mRNA_H-paniculata_contig470.11706.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig470.11706.1 vs. uniprot
Match: D7G7T9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7T9_ECTSI) HSP 1 Score: 351 bits (901), Expect = 1.670e-107 Identity = 239/577 (41.42%), Postives = 319/577 (55.29%), Query Frame = 2
Query: 188 VSEMSSRLEEGWTLLNQTCPVPGCHTALLRDTRKDAHGEVFCVKCEKQCITAEQAKAM-TLKCGSKVFDLHSAGPDILSKPQLYTPPPAEDPATTANATPKSTRSSAPSESAAI----QASRASAEERMGEKLLLGWTMLADMCSTPDCCFPLMQDRTGIRVCVSC-GSKALPTQQGVDPKAGDAGLAKANDSLRVPVSSVSLTTRDSDGGXXXXXXXXXXXXGGEGAILSKVEFARVRKRRDEVSAALGRYMMQGWAMLEKKCTREGCGPGTPLLKERGTGRLYCVGCQMYSDVDGELGSAGGSQEAATSVSTPLPLKRGSSG-RDHGALTVDATS------AVAEVEPLQVESEYEISERVRLRKQAAREQENNLTGVS-AGLGQRLLQGWAMLSTPCPTRGCNSPLMRDKKGSVSCVSCKNTAADKLKASQ----------------TADEVMENDETGEADRDREMLDDDSVRMYSKRRVAELTVSRVAT----DTVRGAAVVEVGARGTGEVVEHARIKANALDTVYKAIDMSERRLRCCTGEGV--TAIDVDESSRQAELLTKLAMAAQAL 1810
V E+S RL+EGWTLLNQ CP+P C T LLRD +K +V+C KC+ CIT E+AK++ + C S AG + +K Q D ATT S AA Q SRA+AE MGEKLL GWTMLA+ C T CCFPLM+DR + CV+C G+ + + G+D + AG + S P S+VS SD ++S+ +FA VRK+RD +SA+LGRYM+QGW++ +K C REGC PGTPLLK+R TG YC GC +G +G A+ LPLKR SSG R G VD A+ + +VESEYE++ER RLRKQAAREQ + GVS A L QRLLQGWAMLST CP C++PLMRD+ G CVSC +A Q D E + + + D ML D + R+Y++RR+AE+ + A +T R V R G ++ +R+K ALDT+Y+A+D+S++RLR + +++DVDES RQA+L+ KLA+AA+A+
Sbjct: 9 VPEISKRLQEGWTLLNQHCPMPNCGTPLLRDHKK----KVYCAKCKMYCITPEEAKSLGSPTCASPA----GAGEGMATKSQDAL---GSDAATTGAVRGLSRGQDRQQPRAAPGPTKQQSRAAAEAAMGEKLLQGWTMLAEECETAGCCFPLMRDRGRVTRCVACDGNASAAAKDGLDDRVA-AGQFEDPTSAAAPASTVSAPKPPSDSSSITAARTEP--------VMSEEQFAAVRKKRDALSASLGRYMLQGWSLSDKTCPREGCEPGTPLLKDRSTGVFYCAGCDTRGTCEGGVGGLVDESSTASGAKARLPLKRDSSGERSRGPPRVDEDGPGLPNPGSAKTKTPEVESEYEVAERARLRKQAAREQSRD--GVSSATLAQRLLQGWAMLSTTCPAPECHNPLMRDRTGREQCVSCSRGSAPAAAGRQGTAAAGAAXXTAPVQAAGDFAGEKETENDEEEDEAMLGDGAGRIYTERRMAEILAAPAAAAAPAETSRATTV-----RADGIPLDPSRVKDQALDTLYRALDLSQQRLRAGFSQSPLESSVDVDESMRQADLIAKLAVAARAV 558
BLAST of mRNA_H-paniculata_contig470.11706.1 vs. uniprot
Match: A0A024TL27_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TL27_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.170e-14 Identity = 52/171 (30.41%), Postives = 76/171 (44.44%), Query Frame = 2
Query: 542 SAEERMGEKLLLGWTMLADMCSTPDCCFPLMQDRTGIR--VCVSCGSKALPTQQGVDPKAGDAGLAKANDSLRVPVSSVSLTTRDSDGGXXXXXXXXXXXXGGEGAILSKVEFARVRKRRDEVSAALGRYMMQGWAMLEKKCTREGCGPGTPLLKERGTGRLYCVGCQMYS 1048
SA + EK+L GWT+LA C P CC PL+ R + +CV C Q V ++ A + PV + + T +D + +A +KRRD S+ LG M+QGW ++ C C GTP ++ R TG+L+CV C Y+
