_PHOPR1.260e-3128.13Uncharacterized protein n=5 Tax=Photobacterium Tax... [more]
A0A1M6LS86_9BACT8.280e-3127.60Cytochrome P450 n=4 Tax=Reichenbachiella TaxID=156... [more]
A0A542LN79_9BURK1.780e-3028.57Cytochrome P450 n=1 Tax=Herbaspirillum sp. SJZ107 ... [more]
UPI001F3D2C222.800e-3027.60cytochrome P450 n=1 Tax=Paraburkholderia kururiens... [more]
UPI001E61C09D6.180e-3027.84cytochrome P450 n=1 Tax=Massilia rhizosphaerae Tax... [more]
UPI00162AD8B38.510e-2927.20cytochrome P450 n=1 Tax=Fulvivirga aurantia TaxID=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4721contigH-paniculata_contig4721:8239..15207 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score252.3
Seed ortholog evalue3.8e-64
Seed eggNOG ortholog2880.D8LC30
KEGG koko:K15388,ko:K21446
Hectar predicted targeting categoryother localisation
EggNOG free text desc.iron ion binding
EggNOG OGsCOG2124@1,KOG0158@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01008
Exons9
Model size1885
Cds size1203
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930404.3880217-UTR-H-paniculata_contig4721:8238..88031622930404.3880217-UTR-H-paniculata_contig4721:8238..8803Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4721 8239..8803 +
1691481276.4278378-UTR-H-paniculata_contig4721:8238..88031691481276.4278378-UTR-H-paniculata_contig4721:8238..8803Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4721 8239..8803 +
1622930404.5705729-UTR-H-paniculata_contig4721:15090..152071622930404.5705729-UTR-H-paniculata_contig4721:15090..15207Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4721 15091..15207 +
1691481276.5394897-UTR-H-paniculata_contig4721:15090..152071691481276.5394897-UTR-H-paniculata_contig4721:15090..15207Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4721 15091..15207 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930404.4046726-CDS-H-paniculata_contig4721:8803..89441622930404.4046726-CDS-H-paniculata_contig4721:8803..8944Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4721 8804..8944 +
1691481276.4412532-CDS-H-paniculata_contig4721:8803..89441691481276.4412532-CDS-H-paniculata_contig4721:8803..8944Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4721 8804..8944 +
1622930404.4231105-CDS-H-paniculata_contig4721:10057..102041622930404.4231105-CDS-H-paniculata_contig4721:10057..10204Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4721 10058..10204 +