Sbjct: 5 SASNLLAEKMLAGWTLLATNCPEPSCCTPLVSSRKDMTRLLCVKCDKWYSTEQPAVVIESAPTSKASQEST---PVPTANQTPQDDEA----------------------TAYAARKKRRDATSSKLGEKMLQGWTLMGSVCPISDC--GTPFVRHRETGQLFCVTCDRYA 148
BLAST of mRNA_H-paniculata_contig470.11706.1 vs. uniprot
Match: A0A024TL25_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TL25_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.980e-14 Identity = 54/175 (30.86%), Postives = 80/175 (45.71%), Query Frame = 2
Query: 542 SAEERMGEKLLLGWTMLADMCSTPDCCFPLMQDRTGIR--VCVSCGSKALPTQQGVDPKAGDAGLAKANDSLR----VPVSSVSLTTRDSDGGXXXXXXXXXXXXGGEGAILSKVEFARVRKRRDEVSAALGRYMMQGWAMLEKKCTREGCGPGTPLLKERGTGRLYCVGCQMYS 1048
SA + EK+L GWT+LA C P CC PL+ R + +CV C Q V ++ A +KA+ + PV + + T +D + +A +KRRD S+ LG M+QGW ++ C C GTP ++ R TG+L+CV C Y+
Sbjct: 5 SASNLLAEKMLAGWTLLATNCPEPSCCTPLVSSRKDMTRLLCVKCDKWYSTEQPAVVIES--APTSKASQGIHQLESTPVPTANQTPQDDEA----------------------TAYAARKKRRDATSSKLGEKMLQGWTLMGSVCPISDC--GTPFVRHRETGQLFCVTCDRYA 153
BLAST of mRNA_H-paniculata_contig470.11706.1 vs. uniprot
Match: W4FHQ0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FHQ0_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 5.940e-11 Identity = 64/168 (38.10%), Postives = 82/168 (48.81%), Query Frame = 2
Query: 554 RMGEKLLLGWTMLADMCSTPDCCFPLM---QDRTGIRVCVSCGSKALPTQQGVDPKAGDAGLAKANDSLRVPVSSVSLTTRDSDGGXXXXXXXXXXXXGGEGAILSKVEFARVRKRRDEVSAALGRYMMQGWAMLEKKCTREGCGPGTPLLKERGTGRLYCVGCQMYS 1048
R+ EK+L GWT+LA C DCC PLM +D+T + +CV C K T++ A S P SS T XXXXXXXXXXXX RD S+ LG M+QGW ++ C R C GTP ++ R TG+L+CV C Y+
Sbjct: 9 RLAEKMLAGWTLLATNCPELDCCTPLMCSRKDKTKL-LCVKC-DKWYSTEE------------PAETSAATPTSSAPQATPHPXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXRDATSSKLGEKMLQGWTLMGSVCPRPDC--GTPFVRNRDTGQLFCVTCNQYA 156
BLAST of mRNA_H-paniculata_contig470.11706.1 vs. uniprot
Match: W4FFT7_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FFT7_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 9.860e-11 Identity = 64/168 (38.10%), Postives = 82/168 (48.81%), Query Frame = 2
Query: 554 RMGEKLLLGWTMLADMCSTPDCCFPLM---QDRTGIRVCVSCGSKALPTQQGVDPKAGDAGLAKANDSLRVPVSSVSLTTRDSDGGXXXXXXXXXXXXGGEGAILSKVEFARVRKRRDEVSAALGRYMMQGWAMLEKKCTREGCGPGTPLLKERGTGRLYCVGCQMYS 1048
R+ EK+L GWT+LA C DCC PLM +D+T + +CV C K T++ A S P SS T XXXXXXXXXXXX RD S+ LG M+QGW ++ C R C GTP ++ R TG+L+CV C Y+
Sbjct: 9 RLAEKMLAGWTLLATNCPELDCCTPLMCSRKDKTKL-LCVKC-DKWYSTEE------------PAETSAATPTSSAPQATPHPXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXRDATSSKLGEKMLQGWTLMGSVCPRPDC--GTPFVRNRDTGQLFCVTCNQYA 156
BLAST of mRNA_H-paniculata_contig470.11706.1 vs. uniprot
Match: A0A067CN19_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CN19_SAPPC) HSP 1 Score: 68.6 bits (166), Expect = 2.510e-9 Identity = 48/173 (27.75%), Postives = 74/173 (42.77%), Query Frame = 2
Query: 554 RMGEKLLLGWTMLADMCSTPDCCFPLMQDRTGIR--VCVSCGSKALPTQQGVDPKAGDAGLAKANDSLRVPVSSVSLTTRDSDGGXXXXXXXXXXXXGGEGAILSKVEFARVRKRRDEVSAALGRYMMQGWAMLEKKCTREGCGPGTPLLKERGTGRLYCVGCQMYSDVDGEL 1066
RM EK+LLGW +LA+ C +C PLM + CV C + T+ LA N+S + P V ++ + + + +K+RD SA +G M+QGW +L C C PL++ R G++YCV C+ Y + E+
Sbjct: 10 RMSEKMLLGWALLAETCPVDECYTPLMSTKKQAHKVYCVKC-ERWFSTE-----------LAAKNESPKAPEPKVEAAKVEAPW---------------QESEAEAAAYREKKKKRDAASAKMGEKMLQGWTLLGLHCPVPEC--LMPLMRSR-EGQMYCVNCEQYVMTEEEM 152
BLAST of mRNA_H-paniculata_contig470.11706.1 vs. uniprot
Match: A0A067BF98_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BF98_SAPPC) HSP 1 Score: 66.6 bits (161), Expect = 2.460e-8 Identity = 47/173 (27.17%), Postives = 74/173 (42.77%), Query Frame = 2
Query: 554 RMGEKLLLGWTMLADMCSTPDCCFPLMQDRTGIR--VCVSCGSKALPTQQGVDPKAGDAGLAKANDSLRVPVSSVSLTTRDSDGGXXXXXXXXXXXXGGEGAILSKVEFARVRKRRDEVSAALGRYMMQGWAMLEKKCTREGCGPGTPLLKERGTGRLYCVGCQMYSDVDGEL 1066
RM EK+LLGW +LA+ C +C PLM + CV C + T+ LA ++S + P V ++ + + + +K+RD SA +G M+QGW +L C C PL++ R G++YCV C+ Y + E+
Sbjct: 5 RMSEKMLLGWALLAETCPVDECYTPLMSTKKQAHKVYCVKC-ERWFSTE-----------LAAKSESPKAPEPKVEAAKVEAPW---------------QESEAEAAAYREKKKKRDAASAKMGEKMLQGWTLLGLHCPVPEC--LMPLMRSR-EGQMYCVNCEQYVMTEEEM 147
BLAST of mRNA_H-paniculata_contig470.11706.1 vs. uniprot
Match: F4RTX7_MELLP (Uncharacterized protein n=1 Tax=Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) TaxID=747676 RepID=F4RTX7_MELLP) HSP 1 Score: 63.5 bits (153), Expect = 1.240e-7 Identity = 53/168 (31.55%), Postives = 76/168 (45.24%), Query Frame = 2
Query: 890 RRDEVSAALGRYMMQGWAMLEKKCTREGCGPGTPLLKERGTGRLYCVGCQMYSDVDGELGSAGGSQEAATSVSTPLPLKRGSSGRDHGALTV-DATSAVAEVEPLQVESEYEISERVRLRKQAAREQENNLTGVSAGLGQRLLQGWAMLSTPCPTRGCNS-PLMRDKK 1387
+ +VSA LGRYM+QGW + + C + C G PL++ + G +C C D S GS A S+ P +S LT+ + T A E+E + E+ E RL+ A S+ +G LLQGW +L + C C + PLMR K
Sbjct: 4 KTSDVSAILGRYMLQGWTLTDVNCPKSDC-IGCPLMRSK-AGSEFCARCDGGPREDKPNASPSGSSTA--SIPDPNQTHSRTSTPPTPILTIQEETEANQELEAFNPIASPEVLESRRLQSDLA----------SSRIGSLLLQGWTLLDSSCQNLTCWAIPLMRSPK 157
BLAST of mRNA_H-paniculata_contig470.11706.1 vs. uniprot
Match: A0A6G0X910_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X910_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 1.720e-6 Identity = 48/187 (25.67%), Postives = 81/187 (43.32%), Query Frame = 2