1691481276.451253-CDS-H-paniculata_contig4721:10057..102041691481276.451253-CDS-H-paniculata_contig4721:10057..10204Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4721 10058..10204 +
1622930404.435054-CDS-H-paniculata_contig4721:10735..108111622930404.435054-CDS-H-paniculata_contig4721:10735..10811Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4721 10736..10811 +
1691481276.4611104-CDS-H-paniculata_contig4721:10735..108111691481276.4611104-CDS-H-paniculata_contig4721:10735..10811Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4721 10736..10811 +
1622930404.451075-CDS-H-paniculata_contig4721:11476..116271622930404.451075-CDS-H-paniculata_contig4721:11476..11627Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4721 11477..11627 +
1691481276.4722602-CDS-H-paniculata_contig4721:11476..116271691481276.4722602-CDS-H-paniculata_contig4721:11476..11627Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4721 11477..11627 +
1622930404.4740186-CDS-H-paniculata_contig4721:12713..127951622930404.4740186-CDS-H-paniculata_contig4721:12713..12795Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4721 12714..12795 +
1691481276.4827616-CDS-H-paniculata_contig4721:12713..127951691481276.4827616-CDS-H-paniculata_contig4721:12713..12795Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4721 12714..12795 +
1622930404.4903972-CDS-H-paniculata_contig4721:13213..134071622930404.4903972-CDS-H-paniculata_contig4721:13213..13407Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4721 13214..13407 +
1691481276.4960737-CDS-H-paniculata_contig4721:13213..134071691481276.4960737-CDS-H-paniculata_contig4721:13213..13407Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4721 13214..13407 +
1622930404.5070193-CDS-H-paniculata_contig4721:13934..140571622930404.5070193-CDS-H-paniculata_contig4721:13934..14057Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4721 13935..14057 +
1691481276.5062869-CDS-H-paniculata_contig4721:13934..140571691481276.5062869-CDS-H-paniculata_contig4721:13934..14057Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4721 13935..14057 +
1622930404.5307896-CDS-H-paniculata_contig4721:14461..145761622930404.5307896-CDS-H-paniculata_contig4721:14461..14576Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4721 14462..14576 +
1691481276.5160336-CDS-H-paniculata_contig4721:14461..145761691481276.5160336-CDS-H-paniculata_contig4721:14461..14576Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4721 14462..14576 +
1622930404.5461643-CDS-H-paniculata_contig4721:14916..150901622930404.5461643-CDS-H-paniculata_contig4721:14916..15090Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4721 14917..15090 +
1691481276.527813-CDS-H-paniculata_contig4721:14916..150901691481276.527813-CDS-H-paniculata_contig4721:14916..15090Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4721 14917..15090 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4721.11742.1prot_H-paniculata_contig4721.11742.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4721 8804..15090 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4721.11742.1

>prot_H-paniculata_contig4721.11742.1 ID=prot_H-paniculata_contig4721.11742.1|Name=mRNA_H-paniculata_contig4721.11742.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=401bp
MEAWADEFGGTYELSLFGTRRIVIVDPAESRRILTQRPGTFGRGPGPNNV
DSAGRAVGMCPALFTDEDKAWGRSRRLVAPPFSGHNVRTMVPAVVKIATR
LCAKWSAAAEGNGIVDAKDDLGHVAHDVIALVAFRHEAKALSATEDDHSV
VFDALENMFDNFVAIISSPFLQFAYKYLPFNGWVRRVEREKAAVRALVKE
LCENERHLIALEKSPNDDVPLHTNAKAEASEGMLLRKLVEASDVGADGGR
VPMPDDEVVTQARSLFLAGQETTSKTLAWCMYFLSKHPKVLARCREEAVQ
HISSSDGMVKNFEETTSLTYLTAVMKETLRIKSVVSVLTFWAKSEYTTLD
GSTYPRGTSFAILLRYMSTREAYFTRAKEFIPERQEQTYTIHHTLSIENN
*
back to top

mRNA from alignment at H-paniculata_contig4721:8239..15207+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4721.11742.1 ID=mRNA_H-paniculata_contig4721.11742.1|Name=mRNA_H-paniculata_contig4721.11742.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6969bp|location=Sequence derived from alignment at H-paniculata_contig4721:8239..15207+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGACCTTGAACCACGACAAATCAAAGTGTGATGTGAAGCCCTAACGCGTA GCTACTACCGGTTCGTGATGGCCCCAGCGATAACCACACCACGGGGGAAT AGGAGGCCGACTTGAACAAAACTCGCGGTTCTCCGTATATCGCATCACCA TCGCTCCCGACGCGTACGATCTTCAGCGCTGACGATAGATATTCATAAGG GGCGTCAGCCTGTGCAGCGTGTTCCCTCTGCATGAATGTAGCGCGAGGTA TCCATGATTGTTGCTCCCGAAGAAGAAATTGGGGAATTAATCTCATATCT GTACACTTTTGCATTTTTTTTGTTTAGTGTAAAATTATACGACAGGCAGC AGATAACACCGAGAGCGTCCATCCATACACGACAATCAATTGATGGAAGG ATTGGGCCGCGGAATCGCTCGCGTTATTTGTCCTCCTCGGGATGTGTAAT CGATGACTACCCTGCAGCAAGTAACAGGACTGTGGTGGACTTCAATTTAG TACGCAAGAGTTGATACGTCCCCCGATAATTATCGTGATCCCGCGCATCG TAGCTCCAACCGAAGATGGAGGCGTGGGCGGATGAGTTCGGCGGCACCTA CGAGCTGTCCTTGTTTGGAACACGAAGGATAGTCATCGTCGACCCAGCCG AGAGCCGCCGCATATTGACCCAGCGTCCAGGAACCTTTGGACGCGGCCCT GGCCCTGTGAGTATGGGCCTGAGCTTCGAATAATAACTCACCAGGTCATG ACAAAACCGATAAATTATATACCGAAGCAGAGCGTTGGTGAACTTGCCAG CACAGGTACAGTTTTCTCTCTGTGACAACGAGAATTATACGGATGACCAC CCTTTCCTGCTGAAACATGTAGACCAGAAAAAAGGTACACCTTGCAATCA AACATAACACCATCCAGTTAGTGTTTGCATTTGCTGTCAAATTTCTCATG TGTGTCCAAGTTTGTCTCCCCTTTCTTCCATGTACTTGTCTTGTGGTAAG TGGCCGCCACCGTTTCAGTGGAAGACACGAATTCGTTGGGGAAGTCTTTC GATGAAAACCCGCCGAGCTGAGCTAAAGCTCCCTGAGACGATGAATTATC GGATACCACTTTCGCCCGAAATTTAGGCTACATTTGAAATGTCCAAAATA TAACTAACATGTGCAGATACAGCTGTAGGTGGTGCTGCTGCAGGTGCTCA AAAAGCACAAACTAAATCCCGTAGCATTATCGTTGTCGAGGGGGAAACAT TTACTACGTGGCCAGTAATTATGCCTTCTCCTATTGAGGTGGGCTAGATC ATGACGGTATATATAGATCAGTTTTCTACTCGTCATACTCGTCATACTAT CGTAGCGGGACGGTTTGTCAATATGTAGCAATCTCTCTTTTTCATCCACT TGTCCTGACCCAAATTCGAACATGCCTGGATTCTCGCTGTTTCCCCTCTT GACGCACTCCTCCTATCTACAACACTGTCGTCTCACATTCATGGAATAGG AAATATCTTGGTTGTGGACCTAAAAATTCAGTTGTGTTTCTCGCTGTCGC CATAGTTTTTTACAGCTGTCGTTAAACCTCCCTGCAATGATTTTGTTTCG GGCATCATGCTGTCGCGGTTCAGTGTGTTGGCGTCTTTGAGGGAGACACA CTTTTCAGCGCCTGGTTGCCCTCTAACACCACACACTGTGATGGTTCTGC TGAGACGGGGAGCTACGGTGATTTTACGTCAAGTATCCTACACCTTAATA TTTTCTCTTGCGAGCATGACTTCTGGTGGATGACTGGGGTCCTTCTGCGT TGTTTTATCCTCTTTCTAGAACAACGTCGACTCGGCCGGCAGAGCGGTGG GCATGTGTCCAGCTCTCTTCACGGACGAGGATAAGGCGTGGGGGCGCTCG CGCCGGCTTGTTGCACCTCCTTTCAGTGGACATAACGTGCGGACCATGGT GCCTGCAGTGGTGAAGGTGTGTCTAGTAGTAGTTTATATGGCAGCGCGCA AAAGACAGTTCGGTATACTAGATGTATGAAGGGCAATTTATGGTGCCTGC TTGGGGCGTACTTGCGGTTGAGTCTTGGGGCGTTTTTTCTTGCATTGTAG TCCCGAAGATACGCTTTAGAACCATTTGGACTATTTCCGTTTTTTCGTGT CCTTGACGTTTTCATGAGCCTGAACATGTACCGATCCAGCGGAGTTTTGA TGCATTGCGGTACGGCAGTTCGTTTCTCTACTCTTAGAGCGGGGCTTGTT GTCTGTACCGTATGCAATCTATTTATTCTCTTTCAATGTTGGAACCTATC TGGCAAGCTATTCCAGTCACAATCAGGAGATGTTTGAGTGCACCTCAGAA GCCAAGTCGATTTTTTACTGTAACAATATTCGCTCTAGTGTTTCTTGCCC CGTCCCGCCCCTCCCCTCCCTGTTCCTCTCCCTCCGTTTATCTTTTCTCT GCACCTCCGTATCGTATGTTGTTATGCGTACGCGATGAATGGCATAGATC GCTACGCGTCTTTGCGCCAAATGGTCCGCGGCTGCGGAAGGCAATGGGAT TGTGGATGCGAAAGATGACCTCGGTTAAGTACGAGGAGCCCACGTACAAA ATATTTCCAAAGCACACCTATTTCCCTGCGATATATTCGCGGTTTTCTCG CAAGAAATTAAAAAAGACCAGCTCGGGCGGCGTTACGATGCGTTACATGA CGGGCAATAAAGGCGTGCAAGCAATGTTTGGTGTTGGATCCTACGATATG CTTGCTGTGATGTGTAGGGCAATCCTCAATTGGTACTCCTGAATTGGCCA TCGAGCCAATCGTATAATCACATTGAGCGCGTTTGATGCACGCCAAAATG AGCTGCGAACTTGATAGGCACGGGTCCAAAACGCTTGGTAGCTCTAGGCG ATAACGGTGCAGCTTATTGTCGCCGTTCGGTATCTGAATGTACCTTACAC TGTTGTTTTCATTCTATATGCTTTACTATTTTTTGGCGATTATTCAGTAC GCATGTTACAACTATGAGGATACCTCCGCATTGTTTGTCTCTATGTTACG CATGTAGTGTAGAGCTGCTATTCTTACACCTTGAAGACGAGGAAACCCGA ACATCTGATTTACAAGGGATGAAAAAAGGTTCAATTTGTCATAATATATA TATATATAAATGCGTCTCGAAAAAGGACACCCCCCGTGCTCTCGGCCACC GCTGGCCCACCCCCTTGTTTCCGTCATCTGGTCTGCAGGTCACGTTGCGC ACGATGTAATCGCCCTGGTAGCATTCCGACATGAGGCGAAGGCTTTATCG GCGACCGAGGACGACCACAGCGTTGTCTTCGATGCGCTAGAGAACATGTT CGACAACTTCGTCGCCATTATATCGTCCCCCTTCCTCCAGTAAGGCGCCA GTGCTACCGAGATTTCCAGCATGTAGCACCCCGGAGTGATGAATTAAGGG TGACAAGTGTTCAGATTCGATTTTATCGGGGGTTTTTTGTGATGCTGATG CTCGGTCTACAACCCTGGAGAAAAGCAAATAACCTTTGCAAGGATAAAGC CGGTGAATTAACACAAACAGCAAGCGGTGGTTACGTGATACCAGTACATT ATTGTGGGCAATGACTATGTAGTGGAAAAGAACCATAGGTGAAGTGAATC TTAATACATGTGCTGAACGAAAGCAACTCAAACAGCGGCAGTTTCACAAA CTTGTTCCGTATCTTTCAAAGAGGTACCGCGGTTTCACAGTGTATGAACA CGCCTGGTGATGCTTGTTTTCTACACCATCTTTTCTTGGGAAACAACACC TTCATATGTCGAAAAGAGGCCGTTTATCGATTCATCTCAACGAAGTCTTC GCCAACACCACAAATTTTGGTGTAAAAAATGTCAGCATGTGTGCAGTAGG CACTCGACAAATGATGCTATATAGTATGTTGATATTTTCATTATCATTCT TCCCCCCCAAATCGATCATTCATCAAGAAACACCTTCTACACACTGCCGT CCAATTAATGCGTAGGAGTAGCCCGCGGGGCGTTCAGATGGCGTTTCTTC CCCATGCATTAGTCGTGGACTTTGCAGTAAACAAGCTGGACTCATCTGAA TACACCAGTAGTCTAAAACCATCACCTCGACACGTACCTCTCCCCATCGG CTTATACCGCAGCACGTCGTGTTTAGGAAAACCTCTATATTGTTGCACCA CGGGGCATTCTAGACTAGGCGTGCTTCCGGGGCTTTCATAGTGCCTCACG CAGTCCGAACCAACTGCCGACCTTGGGATCATGGCCAAGCTCCCCCACAG GATATCTCTGTTCATGTCGATTTTGCTGTGCTAAAAAGGGGCTATGTTTT GGAGCTATCGGGATGTTTGCCCTTGTTTCATGAACTGCCCACCAAGACTA CTAGATAATGATGATACATAGGGGGGGACGTTGTTGATGTGCGTTGTTCC CTCGTTTTTTCCGACTCGAAACAAGGTTTGCCTACAAGTATCTTCCGTTC AATGGTTGGGTGAGGAGAGTGGAACGGGAGAAGGCGGCCGTCAGAGCGCT CGTCAAGGTAAGGAAGGTATCGACGAAGGCAGTTCGAAAGCGTTCCAACT TTCGGCTTTTGAGGTGTCGGTTTCGTTTCTCGACGTGGTTAGCTAAACAG CGACAATAAGAATATATACACTGGTGGTATGGACCATGATTGCAGCTGTT GTAGGGAGGGAGGGAGAAGGTTATGTTGACAATTGTGTACACTTATCGGG CAAAATCATATCCGGAAGGGGAGAGGTTCTGGTGACCTTTAAATTTGTTC TTAGTTACTTGCACGTTTTTTGTCGTGGTTTGCTGGGTGTTACGGTAGAC ATGATGCTAAACTTTCCCGCCCCCGTGTTGTCTAGTTGTGTCACTTGTTC CATGCCAAGCCAGCCATACAGACAGCACGTGTTTTTGTTACTCTCTTTCA CATCAACCCCTTTGTCTTTTTCAAGGAACTCTGCGAGAACGAGAGGCATC TCATCGCTCTCGAGAAAAGCCCCAATGACGATGTCCCATTGCACACTAAT GCGAAAGCCGAAGCCTCTGAAGGCATGCTCCTGAGGAAGTTGGTGGAAGC TAGTGACGTCGGCGCGGATGGGGGGCGCGTACCGATGCCAGACGATGAGG TAGTCACCCAGGCCAGAAGGTGTGTTTTGTTTCTGTTCGGTAATTTTGGC ATGTACATTTTTGTCGTCCATTTTTGCCCTCTCCTAGTACAGGAGATGGT TGGCACTAACTCGGGCATCAAGATTACGGCGAAATGAAGCTTGCGGGATG TTGGTGGTGTTGACGGTGTTACAAAAATGACGAGGCCCATCGACTATCCG CGCCTCTGCGGTATGCGAGTCTAGCTCGAACATTCTTTTGTTATTGTTTT CGTTTCAAGCATGCTGTGTTTGTTGGAACATTTAGTTTTAGCGAGTCCTC GAGGTTTGTTGCAGGCCGCGAGCACCTCGAGCGAAATGTCGATATCGGGA CCTAGCTTACCGTAGTCAAGCCGGCCTCACTGTCCTGCCATTTCGTGGAC CCGGTGTCATACTCGTCCCGCTCCGGTAACATCTTTTATCGACTCTGTCC GTTAGCGTTTTGGTATGCCCACGCGATGTGTGCGTTTTCTTGAGCTTCCG TCAAAAATTATTTCCCGTGACGTTTGTGGCCTATCGTCGTGCTCAGCTTG TTCCTCGCCGGTCAAGAGACCACCTCCAAGACGCTGGCGTGGTGCATGTA CTTCCTGTCTAAGCATCCCAAAGTACTTGCCCGGTGCAGAGAAGAAGCCG TGCAACACATATCTTCCAGGTAGCAGCTGGGGAACTTTCTCTTTGCGAAA TCAAACATTCAACTTTTGTTGATGTAAAATTTGACCAGGACTGGCCAAGC AAGAGAACAGACATGGTGATTACATTAGCTCTTTATGTGTGTGTGTGTGT GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCAGGGGGGCTCTGG CATTTTGCCAATAGTTTCCATGTAGCAAGCCTGTGGTTTTACATTTACAA TTTCGTTTTTGTCGGCTGTAGAGAATTTTTGTGTCTTGTGTCTCCTCCAC ACCTTTAAAATTGTGAGCTTTTTTGCTGTCCCCGAACTTGTCCCAAGGTT TGCCCCGAACTTGTCCTGATGCATTGTGCACTCTCCTCGTGGACTTTGGC TTGCCGTTTTCTTGCCTTGGCAGCGATGGAATGGTCAAAAACTTCGAAGA GACAACTTCTCTTACCTATCTCACAGCCGTCATGAAGGAGACCTTGAGGA TAAAAAGTGTCGTGTCGGTGTTGACCTTCTGGGCAAAGGTAATCATTGAA CCCGACATCGGCGGAGGGTTGAAAATATTGTTTCCTGGGTTTCAATCGGT TGAGTCTTGACCGCTCGTAAATTACGAGGCCTAAGCAAATCAGGGGGCTT TTGTTGTTTTTTCGGGAGTATCTAATTGGCGATTTCATGACTGGTGTTGC GAGGAAAAACTACGGCCGGCGTGATTAGTACTGATGGCTCGCTTTGTTAT ACTTAATGGTGTTTTTGGTGCTCTTCGTAGCGCCGAGACAACCCTCTCTT TTTCTCCCTGTTGTGAGTGTTTCATGCTGTTGTGTGATGCGACCGTGCGA TTTTTTGTGTGCAATTACCCGAGGACAGTCGGAGTATACGACGCTGGATG GCTCGACCTATCCTAGAGGTACTTCCTTCGCCATCCTGCTTCGGTACATG TCCACGAGGGAGGCCTACTTCACCAGAGCGAAAGAATTTATTCCCGAGAG GCAAGAACAAACCTACACCATTCATCACACGCTGAGCATCGAAAATAACT AATATTTCGATATGAAACCGATACCTTCAGCACCGACTTTTCCCTCCGCT GTGCTGCGTGTCACTGTCATCACGCAGAATACACTTTTTTTTTTTCTTTT TTTTTAACCCCCGGAAGGC
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig4721:8239..15207+

>mRNA_H-paniculata_contig4721.11742.1 ID=mRNA_H-paniculata_contig4721.11742.1|Name=mRNA_H-paniculata_contig4721.11742.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2406bp|location=Sequence derived from alignment at H-paniculata_contig4721:8239..15207+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGGCGTGGGCGGATGAGTTCGGCGGCACCTACGAGCTGTCCTTGTT
TGGAACACGAAGGATAGTCATCGTCGACCCAGCCGAGAGCCGCCGCATAT
TGACCCAGCGTCCAGGAACCTTTGGACGCGGCCCTGGCCCTATGGAGGCG
TGGGCGGATGAGTTCGGCGGCACCTACGAGCTGTCCTTGTTTGGAACACG
AAGGATAGTCATCGTCGACCCAGCCGAGAGCCGCCGCATATTGACCCAGC
GTCCAGGAACCTTTGGACGCGGCCCTGGCCCTAACAACGTCGACTCGGCC
GGCAGAGCGGTGGGCATGTGTCCAGCTCTCTTCACGGACGAGGATAAGGC
GTGGGGGCGCTCGCGCCGGCTTGTTGCACCTCCTTTCAGTGGACATAACG
TGCGGACCATGGTGCCTGCAGTGGTGAAGAACAACGTCGACTCGGCCGGC
AGAGCGGTGGGCATGTGTCCAGCTCTCTTCACGGACGAGGATAAGGCGTG
GGGGCGCTCGCGCCGGCTTGTTGCACCTCCTTTCAGTGGACATAACGTGC
GGACCATGGTGCCTGCAGTGGTGAAGATCGCTACGCGTCTTTGCGCCAAA
TGGTCCGCGGCTGCGGAAGGCAATGGGATTGTGGATGCGAAAGATGACCT
CGATCGCTACGCGTCTTTGCGCCAAATGGTCCGCGGCTGCGGAAGGCAAT
GGGATTGTGGATGCGAAAGATGACCTCGGTCACGTTGCGCACGATGTAAT
CGCCCTGGTAGCATTCCGACATGAGGCGAAGGCTTTATCGGCGACCGAGG
ACGACCACAGCGTTGTCTTCGATGCGCTAGAGAACATGTTCGACAACTTC
GTCGCCATTATATCGTCCCCCTTCCTCCAGTCACGTTGCGCACGATGTAA
TCGCCCTGGTAGCATTCCGACATGAGGCGAAGGCTTTATCGGCGACCGAG
GACGACCACAGCGTTGTCTTCGATGCGCTAGAGAACATGTTCGACAACTT
CGTCGCCATTATATCGTCCCCCTTCCTCCAGTTTGCCTACAAGTATCTTC
CGTTCAATGGTTGGGTGAGGAGAGTGGAACGGGAGAAGGCGGCCGTCAGA
GCGCTCGTCAAGGTTTGCCTACAAGTATCTTCCGTTCAATGGTTGGGTGA
GGAGAGTGGAACGGGAGAAGGCGGCCGTCAGAGCGCTCGTCAAGGAACTC
TGCGAGAACGAGAGGCATCTCATCGCTCTCGAGAAAAGCCCCAATGACGA
TGTCCCATTGCACACTAATGCGAAAGCCGAAGCCTCTGAAGGCATGCTCC
TGAGGAAGTTGGTGGAAGCTAGTGACGTCGGCGCGGATGGGGGGCGCGTA
CCGATGCCAGACGATGAGGTAGTCACCCAGGCCAGAAGGAACTCTGCGAG
AACGAGAGGCATCTCATCGCTCTCGAGAAAAGCCCCAATGACGATGTCCC
ATTGCACACTAATGCGAAAGCCGAAGCCTCTGAAGGCATGCTCCTGAGGA
AGTTGGTGGAAGCTAGTGACGTCGGCGCGGATGGGGGGCGCGTACCGATG
CCAGACGATGAGGTAGTCACCCAGGCCAGAAGCTTGTTCCTCGCCGGTCA
AGAGACCACCTCCAAGACGCTGGCGTGGTGCATGTACTTCCTGTCTAAGC
ATCCCAAAGTACTTGCCCGGTGCAGAGAAGAAGCCGTGCAACACATATCT
TCCAGCTTGTTCCTCGCCGGTCAAGAGACCACCTCCAAGACGCTGGCGTG
GTGCATGTACTTCCTGTCTAAGCATCCCAAAGTACTTGCCCGGTGCAGAG
AAGAAGCCGTGCAACACATATCTTCCAGCGATGGAATGGTCAAAAACTTC
GAAGAGACAACTTCTCTTACCTATCTCACAGCCGTCATGAAGGAGACCTT
GAGGATAAAAAGTGTCGTGTCGGTGTTGACCTTCTGGGCAAAGCGATGGA
ATGGTCAAAAACTTCGAAGAGACAACTTCTCTTACCTATCTCACAGCCGT
CATGAAGGAGACCTTGAGGATAAAAAGTGTCGTGTCGGTGTTGACCTTCT
GGGCAAAGTCGGAGTATACGACGCTGGATGGCTCGACCTATCCTAGAGGT
ACTTCCTTCGCCATCCTGCTTCGGTACATGTCCACGAGGGAGGCCTACTT
CACCAGAGCGAAAGAATTTATTCCCGAGAGGCAAGAACAAACCTACACCA
TTCATCACACGCTGAGCATCGAAAATAACTAATCGGAGTATACGACGCTG
GATGGCTCGACCTATCCTAGAGGTACTTCCTTCGCCATCCTGCTTCGGTA
CATGTCCACGAGGGAGGCCTACTTCACCAGAGCGAAAGAATTTATTCCCG
AGAGGCAAGAACAAACCTACACCATTCATCACACGCTGAGCATCGAAAAT
AACTAA
back to top