Query: 896 DEVSAALGRYMMQGWAMLEKKCTREGCGPGTPLLK-ERGTGRLYCVGCQMYSDVDGELGSAGGSQEAATSVSTPLPLKRGSSGRDHGALTVDATSAVAEVEPLQVESEYEISERVRLRKQAAREQENNLTGVSAGLGQRLLQGWAMLSTPCPTRGCNSPLMRDKKGSVSCVSCKNTAADKLKASQTA 1453
D+ S L M+QGW +L C C TPL+ ++ R+ CV C + + TP P+++ + S E++P YE AR + + T S LG+++LQGWA+++ CP C +P +R+++G + CV+C A + + + TA
Sbjct: 3 DDTSGRLAEKMLQGWTLLAVNCPEPHC--CTPLVSSKKDKTRVLCVKCDKWYSTEPPA--------QPELPHTPQPVQQ------------EVKSDANEIDP-----SYE-----------ARRKRRDAT--SNKLGEKMLQGWALMNQVCPKADCGTPFVRNREGKLYCVTCDQFAMTEEQVAATA 149
BLAST of mRNA_H-paniculata_contig470.11706.1 vs. uniprot
Match: A0A4P9ZUH7_9FUNG (Uncharacterized protein n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZUH7_9FUNG) HSP 1 Score: 61.6 bits (148), Expect = 2.030e-6 Identity = 49/179 (27.37%), Postives = 83/179 (46.37%), Query Frame = 2
Query: 896 DEVSAALGRYMMQGWAMLEKKCTREGCGPGTPLLKERGTGRLYCVGCQMYSDVDGELGSAGGSQEAATSVSTPLPLKRGSSGRDHGALTVDATSAVAEVEPLQVESEYEISERVRLRKQAAREQENNLTGVSAGLGQRLLQGWAMLSTPCPTRGC-NSPLMRDKKGSVSCVSCKNTAAD 1429
D ++ AL RYM+QGW + + +C + GC G PL++ + + R CV C SQ A S P P + + S A+ V+ +++ ++ A R++ L +G++LLQG+A+L CP GC ++PL++ K + CV+C + D
Sbjct: 4 DFITTALSRYMLQGWVLTDTECPK-GC--GVPLVRTKDSSRSICVRCDE-------------SQSATVSSPAPAPTQVAAPXXXXXXXXXXXXSEEAD----DVKFTPSATQKTQM---AQRDRAAKL------IGEKLLQGYALLDDSCPNPGCFSTPLVQKKNQARFCVTCSSQIMD 153 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig470.11706.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig470.11706.1 >prot_H-paniculata_contig470.11706.1 ID=prot_H-paniculata_contig470.11706.1|Name=mRNA_H-paniculata_contig470.11706.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=571bp MVLTAPVETPGDVKIVRPPDCCSRIRVSEMSSRLEEGWTLLNQTCPVPGCback to top mRNA from alignment at H-paniculata_contig470:18282..26701- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig470.11706.1 ID=mRNA_H-paniculata_contig470.11706.1|Name=mRNA_H-paniculata_contig470.11706.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8420bp|location=Sequence derived from alignment at H-paniculata_contig470:18282..26701- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig470:18282..26701- >mRNA_H-paniculata_contig470.11706.1 ID=mRNA_H-paniculata_contig470.11706.1|Name=mRNA_H-paniculata_contig470.11706.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3426bp|location=Sequence derived from alignment at H-paniculata_contig470:18282..26701- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |